RNA–Protein interactions for RNA: ENST00000238688.9

SLIRP-201, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SLIRP, Length 394 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-201ENST00000238688 NPPAP01160 153 aa12.8□□□□□ -0.36
SLIRP-201ENST00000238688 WNT1P04628 370 aa12.8□□□□□ -0.36
SLIRP-201ENST00000238688 PCCBP05166 539 aa12.8□□□□□ -0.36
SLIRP-201ENST00000238688 JUNP05412 331 aaKnown RBP12.8□□□□□ -0.36
SLIRP-201ENST00000238688 CAPN1P07384 714 aa12.8□□□□□ -0.36
SLIRP-201ENST00000238688 TBC1D3HP0C7X1 549 aa12.8□□□□□ -0.36
SLIRP-201ENST00000238688 ZNF883P0CG24 379 aa12.8□□□□□ -0.36
SLIRP-201ENST00000238688 GNAZP19086 355 aa12.8□□□□□ -0.36
SLIRP-201ENST00000238688 HNRNPA2B1P22626 353 aaKnown RBP12.8□□□□□ -0.36
SLIRP-201ENST00000238688 CD27P26842 260 aa12.8□□□□□ -0.36
SLIRP-201ENST00000238688 HTR1BP28222 390 aa12.8□□□□□ -0.36
SLIRP-201ENST00000238688 ACADLP28330 430 aa12.8□□□□□ -0.36
SLIRP-201ENST00000238688 EMX2Q04743 252 aa12.8□□□□□ -0.36
SLIRP-201ENST00000238688 INPP5AQ14642 412 aa12.8□□□□□ -0.36
SLIRP-201ENST00000238688 PTCHD3Q3KNS1 767 aa12.8□□□□□ -0.36
SLIRP-201ENST00000238688 PDCD4Q53EL6 469 aaKnown RBP12.8□□□□□ -0.36
SLIRP-201ENST00000238688 TBC1D3GQ6DHY5 549 aa12.8□□□□□ -0.36
SLIRP-201ENST00000238688 TBC1D3CQ6IPX1 549 aa12.8□□□□□ -0.36
SLIRP-201ENST00000238688 CAPN13Q6MZZ7 669 aaPredicted RBP12.8□□□□□ -0.36
SLIRP-201ENST00000238688 LETMD1Q6P1Q0 360 aa12.8□□□□□ -0.36
SLIRP-201ENST00000238688 CYB5D1Q6P9G0 228 aa12.8□□□□□ -0.36
SLIRP-201ENST00000238688 NAXDQ8IW45 347 aa12.8□□□□□ -0.36
SLIRP-201ENST00000238688 CFAP206Q8IYR0 622 aa12.8□□□□□ -0.36
SLIRP-201ENST00000238688 TBC1D3Q8IZP1 549 aaPredicted RBP12.8□□□□□ -0.36
SLIRP-201ENST00000238688 KYQ8NBH2 561 aa12.8□□□□□ -0.36
SLIRP-201ENST00000238688 PCYOX1LQ8NBM8 494 aa12.8□□□□□ -0.36
SLIRP-201ENST00000238688 RBM15BQ8NDT2 890 aaKnown RBP12.8□□□□□ -0.36
SLIRP-201ENST00000238688 OR52B6Q8NGF0 335 aa12.8□□□□□ -0.36
SLIRP-201ENST00000238688 OR9A1PQ8NGU1 263 aa12.8□□□□□ -0.36
SLIRP-201ENST00000238688 BAHD1Q8TBE0 780 aaPredicted RBP12.8□□□□□ -0.36
SLIRP-201ENST00000238688 SNX19Q92543 992 aa12.8□□□□□ -0.36
SLIRP-201ENST00000238688 ROPN1LQ96C74 230 aa12.8□□□□□ -0.36
SLIRP-201ENST00000238688 AKTIPQ9H8T0 292 aa12.8□□□□□ -0.36
SLIRP-201ENST00000238688 ACTR8Q9H981 624 aa12.8□□□□□ -0.36
SLIRP-201ENST00000238688 TNFRSF12AQ9NP84 129 aa12.8□□□□□ -0.36
SLIRP-201ENST00000238688 GULP1Q9UBP9 304 aa12.8□□□□□ -0.36
SLIRP-201ENST00000238688 BCAP29Q9UHQ4 241 aa12.8□□□□□ -0.36
SLIRP-201ENST00000238688 ZNF225Q9UK10 706 aa12.8□□□□□ -0.36
SLIRP-201ENST00000238688 PCOLCE2Q9UKZ9 415 aa12.8□□□□□ -0.36
SLIRP-201ENST00000238688 PPT2Q9UMR5 302 aa12.8□□□□□ -0.36
SLIRP-201ENST00000238688 TSC22D4Q9Y3Q8 395 aa12.8□□□□□ -0.36
SLIRP-201ENST00000238688 SNX11Q9Y5W9 270 aa12.8□□□□□ -0.36
SLIRP-201ENST00000238688 HEBP2Q9Y5Z4 205 aa12.8□□□□□ -0.36
SLIRP-201ENST00000238688 KCNE2Q9Y6J6 123 aa12.8□□□□□ -0.36
SLIRP-201ENST00000238688 A0A1W2PPC4 97 aa12.79□□□□□ -0.36
SLIRP-201ENST00000238688 FAM221BA6H8Z2 402 aa12.79□□□□□ -0.36
SLIRP-201ENST00000238688 CLGNO14967 610 aa12.79□□□□□ -0.36
SLIRP-201ENST00000238688 RSL1D1O76021 490 aaKnown RBP12.79□□□□□ -0.36
SLIRP-201ENST00000238688 PROS1P07225 676 aa12.79□□□□□ -0.36
SLIRP-201ENST00000238688 ERGP11308 486 aa12.79□□□□□ -0.36
SLIRP-201ENST00000238688 JUPP14923 745 aa12.79□□□□□ -0.36
SLIRP-201ENST00000238688 NDUFS1P28331 727 aa12.79□□□□□ -0.36
SLIRP-201ENST00000238688 MAPK1P28482 360 aa12.79□□□□□ -0.36
SLIRP-201ENST00000238688 SERPINB1P30740 379 aa12.79□□□□□ -0.36
SLIRP-201ENST00000238688 AKT2P31751 481 aa12.79□□□□□ -0.36
SLIRP-201ENST00000238688 CPOXP36551 454 aa12.79□□□□□ -0.36
SLIRP-201ENST00000238688 ARL1P40616 181 aaPredicted RBP12.79□□□□□ -0.36
SLIRP-201ENST00000238688 AFF3P51826 1226 aaKnown RBP12.79□□□□□ -0.36
SLIRP-201ENST00000238688 KCNJ2P63252 427 aa12.79□□□□□ -0.36
SLIRP-201ENST00000238688 ELF3P78545 371 aaPredicted RBP12.79□□□□□ -0.36
SLIRP-201ENST00000238688 MXRA7P84157 204 aa12.79□□□□□ -0.36
SLIRP-201ENST00000238688 CSTF3Q12996 717 aaKnown RBP12.79□□□□□ -0.36
SLIRP-201ENST00000238688 LAPTM5Q13571 262 aa12.79□□□□□ -0.36
SLIRP-201ENST00000238688 FASTKQ14296 549 aaKnown RBP12.79□□□□□ -0.36
SLIRP-201ENST00000238688 TRIP6Q15654 476 aaKnown RBP12.79□□□□□ -0.36
SLIRP-201ENST00000238688 TRMT5Q32P41 509 aaKnown RBP12.79□□□□□ -0.36
SLIRP-201ENST00000238688 AGTRAPQ6RW13 159 aa12.79□□□□□ -0.36
SLIRP-201ENST00000238688 WASH2PQ6VEQ5 465 aa12.79□□□□□ -0.36
SLIRP-201ENST00000238688 SLCO6A1Q86UG4 719 aa12.79□□□□□ -0.36
SLIRP-201ENST00000238688 CDYL2Q8N8U2 506 aa12.79□□□□□ -0.36
SLIRP-201ENST00000238688 PLA2G15Q8NCC3 412 aa12.79□□□□□ -0.36
SLIRP-201ENST00000238688 GLB1L3Q8NCI6 653 aaPredicted RBP12.79□□□□□ -0.36
SLIRP-201ENST00000238688 UBE2E3Q969T4 207 aa12.79□□□□□ -0.36
SLIRP-201ENST00000238688 MOCOSQ96EN8 888 aa12.79□□□□□ -0.36
SLIRP-201ENST00000238688 WDR34Q96EX3 536 aa12.79□□□□□ -0.36
SLIRP-201ENST00000238688 PRR11Q96HE9 360 aaPredicted RBP12.79□□□□□ -0.36
SLIRP-201ENST00000238688 HAUS8Q9BT25 410 aa12.79□□□□□ -0.36
SLIRP-201ENST00000238688 APOOQ9BUR5 198 aa12.79□□□□□ -0.36
SLIRP-201ENST00000238688 MRPL1Q9BYD6 325 aaKnown RBP12.79□□□□□ -0.36
SLIRP-201ENST00000238688 TUBB1Q9H4B7 451 aa12.79□□□□□ -0.36
SLIRP-201ENST00000238688 BRF2Q9HAW0 419 aa12.79□□□□□ -0.36
SLIRP-201ENST00000238688 WASH6PQ9NQA3 447 aa12.79□□□□□ -0.36
SLIRP-201ENST00000238688 TM7SF3Q9NS93 570 aa12.79□□□□□ -0.36
SLIRP-201ENST00000238688 AIG1Q9NVV5 245 aa12.79□□□□□ -0.36
SLIRP-201ENST00000238688 NOP53Q9NZM5 478 aaKnown RBP12.79□□□□□ -0.36
SLIRP-201ENST00000238688 STOX2Q9P2F5 926 aaPredicted RBP12.79□□□□□ -0.36
SLIRP-201ENST00000238688 KLK13Q9UKR3 277 aa12.79□□□□□ -0.36
SLIRP-201ENST00000238688 BTBD3Q9Y2F9 522 aa12.79□□□□□ -0.36
SLIRP-201ENST00000238688 NDUFAF1Q9Y375 327 aa12.79□□□□□ -0.36
SLIRP-201ENST00000238688 FIS1Q9Y3D6 152 aa12.79□□□□□ -0.36
SLIRP-201ENST00000238688 CHD6Q8TD26 2715 aa12.79□□□□□ -0.36
SLIRP-201ENST00000238688 ACACAQ13085 2346 aa12.78□□□□□ -0.36
SLIRP-201ENST00000238688 A0A1W2PR77 199 aa12.78□□□□□ -0.36
SLIRP-201ENST00000238688 TMEM202A6NGA9 273 aa12.78□□□□□ -0.36
SLIRP-201ENST00000238688 ANKRD65E5RJM6 399 aa12.78□□□□□ -0.36
SLIRP-201ENST00000238688 H0YIV9 168 aa12.78□□□□□ -0.36
SLIRP-201ENST00000238688 CIB2O75838 187 aa12.78□□□□□ -0.36
SLIRP-201ENST00000238688 CER1O95813 267 aa12.78□□□□□ -0.36
SLIRP-201ENST00000238688 PAK4O96013 591 aaPredicted RBP12.78□□□□□ -0.36
SLIRP-201ENST00000238688 SNRPB2P08579 225 aaKnown RBP12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms