RNA–Protein interactions for RNA: ENST00000233575.6

SNX17-201, Transcript of sorting nexin 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX17, Length 2,044 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-201ENST00000233575 NXPH1P58417 271 aa17.94■□□□□ 0.46
SNX17-201ENST00000233575 E2F2Q14209 437 aa17.94■□□□□ 0.46
SNX17-201ENST00000233575 C6orf136Q5SQH8 315 aa17.94■□□□□ 0.46
SNX17-201ENST00000233575 GRHL2Q6ISB3 625 aa17.94■□□□□ 0.46
SNX17-201ENST00000233575 LCTLQ6UWM7 567 aa17.94■□□□□ 0.46
SNX17-201ENST00000233575 LPCAT2Q7L5N7 544 aa17.94■□□□□ 0.46
SNX17-201ENST00000233575 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.94■□□□□ 0.46
SNX17-201ENST00000233575 FAM20CQ8IXL6 584 aa17.94■□□□□ 0.46
SNX17-201ENST00000233575 NAGSQ8N159 534 aa17.94■□□□□ 0.46
SNX17-201ENST00000233575 SMPDL3AQ92484 453 aa17.94■□□□□ 0.46
SNX17-201ENST00000233575 SH3KBP1Q96B97 665 aa17.94■□□□□ 0.46
SNX17-201ENST00000233575 CXorf40BQ96DE9 158 aa17.94■□□□□ 0.46
SNX17-201ENST00000233575 ACPTQ9BZG2 426 aa17.94■□□□□ 0.46
SNX17-201ENST00000233575 CUEDC1Q9NWM3 386 aaPredicted RBP17.94■□□□□ 0.46
SNX17-201ENST00000233575 CCND1P24385 295 aa17.94■□□□□ 0.46
SNX17-201ENST00000233575 PIK3R1P27986 724 aa17.94■□□□□ 0.46
SNX17-201ENST00000233575 NME5P56597 212 aa17.94■□□□□ 0.46
SNX17-201ENST00000233575 NAA25Q14CX7 972 aa17.94■□□□□ 0.46
SNX17-201ENST00000233575 NR6A1Q15406 480 aa17.94■□□□□ 0.46
SNX17-201ENST00000233575 FRG2Q64ET8 278 aa17.94■□□□□ 0.46
SNX17-201ENST00000233575 TRIM46Q7Z4K8 759 aa17.94■□□□□ 0.46
SNX17-201ENST00000233575 LONP2Q86WA8 852 aa17.94■□□□□ 0.46
SNX17-201ENST00000233575 OR2L8Q8NGY9 312 aa17.94■□□□□ 0.46
SNX17-201ENST00000233575 FBXO27Q8NI29 283 aa17.94■□□□□ 0.46
SNX17-201ENST00000233575 WDR20Q8TBZ3 569 aa17.94■□□□□ 0.46
SNX17-201ENST00000233575 SLC7A6OSQ96CW6 309 aaPredicted RBP17.94■□□□□ 0.46
SNX17-201ENST00000233575 FRG2BQ96QU4 278 aa17.94■□□□□ 0.46
SNX17-201ENST00000233575 CCT7Q99832 543 aa17.94■□□□□ 0.46
SNX17-201ENST00000233575 KIR3DX1Q9H7L2 352 aa17.94■□□□□ 0.46
SNX17-201ENST00000233575 TXLNGQ9NUQ3 528 aa17.94■□□□□ 0.46
SNX17-201ENST00000233575 RIC8BQ9NVN3 520 aa17.94■□□□□ 0.46
SNX17-201ENST00000233575 GEMIN8Q9NWZ8 242 aaKnown RBP17.94■□□□□ 0.46
SNX17-201ENST00000233575 SNX6Q9UNH7 406 aa17.94■□□□□ 0.46
SNX17-201ENST00000233575 LOC100653049A0A140TA62 436 aa17.93■□□□□ 0.46
SNX17-201ENST00000233575 GPR37L1O60883 481 aa17.93■□□□□ 0.46
SNX17-201ENST00000233575 VPS4BO75351 444 aa17.93■□□□□ 0.46
SNX17-201ENST00000233575 KRT34O76011 436 aa17.93■□□□□ 0.46
SNX17-201ENST00000233575 PEBP1P30086 187 aaKnown RBP17.93■□□□□ 0.46
SNX17-201ENST00000233575 CASP2P42575 452 aa17.93■□□□□ 0.46
SNX17-201ENST00000233575 DHPSP49366 369 aaPredicted RBP17.93■□□□□ 0.46
SNX17-201ENST00000233575 SLBPQ14493 270 aaKnown RBP eCLIP17.93■□□□□ 0.46
SNX17-201ENST00000233575 RFTN2Q52LD8 501 aaPredicted RBP17.93■□□□□ 0.46
SNX17-201ENST00000233575 WDR45BQ5MNZ6 344 aa17.93■□□□□ 0.46
SNX17-201ENST00000233575 ATG9BQ674R7 924 aa17.93■□□□□ 0.46
SNX17-201ENST00000233575 NXPE4Q6UWF7 544 aa17.93■□□□□ 0.46
SNX17-201ENST00000233575 KIF2BQ8N4N8 673 aa17.93■□□□□ 0.46
SNX17-201ENST00000233575 CHCHD4Q8N4Q1 142 aa17.93■□□□□ 0.46
SNX17-201ENST00000233575 ZNF740Q8NDX6 193 aa17.93■□□□□ 0.46
SNX17-201ENST00000233575 OR4E2Q8NGC2 313 aa17.93■□□□□ 0.46
SNX17-201ENST00000233575 OR9I1Q8NGQ6 314 aa17.93■□□□□ 0.46
SNX17-201ENST00000233575 SETD7Q8WTS6 366 aaKnown RBP17.93■□□□□ 0.46
SNX17-201ENST00000233575 MTERF1Q99551 399 aaKnown RBP17.93■□□□□ 0.46
SNX17-201ENST00000233575 SLC40A1Q9NP59 571 aa17.93■□□□□ 0.46
SNX17-201ENST00000233575 TMEM74BQ9NUR3 256 aa17.93■□□□□ 0.46
SNX17-201ENST00000233575 SPHK1Q9NYA1 384 aa17.93■□□□□ 0.46
SNX17-201ENST00000233575 VILLO15195 856 aa17.93■□□□□ 0.46
SNX17-201ENST00000233575 SNRNP200O75643 2136 aaKnown RBP17.93■□□□□ 0.46
SNX17-201ENST00000233575 C1GALT1C1LP0DN25 315 aa17.93■□□□□ 0.46
SNX17-201ENST00000233575 ESRRAP11474 423 aaPredicted RBP17.93■□□□□ 0.46
SNX17-201ENST00000233575 HNF4AP41235 474 aa17.93■□□□□ 0.46
SNX17-201ENST00000233575 DDX39BQ13838 428 aaKnown RBP17.93■□□□□ 0.46
SNX17-201ENST00000233575 TBCCQ15814 346 aa17.93■□□□□ 0.46
SNX17-201ENST00000233575 AP5B1Q2VPB7 878 aa17.93■□□□□ 0.46
SNX17-201ENST00000233575 ATP6AP1LQ52LC2 224 aa17.93■□□□□ 0.46
SNX17-201ENST00000233575 OGFOD2Q6N063 350 aa17.93■□□□□ 0.46
SNX17-201ENST00000233575 RNF165Q6ZSG1 346 aa17.93■□□□□ 0.46
SNX17-201ENST00000233575 RAB42Q8N4Z0 105 aa17.93■□□□□ 0.46
SNX17-201ENST00000233575 FNDC5Q8NAU1 212 aa17.93■□□□□ 0.46
SNX17-201ENST00000233575 FAM46DQ8NEK8 389 aa17.93■□□□□ 0.46
SNX17-201ENST00000233575 SLC37A2Q8TED4 501 aa17.93■□□□□ 0.46
SNX17-201ENST00000233575 WDR34Q96EX3 536 aa17.93■□□□□ 0.46
SNX17-201ENST00000233575 TAGLN3Q9UI15 199 aa17.93■□□□□ 0.46
SNX17-201ENST00000233575 TTC28Q96AY4 2481 aa17.92■□□□□ 0.46
SNX17-201ENST00000233575 ZNF839A8K0R7 811 aa17.92■□□□□ 0.46
SNX17-201ENST00000233575 HRO43593 1189 aa17.92■□□□□ 0.46
SNX17-201ENST00000233575 SDC3O75056 442 aa17.92■□□□□ 0.46
SNX17-201ENST00000233575 CALB2P22676 271 aa17.92■□□□□ 0.46
SNX17-201ENST00000233575 AFF3P51826 1226 aaKnown RBP17.92■□□□□ 0.46
SNX17-201ENST00000233575 GPR18Q14330 331 aa17.92■□□□□ 0.46
SNX17-201ENST00000233575 PMS2CLQ68D20 193 aa17.92■□□□□ 0.46
SNX17-201ENST00000233575 PAOXQ6QHF9 649 aa17.92■□□□□ 0.46
SNX17-201ENST00000233575 OR2A1Q8NGT9 310 aa17.92■□□□□ 0.46
SNX17-201ENST00000233575 LMX1AQ8TE12 382 aa17.92■□□□□ 0.46
SNX17-201ENST00000233575 LCN9Q8WX39 176 aa17.92■□□□□ 0.46
SNX17-201ENST00000233575 HAUS8Q9BT25 410 aa17.92■□□□□ 0.46
SNX17-201ENST00000233575 PFDN4Q9NQP4 134 aa17.92■□□□□ 0.46
SNX17-201ENST00000233575 CPNE7Q9UBL6 633 aa17.92■□□□□ 0.46
SNX17-201ENST00000233575 TNRC6BQ9UPQ9 1833 aaKnown RBP17.92■□□□□ 0.46
SNX17-201ENST00000233575 A0A1B0GVT2 93 aa17.91■□□□□ 0.46
SNX17-201ENST00000233575 PIPSLA2A3N6 862 aa17.91■□□□□ 0.46
SNX17-201ENST00000233575 B4DGG1 531 aa17.91■□□□□ 0.46
SNX17-201ENST00000233575 H0YIV9 168 aa17.91■□□□□ 0.46
SNX17-201ENST00000233575 SLC28A1O00337 649 aa17.91■□□□□ 0.46
SNX17-201ENST00000233575 RGS14O43566 566 aa17.91■□□□□ 0.46
SNX17-201ENST00000233575 NRP2O60462 931 aa17.91■□□□□ 0.46
SNX17-201ENST00000233575 NDUFS1P28331 727 aa17.91■□□□□ 0.46
SNX17-201ENST00000233575 SQLEQ14534 574 aa17.91■□□□□ 0.46
SNX17-201ENST00000233575 IMPG1Q17R60 797 aa17.91■□□□□ 0.46
SNX17-201ENST00000233575 LYSMD4Q5XG99 296 aa17.91■□□□□ 0.46
SNX17-201ENST00000233575 RINLQ6ZS11 566 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms