RNA–Protein interactions for RNA: ENST00000245817.4

TNFSF9-201, Transcript of TNF superfamily member 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFSF9, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9-201ENST00000245817 PAOXQ6QHF9 649 aa18.11■□□□□ 0.49
TNFSF9-201ENST00000245817 SLCO4C1Q6ZQN7 724 aa18.11■□□□□ 0.49
TNFSF9-201ENST00000245817 PHACTR4Q8IZ21 702 aa18.11■□□□□ 0.49
TNFSF9-201ENST00000245817 SLC22A18ASQ8N1D0 253 aa18.11■□□□□ 0.49
TNFSF9-201ENST00000245817 SLC6A18Q96N87 628 aa18.11■□□□□ 0.49
TNFSF9-201ENST00000245817 C1orf50Q9BV19 199 aa18.11■□□□□ 0.49
TNFSF9-201ENST00000245817 SLC25A23Q9BV35 468 aa18.11■□□□□ 0.49
TNFSF9-201ENST00000245817 GSDMCQ9BYG8 508 aa18.11■□□□□ 0.49
TNFSF9-201ENST00000245817 EHD1Q9H4M9 534 aa18.11■□□□□ 0.49
TNFSF9-201ENST00000245817 EFCAB1Q9HAE3 211 aa18.11■□□□□ 0.49
TNFSF9-201ENST00000245817 LRTM1Q9HBL6 345 aa18.11■□□□□ 0.49
TNFSF9-201ENST00000245817 AIG1Q9NVV5 245 aa18.11■□□□□ 0.49
TNFSF9-201ENST00000245817 H0YIV9 168 aa18.1■□□□□ 0.49
TNFSF9-201ENST00000245817 AIM2O14862 343 aa18.1■□□□□ 0.49
TNFSF9-201ENST00000245817 CTSEP14091 401 aa18.1■□□□□ 0.49
TNFSF9-201ENST00000245817 GPX3P22352 226 aa18.1■□□□□ 0.49
TNFSF9-201ENST00000245817 RAB28P51157 221 aa18.1■□□□□ 0.49
TNFSF9-201ENST00000245817 DIO3P55073 304 aa18.1■□□□□ 0.49
TNFSF9-201ENST00000245817 NME5P56597 212 aa18.1■□□□□ 0.49
TNFSF9-201ENST00000245817 ART3Q13508 389 aa18.1■□□□□ 0.49
TNFSF9-201ENST00000245817 CACHD1Q5VU97 1274 aa18.1■□□□□ 0.49
TNFSF9-201ENST00000245817 ATG9BQ674R7 924 aa18.1■□□□□ 0.49
TNFSF9-201ENST00000245817 MED27Q6P2C8 311 aa18.1■□□□□ 0.49
TNFSF9-201ENST00000245817 GK5Q6ZS86 529 aa18.1■□□□□ 0.49
TNFSF9-201ENST00000245817 C17orf64Q86WR6 236 aa18.1■□□□□ 0.49
TNFSF9-201ENST00000245817 PARP9Q8IXQ6 854 aa18.1■□□□□ 0.49
TNFSF9-201ENST00000245817 LMNTD1Q8N9Z9 388 aa18.1■□□□□ 0.49
TNFSF9-201ENST00000245817 CXorf40BQ96DE9 158 aa18.1■□□□□ 0.49
TNFSF9-201ENST00000245817 CADM1Q9BY67 442 aaKnown RBP18.1■□□□□ 0.49
TNFSF9-201ENST00000245817 MRPL1Q9BYD6 325 aaKnown RBP18.1■□□□□ 0.49
TNFSF9-201ENST00000245817 MMADHCQ9H3L0 296 aaPredicted RBP18.1■□□□□ 0.49
TNFSF9-201ENST00000245817 SDR39U1Q9NRG7 319 aaPredicted RBP18.1■□□□□ 0.49
TNFSF9-201ENST00000245817 C1orf109Q9NX04 203 aa18.1■□□□□ 0.49
TNFSF9-201ENST00000245817 NDE1Q9NXR1 346 aa18.1■□□□□ 0.49
TNFSF9-201ENST00000245817 PCOLCE2Q9UKZ9 415 aa18.1■□□□□ 0.49
TNFSF9-201ENST00000245817 SERTM1A2A2V5 107 aa18.09■□□□□ 0.49
TNFSF9-201ENST00000245817 RSL1D1O76021 490 aaKnown RBP18.09■□□□□ 0.49
TNFSF9-201ENST00000245817 KRT16P08779 473 aa18.09■□□□□ 0.49
TNFSF9-201ENST00000245817 PCNAP12004 261 aa18.09■□□□□ 0.49
TNFSF9-201ENST00000245817 VARSP26640 1264 aaKnown RBP18.09■□□□□ 0.49
TNFSF9-201ENST00000245817 PGM1P36871 562 aa18.09■□□□□ 0.49
TNFSF9-201ENST00000245817 NUDT2P50583 147 aa18.09■□□□□ 0.49
TNFSF9-201ENST00000245817 RPL38P63173 70 aaKnown RBP18.09■□□□□ 0.49
TNFSF9-201ENST00000245817 PDCD4Q53EL6 469 aaKnown RBP18.09■□□□□ 0.49
TNFSF9-201ENST00000245817 IL23RQ5VWK5 629 aa18.09■□□□□ 0.49
TNFSF9-201ENST00000245817 NXPE4Q6UWF7 544 aa18.09■□□□□ 0.49
TNFSF9-201ENST00000245817 MFSD2AQ8NA29 543 aa18.09■□□□□ 0.49
TNFSF9-201ENST00000245817 CCL4L1Q8NHW4 92 aa18.09■□□□□ 0.49
TNFSF9-201ENST00000245817 UBE2E3Q969T4 207 aa18.09■□□□□ 0.49
TNFSF9-201ENST00000245817 ACAT2Q9BWD1 397 aa18.09■□□□□ 0.49
TNFSF9-201ENST00000245817 ACPTQ9BZG2 426 aa18.09■□□□□ 0.49
TNFSF9-201ENST00000245817 MIR1-1HGQ9H1L0 117 aa18.09■□□□□ 0.49
TNFSF9-201ENST00000245817 TAC3Q9UHF0 121 aa18.09■□□□□ 0.49
TNFSF9-201ENST00000245817 CCL27Q9Y4X3 112 aa18.09■□□□□ 0.49
TNFSF9-201ENST00000245817 GPR45Q9Y5Y3 372 aa18.09■□□□□ 0.49
TNFSF9-201ENST00000245817 PDGFBP01127 241 aaPredicted RBP18.09■□□□□ 0.49
TNFSF9-201ENST00000245817 CD22P20273 847 aa18.09■□□□□ 0.49
TNFSF9-201ENST00000245817 CD38P28907 300 aa18.09■□□□□ 0.49
TNFSF9-201ENST00000245817 PHEXP78562 749 aa18.09■□□□□ 0.49
TNFSF9-201ENST00000245817 SLC25A3Q00325 362 aa18.09■□□□□ 0.49
TNFSF9-201ENST00000245817 CSTF3Q12996 717 aaKnown RBP18.09■□□□□ 0.49
TNFSF9-201ENST00000245817 DDX39BQ13838 428 aaKnown RBP18.09■□□□□ 0.49
TNFSF9-201ENST00000245817 FZD2Q14332 565 aa18.09■□□□□ 0.49
TNFSF9-201ENST00000245817 RFTN2Q52LD8 501 aaPredicted RBP18.09■□□□□ 0.49
TNFSF9-201ENST00000245817 CATSPEREQ5SY80 951 aa18.09■□□□□ 0.49
TNFSF9-201ENST00000245817 C10orf62Q5T681 223 aaPredicted RBP18.09■□□□□ 0.49
TNFSF9-201ENST00000245817 C16orf89Q6UX73 402 aa18.09■□□□□ 0.49
TNFSF9-201ENST00000245817 PARGQ86W56 976 aa18.09■□□□□ 0.49
TNFSF9-201ENST00000245817 KRT78Q8N1N4 520 aa18.09■□□□□ 0.49
TNFSF9-201ENST00000245817 KYQ8NBH2 561 aa18.09■□□□□ 0.49
TNFSF9-201ENST00000245817 OR52E1Q8NGJ3 308 aa18.09■□□□□ 0.49
TNFSF9-201ENST00000245817 ORAI3Q9BRQ5 295 aa18.09■□□□□ 0.49
TNFSF9-201ENST00000245817 BRINP2Q9C0B6 783 aa18.09■□□□□ 0.49
TNFSF9-201ENST00000245817 SLC40A1Q9NP59 571 aa18.09■□□□□ 0.49
TNFSF9-201ENST00000245817 SCHIP1Q9P0W5 487 aaPredicted RBP18.09■□□□□ 0.49
TNFSF9-201ENST00000245817 PNMA8BQ9ULN7 279 aaPredicted RBP18.09■□□□□ 0.49
TNFSF9-201ENST00000245817 SLC22A3O75751 556 aa18.08■□□□□ 0.48
TNFSF9-201ENST00000245817 F3P13726 295 aa18.08■□□□□ 0.48
TNFSF9-201ENST00000245817 HSD3B1P14060 373 aa18.08■□□□□ 0.48
TNFSF9-201ENST00000245817 HSD3B2P26439 372 aa18.08■□□□□ 0.48
TNFSF9-201ENST00000245817 MAPK1P28482 360 aa18.08■□□□□ 0.48
TNFSF9-201ENST00000245817 MRPL19P49406 292 aaKnown RBP18.08■□□□□ 0.48
TNFSF9-201ENST00000245817 RACK1P63244 317 aaKnown RBP18.08■□□□□ 0.48
TNFSF9-201ENST00000245817 EIF2B5Q13144 721 aaKnown RBP18.08■□□□□ 0.48
TNFSF9-201ENST00000245817 SLBPQ14493 270 aaKnown RBP eCLIP18.08■□□□□ 0.48
TNFSF9-201ENST00000245817 ZFAND4Q86XD8 727 aa18.08■□□□□ 0.48
TNFSF9-201ENST00000245817 TRIM48Q8IWZ4 208 aa18.08■□□□□ 0.48
TNFSF9-201ENST00000245817 OR9I1Q8NGQ6 314 aa18.08■□□□□ 0.48
TNFSF9-201ENST00000245817 OR2L8Q8NGY9 312 aa18.08■□□□□ 0.48
TNFSF9-201ENST00000245817 FBXO27Q8NI29 283 aa18.08■□□□□ 0.48
TNFSF9-201ENST00000245817 WDR20Q8TBZ3 569 aa18.08■□□□□ 0.48
TNFSF9-201ENST00000245817 GPBAR1Q8TDU6 330 aa18.08■□□□□ 0.48
TNFSF9-201ENST00000245817 RCN3Q96D15 328 aa18.08■□□□□ 0.48
TNFSF9-201ENST00000245817 WDR34Q96EX3 536 aa18.08■□□□□ 0.48
TNFSF9-201ENST00000245817 CMTM7Q96FZ5 175 aa18.08■□□□□ 0.48
TNFSF9-201ENST00000245817 XKR8Q9H6D3 395 aa18.08■□□□□ 0.48
TNFSF9-201ENST00000245817 KIR3DX1Q9H7L2 352 aa18.08■□□□□ 0.48
TNFSF9-201ENST00000245817 GPR27Q9NS67 375 aa18.08■□□□□ 0.48
TNFSF9-201ENST00000245817 TMEM45AQ9NWC5 275 aa18.08■□□□□ 0.48
TNFSF9-201ENST00000245817 ZIM2Q9NZV7 527 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms