RNA–Protein interactions for RNA: ENST00000233242.5

APOB-201, Transcript of apolipoprotein B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOB, Length 14,121 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-201ENST00000233242 MYO5BQ9ULV0 1848 aa8.03□□□□□ -1.12
APOB-201ENST00000233242 SLIT3O75094 1523 aa8.03□□□□□ -1.12
APOB-201ENST00000233242 CREG1O75629 220 aa8.03□□□□□ -1.12
APOB-201ENST00000233242 POU2F1P14859 743 aa8.03□□□□□ -1.12
APOB-201ENST00000233242 HSPA7P48741 367 aa8.03□□□□□ -1.12
APOB-201ENST00000233242 CAPZA1P52907 286 aa8.03□□□□□ -1.12
APOB-201ENST00000233242 MOB2Q70IA6 237 aa8.03□□□□□ -1.12
APOB-201ENST00000233242 RPLP0P6Q8NHW5 317 aa8.03□□□□□ -1.12
APOB-201ENST00000233242 TRAPPC12Q8WVT3 735 aa8.03□□□□□ -1.12
APOB-201ENST00000233242 TP73O15350 636 aa8.03□□□□□ -1.12
APOB-201ENST00000233242 VEGFAP15692 232 aaPredicted RBP8.03□□□□□ -1.12
APOB-201ENST00000233242 UGT2B10P36537 528 aa8.03□□□□□ -1.12
APOB-201ENST00000233242 OR2L2Q8NH16 312 aa8.03□□□□□ -1.12
APOB-201ENST00000233242 SETD6Q8TBK2 473 aa8.03□□□□□ -1.12
APOB-201ENST00000233242 FGFBP2Q9BYJ0 223 aa8.03□□□□□ -1.12
APOB-201ENST00000233242 ANKRD60Q9BZ19 345 aa8.03□□□□□ -1.12
APOB-201ENST00000233242 MAGIXQ9H6Y5 334 aa8.03□□□□□ -1.12
APOB-201ENST00000233242 LYARQ9NX58 379 aaKnown RBP8.03□□□□□ -1.12
APOB-201ENST00000233242 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.03□□□□□ -1.12
APOB-201ENST00000233242 FZD10Q9ULW2 581 aa8.03□□□□□ -1.12
APOB-201ENST00000233242 A8MT66 165 aa8.03□□□□□ -1.12
APOB-201ENST00000233242 C9JVG2 144 aa8.03□□□□□ -1.12
APOB-201ENST00000233242 ALPPP05187 535 aa8.03□□□□□ -1.12
APOB-201ENST00000233242 E2F1Q01094 437 aa8.03□□□□□ -1.12
APOB-201ENST00000233242 ST3GAL4Q11206 333 aa8.03□□□□□ -1.12
APOB-201ENST00000233242 ATG9BQ674R7 924 aa8.03□□□□□ -1.12
APOB-201ENST00000233242 LRRN1Q6UXK5 716 aa8.03□□□□□ -1.12
APOB-201ENST00000233242 PTTG3PQ9NZH4 202 aa8.03□□□□□ -1.12
APOB-201ENST00000233242 TBL1XO60907 577 aa8.03□□□□□ -1.12
APOB-201ENST00000233242 TFPTP0C1Z6 253 aa8.03□□□□□ -1.12
APOB-201ENST00000233242 CDKL4Q5MAI5 379 aa8.03□□□□□ -1.12
APOB-201ENST00000233242 AMIGO1Q86WK6 493 aa8.03□□□□□ -1.12
APOB-201ENST00000233242 IL4I1Q96RQ9 567 aa8.03□□□□□ -1.12
APOB-201ENST00000233242 GPX6P59796 221 aa8.03□□□□□ -1.12
APOB-201ENST00000233242 IL10RBQ08334 325 aa8.03□□□□□ -1.12
APOB-201ENST00000233242 GPR33Q49SQ1 333 aa8.03□□□□□ -1.12
APOB-201ENST00000233242 CCSAPQ6IQ19 270 aaPredicted RBP8.03□□□□□ -1.12
APOB-201ENST00000233242 MGAT4BQ9UQ53 548 aa8.03□□□□□ -1.12
APOB-201ENST00000233242 TLR6Q9Y2C9 796 aa8.03□□□□□ -1.12
APOB-201ENST00000233242 A0A1W2PRQ8 180 aa8.03□□□□□ -1.12
APOB-201ENST00000233242 CNTN5O94779 1100 aa8.03□□□□□ -1.12
APOB-201ENST00000233242 TGM6O95932 706 aa8.03□□□□□ -1.12
APOB-201ENST00000233242 ELFN1P0C7U0 828 aa8.03□□□□□ -1.12
APOB-201ENST00000233242 WDR45BQ5MNZ6 344 aa8.03□□□□□ -1.12
APOB-201ENST00000233242 FAM198BQ6UWH4 519 aa8.03□□□□□ -1.12
APOB-201ENST00000233242 DDX51Q8N8A6 666 aaKnown RBP eCLIP8.03□□□□□ -1.12
APOB-201ENST00000233242 ZNF599Q96NL3 588 aa8.03□□□□□ -1.12
APOB-201ENST00000233242 PHB2Q99623 299 aa8.03□□□□□ -1.12
APOB-201ENST00000233242 STUB1Q9UNE7 303 aa8.03□□□□□ -1.12
APOB-201ENST00000233242 BORCS7-ASMTA0A0B4J1R7 106 aa8.03□□□□□ -1.12
APOB-201ENST00000233242 SCN2BO60939 215 aa8.03□□□□□ -1.12
APOB-201ENST00000233242 SPARCP09486 303 aa8.03□□□□□ -1.12
APOB-201ENST00000233242 HOXD8P13378 290 aaPredicted RBP8.03□□□□□ -1.12
APOB-201ENST00000233242 HTR1BP28222 390 aa8.03□□□□□ -1.12
APOB-201ENST00000233242 EML3Q32P44 896 aa8.03□□□□□ -1.12
APOB-201ENST00000233242 HAPLN3Q96S86 360 aa8.03□□□□□ -1.12
APOB-201ENST00000233242 TM6SF2Q9BZW4 377 aa8.03□□□□□ -1.12
APOB-201ENST00000233242 RHBGQ9H310 441 aa8.03□□□□□ -1.12
APOB-201ENST00000233242 KELP23276 732 aa8.03□□□□□ -1.12
APOB-201ENST00000233242 CDH11P55287 796 aa8.03□□□□□ -1.12
APOB-201ENST00000233242 SMARCD3Q6STE5 483 aa8.03□□□□□ -1.12
APOB-201ENST00000233242 SLC36A4Q6YBV0 504 aa8.03□□□□□ -1.12
APOB-201ENST00000233242 ERLEC1Q96DZ1 483 aa8.03□□□□□ -1.12
APOB-201ENST00000233242 ABCG8Q9H221 673 aa8.03□□□□□ -1.12
APOB-201ENST00000233242 NEUROD4Q9HD90 331 aa8.03□□□□□ -1.12
APOB-201ENST00000233242 ZDHHC7Q9NXF8 308 aa8.03□□□□□ -1.12
APOB-201ENST00000233242 GTF2IRD1Q9UHL9 959 aa8.03□□□□□ -1.12
APOB-201ENST00000233242 FBXW11Q9UKB1 542 aa8.03□□□□□ -1.12
APOB-201ENST00000233242 FARSAQ9Y285 508 aaKnown RBP8.03□□□□□ -1.12
APOB-201ENST00000233242 MICAL3Q7RTP6 2002 aa8.02□□□□□ -1.12
APOB-201ENST00000233242 CD48P09326 243 aa8.02□□□□□ -1.12
APOB-201ENST00000233242 IGFALSP35858 605 aa8.02□□□□□ -1.12
APOB-201ENST00000233242 ZNF563Q8TA94 476 aa8.02□□□□□ -1.12
APOB-201ENST00000233242 ITM2CQ9NQX7 267 aa8.02□□□□□ -1.12
APOB-201ENST00000233242 ASB3Q9Y575 518 aa8.02□□□□□ -1.12
APOB-201ENST00000233242 INSIG1O15503 277 aa8.02□□□□□ -1.12
APOB-201ENST00000233242 APOC3P02656 99 aa8.02□□□□□ -1.12
APOB-201ENST00000233242 MYCLP1P12525 358 aaPredicted RBP8.02□□□□□ -1.12
APOB-201ENST00000233242 PRKACBP22694 351 aa8.02□□□□□ -1.12
APOB-201ENST00000233242 HTR1EP28566 365 aa8.02□□□□□ -1.12
APOB-201ENST00000233242 WEE1P30291 646 aa8.02□□□□□ -1.12
APOB-201ENST00000233242 GNALP38405 381 aa8.02□□□□□ -1.12
APOB-201ENST00000233242 DCDC5Q6ZRR9 648 aa8.02□□□□□ -1.12
APOB-201ENST00000233242 SLC35A5Q9BS91 424 aa8.02□□□□□ -1.12
APOB-201ENST00000233242 P2RX2Q9UBL9 471 aa8.02□□□□□ -1.12
APOB-201ENST00000233242 VPS29Q9UBQ0 182 aa8.02□□□□□ -1.12
APOB-201ENST00000233242 CTPS1P17812 591 aa8.02□□□□□ -1.13
APOB-201ENST00000233242 STT3AP46977 705 aa8.02□□□□□ -1.13
APOB-201ENST00000233242 STXBP1P61764 594 aaKnown RBP8.02□□□□□ -1.13
APOB-201ENST00000233242 GRSF1Q12849 480 aaKnown RBP eCLIP8.02□□□□□ -1.132e-25■■■■□ 22.6
APOB-201ENST00000233242 CPNE2Q96FN4 548 aaPredicted RBP8.02□□□□□ -1.13
APOB-201ENST00000233242 ASB4Q9Y574 426 aa8.02□□□□□ -1.13
APOB-201ENST00000233242 SH3D21A4FU49 640 aa8.02□□□□□ -1.13
APOB-201ENST00000233242 SLC35G5Q96KT7 338 aa8.02□□□□□ -1.13
APOB-201ENST00000233242 EXO5Q9H790 373 aa8.02□□□□□ -1.13
APOB-201ENST00000233242 PLEKHA6Q9Y2H5 1048 aa8.02□□□□□ -1.13
APOB-201ENST00000233242 ENGP17813 658 aa8.02□□□□□ -1.13
APOB-201ENST00000233242 RPP38P78345 283 aaKnown RBP8.02□□□□□ -1.13
APOB-201ENST00000233242 MRPS6P82932 125 aaKnown RBP8.02□□□□□ -1.13
APOB-201ENST00000233242 IRF9Q00978 393 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms