RNA–Protein interactions for RNA: ENST00000252456.6

CNN1-201, Transcript of calponin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNN1, Length 1,633 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN1-201ENST00000252456 ZNF749O43361 778 aa13.66□□□□□ -0.22
CNN1-201ENST00000252456 RHOXF2BP0C7M4 288 aa13.66□□□□□ -0.22
CNN1-201ENST00000252456 GMPRP36959 345 aa13.66□□□□□ -0.22
CNN1-201ENST00000252456 TBPL1P62380 186 aa13.66□□□□□ -0.22
CNN1-201ENST00000252456 PRDX1Q06830 199 aaKnown RBP13.66□□□□□ -0.22
CNN1-201ENST00000252456 NAB1Q13506 487 aa13.66□□□□□ -0.22
CNN1-201ENST00000252456 COL9A2Q14055 689 aaPredicted RBP13.66□□□□□ -0.22
CNN1-201ENST00000252456 GRTP1Q5TC63 336 aa13.66□□□□□ -0.22
CNN1-201ENST00000252456 ICE2Q659A1 982 aa13.66□□□□□ -0.22
CNN1-201ENST00000252456 ZNF385CQ66K41 422 aaPredicted RBP13.66□□□□□ -0.22
CNN1-201ENST00000252456 ZNF425Q6IV72 752 aa13.66□□□□□ -0.22
CNN1-201ENST00000252456 FAM199XQ6PEV8 388 aaPredicted RBP13.66□□□□□ -0.22
CNN1-201ENST00000252456 AGTRAPQ6RW13 159 aa13.66□□□□□ -0.22
CNN1-201ENST00000252456 ZUFSPQ96AP4 578 aa13.66□□□□□ -0.22
CNN1-201ENST00000252456 SLC45A3Q96JT2 553 aa13.66□□□□□ -0.22
CNN1-201ENST00000252456 LRFN5Q96NI6 719 aa13.66□□□□□ -0.22
CNN1-201ENST00000252456 ZNF285Q96NJ3 590 aa13.66□□□□□ -0.22
CNN1-201ENST00000252456 RUFY1Q96T51 708 aa13.66□□□□□ -0.22
CNN1-201ENST00000252456 RHOXF2Q9BQY4 288 aa13.66□□□□□ -0.22
CNN1-201ENST00000252456 DPH7Q9BTV6 452 aa13.66□□□□□ -0.22
CNN1-201ENST00000252456 ACSS3Q9H6R3 686 aa13.66□□□□□ -0.22
CNN1-201ENST00000252456 ANKZF1Q9H8Y5 726 aa13.66□□□□□ -0.22
CNN1-201ENST00000252456 ACTR5Q9H9F9 607 aaPredicted RBP13.66□□□□□ -0.22
CNN1-201ENST00000252456 GPN2Q9H9Y4 310 aaPredicted RBP13.66□□□□□ -0.22
CNN1-201ENST00000252456 GPAMQ9HCL2 828 aa13.66□□□□□ -0.22
CNN1-201ENST00000252456 ENAMQ9NRM1 1142 aa13.66□□□□□ -0.22
CNN1-201ENST00000252456 PCMTD2Q9NV79 361 aa13.66□□□□□ -0.22
CNN1-201ENST00000252456 INTS7Q9NVH2 962 aaKnown RBP13.66□□□□□ -0.22
CNN1-201ENST00000252456 SERTAD3Q9UJW9 196 aa13.66□□□□□ -0.22
CNN1-201ENST00000252456 CROTQ9UKG9 612 aa13.66□□□□□ -0.22
CNN1-201ENST00000252456 PLCL2Q9UPR0 1127 aa13.66□□□□□ -0.22
CNN1-201ENST00000252456 PIEZO2Q9H5I5 2752 aa13.66□□□□□ -0.22
CNN1-201ENST00000252456 ATRXP46100 2492 aa13.66□□□□□ -0.22
CNN1-201ENST00000252456 NPEPPSL1A6NEC2 478 aa13.65□□□□□ -0.22
CNN1-201ENST00000252456 ZNF839A8K0R7 811 aa13.65□□□□□ -0.22
CNN1-201ENST00000252456 E7EQ34 232 aa13.65□□□□□ -0.22
CNN1-201ENST00000252456 OR2B3O76000 313 aa13.65□□□□□ -0.22
CNN1-201ENST00000252456 MT-ND3P03897 115 aa13.65□□□□□ -0.22
CNN1-201ENST00000252456 RPA3P35244 121 aaPredicted RBP13.65□□□□□ -0.22
CNN1-201ENST00000252456 SPRP35270 261 aaPredicted RBP13.65□□□□□ -0.22
CNN1-201ENST00000252456 CSRP3P50461 194 aa13.65□□□□□ -0.22
CNN1-201ENST00000252456 TSTA3Q13630 321 aaPredicted RBP13.65□□□□□ -0.22
CNN1-201ENST00000252456 USP10Q14694 798 aaKnown RBP13.65□□□□□ -0.22
CNN1-201ENST00000252456 LCN10Q6JVE6 187 aa13.65□□□□□ -0.22
CNN1-201ENST00000252456 CEP128Q6ZU80 1094 aa13.65□□□□□ -0.22
CNN1-201ENST00000252456 RNF44Q7L0R7 432 aa13.65□□□□□ -0.22
CNN1-201ENST00000252456 MCATQ8IVS2 390 aaKnown RBP13.65□□□□□ -0.22
CNN1-201ENST00000252456 DSELQ8IZU8 1212 aa13.65□□□□□ -0.22
CNN1-201ENST00000252456 NKAPQ8N5F7 415 aaKnown RBP13.65□□□□□ -0.22
CNN1-201ENST00000252456 CT55Q8WUE5 264 aa13.65□□□□□ -0.22
CNN1-201ENST00000252456 SGPP1Q9BX95 441 aa13.65□□□□□ -0.22
CNN1-201ENST00000252456 TSPYL1Q9H0U9 437 aa13.65□□□□□ -0.22
CNN1-201ENST00000252456 ARGLU1Q9NWB6 273 aaPredicted RBP13.65□□□□□ -0.22
CNN1-201ENST00000252456 CUEDC1Q9NWM3 386 aaPredicted RBP13.65□□□□□ -0.22
CNN1-201ENST00000252456 PADI1Q9ULC6 663 aa13.65□□□□□ -0.22
CNN1-201ENST00000252456 SH2B3Q9UQQ2 575 aa13.65□□□□□ -0.22
CNN1-201ENST00000252456 MRPS18BQ9Y676 258 aaKnown RBP13.65□□□□□ -0.22
CNN1-201ENST00000252456 MEN1O00255 615 aa13.64□□□□□ -0.23
CNN1-201ENST00000252456 ZSCAN9O15535 394 aaPredicted RBP13.64□□□□□ -0.23
CNN1-201ENST00000252456 ACSL3O95573 720 aa13.64□□□□□ -0.23
CNN1-201ENST00000252456 ENO2P09104 434 aaPredicted RBP13.64□□□□□ -0.23
CNN1-201ENST00000252456 CMPK1P30085 196 aa13.64□□□□□ -0.23
CNN1-201ENST00000252456 DLSTP36957 453 aa13.64□□□□□ -0.23
CNN1-201ENST00000252456 AP1S2P56377 157 aa13.64□□□□□ -0.23
CNN1-201ENST00000252456 CYP4F2P78329 520 aa13.64□□□□□ -0.23
CNN1-201ENST00000252456 FRMPD2BQ6IN97 320 aa13.64□□□□□ -0.23
CNN1-201ENST00000252456 PCSK4Q6UW60 755 aa13.64□□□□□ -0.23
CNN1-201ENST00000252456 CMC1Q7Z7K0 106 aa13.64□□□□□ -0.23
CNN1-201ENST00000252456 PAQR7Q86WK9 346 aa13.64□□□□□ -0.23
CNN1-201ENST00000252456 IFT20Q8IY31 132 aa13.64□□□□□ -0.23
CNN1-201ENST00000252456 GPR135Q8IZ08 494 aa13.64□□□□□ -0.23
CNN1-201ENST00000252456 SPATA6LQ8N4H0 392 aa13.64□□□□□ -0.23
CNN1-201ENST00000252456 UBXN10Q96LJ8 280 aa13.64□□□□□ -0.23
CNN1-201ENST00000252456 CYTH2Q99418 400 aa13.64□□□□□ -0.23
CNN1-201ENST00000252456 PLCD4Q9BRC7 762 aa13.64□□□□□ -0.23
CNN1-201ENST00000252456 PARD6BQ9BYG5 372 aa13.64□□□□□ -0.23
CNN1-201ENST00000252456 UNKQ9C0B0 810 aaKnown RBP13.64□□□□□ -0.23
CNN1-201ENST00000252456 DERL2Q9GZP9 239 aa13.64□□□□□ -0.23
CNN1-201ENST00000252456 ATG10Q9H0Y0 220 aa13.64□□□□□ -0.23
CNN1-201ENST00000252456 MRPS30Q9NP92 439 aaKnown RBP13.64□□□□□ -0.23
CNN1-201ENST00000252456 CCDC177Q9NQR7 707 aaPredicted RBP13.64□□□□□ -0.23
CNN1-201ENST00000252456 ARL15Q9NXU5 204 aa13.64□□□□□ -0.23
CNN1-201ENST00000252456 NOVA2Q9UNW9 492 aaKnown RBP13.64□□□□□ -0.23
CNN1-201ENST00000252456 CCDC88CQ9P219 2028 aa13.64□□□□□ -0.23
CNN1-201ENST00000252456 LOC105369274A0A096LPK9 316 aa13.64□□□□□ -0.23
CNN1-201ENST00000252456 LOC102723532A0A0G2JNH3 316 aa13.64□□□□□ -0.23
CNN1-201ENST00000252456 CAPN1P07384 714 aa13.64□□□□□ -0.23
CNN1-201ENST00000252456 SLC35E2BP0CK96 405 aa13.64□□□□□ -0.23
CNN1-201ENST00000252456 STMN1P16949 149 aa13.64□□□□□ -0.23
CNN1-201ENST00000252456 RAB10P61026 200 aa13.64□□□□□ -0.23
CNN1-201ENST00000252456 NAE1Q13564 534 aa13.64□□□□□ -0.23
CNN1-201ENST00000252456 TSNQ15631 228 aaKnown RBP13.64□□□□□ -0.23
CNN1-201ENST00000252456 RHBDD2Q6NTF9 364 aa13.64□□□□□ -0.23
CNN1-201ENST00000252456 FBXO42Q6P3S6 717 aa13.64□□□□□ -0.23
CNN1-201ENST00000252456 FAM198BQ6UWH4 519 aa13.64□□□□□ -0.23
CNN1-201ENST00000252456 OR4N4Q8N0Y3 316 aa13.64□□□□□ -0.23
CNN1-201ENST00000252456 ZNF655Q8N720 491 aaPredicted RBP13.64□□□□□ -0.23
CNN1-201ENST00000252456 STARD8Q92502 1023 aa13.64□□□□□ -0.23
CNN1-201ENST00000252456 N4BP2L2Q92802 583 aaPredicted RBP13.64□□□□□ -0.23
CNN1-201ENST00000252456 KIAA1143Q96AT1 154 aaPredicted RBP13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms