RNA–Protein interactions for RNA: ENST00000231130.3

PCDHB3-201, Transcript of protocadherin beta 3, humanhuman

APPRIS P1 BASIC

Gene PCDHB3, Length 3,355 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3-201ENST00000231130 NUPL2O15504 423 aaKnown RBP13.79□□□□□ -0.2
PCDHB3-201ENST00000231130 NBNO60934 754 aa13.79□□□□□ -0.2
PCDHB3-201ENST00000231130 CD6P30203 668 aa13.79□□□□□ -0.2
PCDHB3-201ENST00000231130 DBPQ10586 325 aaPredicted RBP13.79□□□□□ -0.2
PCDHB3-201ENST00000231130 SNTA1Q13424 505 aa13.79□□□□□ -0.2
PCDHB3-201ENST00000231130 CCDC85BQ15834 202 aaPredicted RBP13.79□□□□□ -0.2
PCDHB3-201ENST00000231130 CPSF6Q16630 551 aaKnown RBP eCLIP13.79□□□□□ -0.2
PCDHB3-201ENST00000231130 FAM122CQ6P4D5 195 aa13.79□□□□□ -0.2
PCDHB3-201ENST00000231130 METTL23Q86XA0 190 aa13.79□□□□□ -0.2
PCDHB3-201ENST00000231130 ZNF548Q8NEK5 533 aaPredicted RBP13.79□□□□□ -0.2
PCDHB3-201ENST00000231130 ARRDC2Q8TBH0 407 aa13.79□□□□□ -0.2
PCDHB3-201ENST00000231130 CDCA5Q96FF9 252 aa13.79□□□□□ -0.2
PCDHB3-201ENST00000231130 TSEN34Q9BSV6 310 aaKnown RBP13.79□□□□□ -0.2
PCDHB3-201ENST00000231130 ARNT2Q9HBZ2 717 aa13.79□□□□□ -0.2
PCDHB3-201ENST00000231130 SLC25A37Q9NYZ2 338 aa13.79□□□□□ -0.2
PCDHB3-201ENST00000231130 TMEFF2Q9UIK5 374 aaPredicted RBP13.79□□□□□ -0.2
PCDHB3-201ENST00000231130 TMPRSS11EQ9UL52 423 aa13.79□□□□□ -0.2
PCDHB3-201ENST00000231130 A0A0D9SEW6 157 aa13.79□□□□□ -0.2
PCDHB3-201ENST00000231130 METTL15A6NJ78 407 aa13.79□□□□□ -0.2
PCDHB3-201ENST00000231130 PEX11BO96011 259 aa13.79□□□□□ -0.2
PCDHB3-201ENST00000231130 ITGB1P05556 798 aa13.79□□□□□ -0.2
PCDHB3-201ENST00000231130 IDH2P48735 452 aaKnown RBP13.79□□□□□ -0.2
PCDHB3-201ENST00000231130 CASP9P55211 416 aa13.79□□□□□ -0.2
PCDHB3-201ENST00000231130 TBX4P57082 545 aa13.79□□□□□ -0.2
PCDHB3-201ENST00000231130 MVKQ03426 396 aa13.79□□□□□ -0.2
PCDHB3-201ENST00000231130 C5orf22Q49AR2 442 aa13.79□□□□□ -0.2
PCDHB3-201ENST00000231130 SETMARQ53H47 684 aaPredicted RBP13.79□□□□□ -0.2
PCDHB3-201ENST00000231130 XKR7Q5GH72 579 aa13.79□□□□□ -0.2
PCDHB3-201ENST00000231130 DEFB132Q7Z7B7 95 aa13.79□□□□□ -0.2
PCDHB3-201ENST00000231130 SCD5Q86SK9 330 aa13.79□□□□□ -0.2
PCDHB3-201ENST00000231130 ISG20Q96AZ6 181 aaKnown RBP13.79□□□□□ -0.2
PCDHB3-201ENST00000231130 APOL4Q9BPW4 351 aa13.79□□□□□ -0.2
PCDHB3-201ENST00000231130 HDHD5Q9BXW7 423 aa13.79□□□□□ -0.2
PCDHB3-201ENST00000231130 ZYG11BQ9C0D3 744 aa13.79□□□□□ -0.2
PCDHB3-201ENST00000231130 POLR1EQ9GZS1 481 aaKnown RBP13.79□□□□□ -0.2
PCDHB3-201ENST00000231130 C12orf10Q9HB07 376 aa13.79□□□□□ -0.2
PCDHB3-201ENST00000231130 RNF6Q9Y252 685 aa13.79□□□□□ -0.2
PCDHB3-201ENST00000231130 MED16Q9Y2X0 877 aa13.79□□□□□ -0.2
PCDHB3-201ENST00000231130 PTCH2Q9Y6C5 1203 aa13.79□□□□□ -0.2
PCDHB3-201ENST00000231130 LCHNA4D1U4 455 aa13.79□□□□□ -0.2
PCDHB3-201ENST00000231130 E2F3O00716 465 aa13.79□□□□□ -0.2
PCDHB3-201ENST00000231130 WISP3O95389 354 aaPredicted RBP13.79□□□□□ -0.2
PCDHB3-201ENST00000231130 SERPINF2P08697 491 aa13.79□□□□□ -0.2
PCDHB3-201ENST00000231130 CYP2A6P11509 494 aaPredicted RBP13.79□□□□□ -0.2
PCDHB3-201ENST00000231130 GRK4P32298 578 aa13.79□□□□□ -0.2
PCDHB3-201ENST00000231130 DDOSTP39656 456 aa13.79□□□□□ -0.2
PCDHB3-201ENST00000231130 GPAT3Q53EU6 434 aa13.79□□□□□ -0.2
PCDHB3-201ENST00000231130 GALNT11Q8NCW6 608 aa13.79□□□□□ -0.2
PCDHB3-201ENST00000231130 ULK4Q96C45 1275 aa13.79□□□□□ -0.2
PCDHB3-201ENST00000231130 GFM1Q96RP9 751 aaKnown RBP13.79□□□□□ -0.2
PCDHB3-201ENST00000231130 DERL2Q9GZP9 239 aa13.79□□□□□ -0.2
PCDHB3-201ENST00000231130 SAMHD1Q9Y3Z3 626 aaKnown RBP13.79□□□□□ -0.2
PCDHB3-201ENST00000231130 A0A0G2JLL6 359 aaPredicted RBP13.78□□□□□ -0.2
PCDHB3-201ENST00000231130 RRN3P2A6NIE6 340 aa13.78□□□□□ -0.2
PCDHB3-201ENST00000231130 HNRNPCL2B2RXH8 293 aa13.78□□□□□ -0.2
PCDHB3-201ENST00000231130 ZNF780AO75290 641 aaPredicted RBP13.78□□□□□ -0.2
PCDHB3-201ENST00000231130 PDGFAP04085 211 aa13.78□□□□□ -0.2
PCDHB3-201ENST00000231130 DDCP20711 480 aa13.78□□□□□ -0.2
PCDHB3-201ENST00000231130 MC4RP32245 332 aa13.78□□□□□ -0.2
PCDHB3-201ENST00000231130 SOX6P35712 828 aa13.78□□□□□ -0.2
PCDHB3-201ENST00000231130 LIPAP38571 399 aa13.78□□□□□ -0.2
PCDHB3-201ENST00000231130 ZNF33AQ06730 810 aa13.78□□□□□ -0.2
PCDHB3-201ENST00000231130 CBX2Q14781 532 aaPredicted RBP13.78□□□□□ -0.2
PCDHB3-201ENST00000231130 PRSS36Q5K4E3 855 aa13.78□□□□□ -0.2
PCDHB3-201ENST00000231130 SMYD5Q6GMV2 418 aa13.78□□□□□ -0.2
PCDHB3-201ENST00000231130 FBXL22Q6P050 247 aa13.78□□□□□ -0.2
PCDHB3-201ENST00000231130 LINC00299Q6ZSB3 139 aa13.78□□□□□ -0.2
PCDHB3-201ENST00000231130 PRRT2Q7Z6L0 340 aaPredicted RBP13.78□□□□□ -0.2
PCDHB3-201ENST00000231130 RASAL3Q86YV0 1011 aa13.78□□□□□ -0.2
PCDHB3-201ENST00000231130 OR7D4Q8NG98 312 aa13.78□□□□□ -0.2
PCDHB3-201ENST00000231130 RHBDF1Q96CC6 855 aa13.78□□□□□ -0.2
PCDHB3-201ENST00000231130 YIPF6Q96EC8 236 aa13.78□□□□□ -0.2
PCDHB3-201ENST00000231130 SIPA1Q96FS4 1042 aa13.78□□□□□ -0.2
PCDHB3-201ENST00000231130 INPP5KQ9BT40 448 aa13.78□□□□□ -0.2
PCDHB3-201ENST00000231130 ATP6V1HQ9UI12 483 aa13.78□□□□□ -0.2
PCDHB3-201ENST00000231130 OSGIN1Q9UJX0 560 aa13.78□□□□□ -0.2
PCDHB3-201ENST00000231130 DNAJB5O75953 348 aa13.78□□□□□ -0.2
PCDHB3-201ENST00000231130 PKMP14618 531 aaKnown RBP13.78□□□□□ -0.2
PCDHB3-201ENST00000231130 CTSKP43235 329 aa13.78□□□□□ -0.2
PCDHB3-201ENST00000231130 SLC39A12Q504Y0 691 aa13.78□□□□□ -0.2
PCDHB3-201ENST00000231130 OVOS1Q6IE37 1185 aa13.78□□□□□ -0.2
PCDHB3-201ENST00000231130 TSPEARQ8WU66 669 aa13.78□□□□□ -0.2
PCDHB3-201ENST00000231130 REXO5Q96IC2 774 aaKnown RBP13.78□□□□□ -0.2
PCDHB3-201ENST00000231130 RTP3Q9BQQ7 232 aa13.78□□□□□ -0.2
PCDHB3-201ENST00000231130 OR51E2Q9H255 320 aa13.78□□□□□ -0.2
PCDHB3-201ENST00000231130 ACOT13Q9NPJ3 140 aa13.78□□□□□ -0.2
PCDHB3-201ENST00000231130 EVA1BQ9NVM1 165 aa13.78□□□□□ -0.2
PCDHB3-201ENST00000231130 KCNH4Q9UQ05 1017 aa13.78□□□□□ -0.2
PCDHB3-201ENST00000231130 PEX16Q9Y5Y5 336 aa13.78□□□□□ -0.2
PCDHB3-201ENST00000231130 COL1A2P08123 1366 aa13.78□□□□□ -0.2
PCDHB3-201ENST00000231130 CIB4A0PJX0 185 aa13.77□□□□□ -0.2
PCDHB3-201ENST00000231130 DDNO94850 711 aaPredicted RBP13.77□□□□□ -0.2
PCDHB3-201ENST00000231130 FHP07954 510 aa13.77□□□□□ -0.2
PCDHB3-201ENST00000231130 PRR35P0CG20 571 aa13.77□□□□□ -0.2
PCDHB3-201ENST00000231130 ZNF250P15622 560 aa13.77□□□□□ -0.2
PCDHB3-201ENST00000231130 DAPP51397 102 aa13.77□□□□□ -0.2
PCDHB3-201ENST00000231130 RAB25P57735 213 aa13.77□□□□□ -0.2
PCDHB3-201ENST00000231130 GTF2H2Q13888 395 aa13.77□□□□□ -0.2
PCDHB3-201ENST00000231130 GTF2H2CQ6P1K8 395 aa13.77□□□□□ -0.2
PCDHB3-201ENST00000231130 GOLGA7Q7Z5G4 137 aa13.77□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms