RNA–Protein interactions for RNA: ENST00000225655.5

PFN1-201, Transcript of profilin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFN1, Length 1,291 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFN1-201ENST00000225655 EFTUD2Q15029 972 aaKnown RBP eCLIP17.35■□□□□ 0.371e-10■■■■□ 21.7
PFN1-201ENST00000225655 LCN10Q6JVE6 187 aa17.35■□□□□ 0.37
PFN1-201ENST00000225655 ZNF549Q6P9A3 640 aa17.35■□□□□ 0.37
PFN1-201ENST00000225655 CDHR3Q6ZTQ4 885 aa17.35■□□□□ 0.37
PFN1-201ENST00000225655 UHMK1Q8TAS1 419 aaKnown RBP17.35■□□□□ 0.37
PFN1-201ENST00000225655 LKAAEAR1Q8TD35 194 aa17.35■□□□□ 0.37
PFN1-201ENST00000225655 FAM136AQ96C01 138 aa17.35■□□□□ 0.37
PFN1-201ENST00000225655 MRRFQ96E11 262 aaKnown RBP17.35■□□□□ 0.37
PFN1-201ENST00000225655 TCTN2Q96GX1 697 aa17.35■□□□□ 0.37
PFN1-201ENST00000225655 GPR21Q99679 349 aa17.35■□□□□ 0.37
PFN1-201ENST00000225655 DPH2Q9BQC3 489 aaPredicted RBP17.35■□□□□ 0.37
PFN1-201ENST00000225655 TRIM55Q9BYV6 548 aa17.35■□□□□ 0.37
PFN1-201ENST00000225655 CHRNA10Q9GZZ6 450 aa17.35■□□□□ 0.37
PFN1-201ENST00000225655 KLHL25Q9H0H3 589 aa17.35■□□□□ 0.37
PFN1-201ENST00000225655 PCMTD2Q9NV79 361 aa17.35■□□□□ 0.37
PFN1-201ENST00000225655 SNX7Q9UNH6 387 aa17.35■□□□□ 0.37
PFN1-201ENST00000225655 NBASA2RRP1 2371 aa17.35■□□□□ 0.37
PFN1-201ENST00000225655 HECTD1Q9ULT8 2610 aa17.34■□□□□ 0.37
PFN1-201ENST00000225655 E7EQ34 232 aa17.34■□□□□ 0.37
PFN1-201ENST00000225655 POC1B-GALNT4F8VUJ3 575 aa17.34■□□□□ 0.37
PFN1-201ENST00000225655 EIF3FO00303 357 aaPredicted RBP17.34■□□□□ 0.37
PFN1-201ENST00000225655 SEC16AO15027 2179 aa17.34■□□□□ 0.37
PFN1-201ENST00000225655 PIAS1O75925 651 aa17.34■□□□□ 0.37
PFN1-201ENST00000225655 SLCO2B1O94956 709 aa17.34■□□□□ 0.37
PFN1-201ENST00000225655 CHRM5P08912 532 aaPredicted RBP17.34■□□□□ 0.37
PFN1-201ENST00000225655 HBQ1P09105 142 aa17.34■□□□□ 0.37
PFN1-201ENST00000225655 TPBGLP0DKB5 382 aa17.34■□□□□ 0.37
PFN1-201ENST00000225655 UGT2B7P16662 529 aa17.34■□□□□ 0.37
PFN1-201ENST00000225655 CNTFP26441 200 aa17.34■□□□□ 0.37
PFN1-201ENST00000225655 CLCN7P51798 805 aa17.34■□□□□ 0.37
PFN1-201ENST00000225655 USP10Q14694 798 aaKnown RBP17.34■□□□□ 0.37
PFN1-201ENST00000225655 RBM20Q5T481 1227 aaKnown RBP17.34■□□□□ 0.37
PFN1-201ENST00000225655 TTC23LQ6PF05 361 aa17.34■□□□□ 0.37
PFN1-201ENST00000225655 NAPRTQ6XQN6 538 aa17.34■□□□□ 0.37
PFN1-201ENST00000225655 SYTL1Q8IYJ3 562 aa17.34■□□□□ 0.37
PFN1-201ENST00000225655 SLC22A15Q8IZD6 547 aa17.34■□□□□ 0.37
PFN1-201ENST00000225655 ENDOVQ8N8Q3 282 aaKnown RBP17.34■□□□□ 0.37
PFN1-201ENST00000225655 C19orf47Q8N9M1 422 aaKnown RBP17.34■□□□□ 0.37
PFN1-201ENST00000225655 TEX19Q8NA77 164 aa17.34■□□□□ 0.37
PFN1-201ENST00000225655 FLVCR1-AS1Q8TAF5 88 aa17.34■□□□□ 0.37
PFN1-201ENST00000225655 ADAMTS17Q8TE56 1095 aa17.34■□□□□ 0.37
PFN1-201ENST00000225655 OR2A14Q96R47 310 aa17.34■□□□□ 0.37
PFN1-201ENST00000225655 PAFAH2Q99487 392 aa17.34■□□□□ 0.37
PFN1-201ENST00000225655 POPDC3Q9HBV1 291 aa17.34■□□□□ 0.37
PFN1-201ENST00000225655 FETUBQ9UGM5 382 aa17.34■□□□□ 0.37
PFN1-201ENST00000225655 TCFL5Q9UL49 500 aa17.34■□□□□ 0.37
PFN1-201ENST00000225655 SLC39A10Q9ULF5 831 aa17.34■□□□□ 0.37
PFN1-201ENST00000225655 DHRS7Q9Y394 339 aa17.34■□□□□ 0.37
PFN1-201ENST00000225655 PCDHGA9Q9Y5G4 932 aaKnown RBP17.34■□□□□ 0.37
PFN1-201ENST00000225655 FLNCQ14315 2725 aa17.33■□□□□ 0.36
PFN1-201ENST00000225655 ZNF749O43361 778 aa17.33■□□□□ 0.36
PFN1-201ENST00000225655 GPC4O75487 556 aa17.33■□□□□ 0.36
PFN1-201ENST00000225655 CAPN1P07384 714 aa17.33■□□□□ 0.36
PFN1-201ENST00000225655 STMN1P16949 149 aa17.33■□□□□ 0.36
PFN1-201ENST00000225655 FDXRP22570 491 aa17.33■□□□□ 0.36
PFN1-201ENST00000225655 IFFO1Q0D2I5 559 aa17.33■□□□□ 0.36
PFN1-201ENST00000225655 IGFBP7Q16270 282 aa17.33■□□□□ 0.36
PFN1-201ENST00000225655 CPZQ66K79 652 aa17.33■□□□□ 0.36
PFN1-201ENST00000225655 FAM198BQ6UWH4 519 aa17.33■□□□□ 0.36
PFN1-201ENST00000225655 NEK10Q6ZWH5 1172 aa17.33■□□□□ 0.36
PFN1-201ENST00000225655 TRIM73Q86UV7 250 aa17.33■□□□□ 0.36
PFN1-201ENST00000225655 GPR135Q8IZ08 494 aa17.33■□□□□ 0.36
PFN1-201ENST00000225655 SLC44A1Q8WWI5 657 aa17.33■□□□□ 0.36
PFN1-201ENST00000225655 GPR22Q99680 433 aa17.33■□□□□ 0.36
PFN1-201ENST00000225655 SLC7A5P2Q9GIP4 190 aa17.33■□□□□ 0.36
PFN1-201ENST00000225655 ING2Q9H160 280 aa17.33■□□□□ 0.36
PFN1-201ENST00000225655 FAM60AQ9NP50 221 aa17.33■□□□□ 0.36
PFN1-201ENST00000225655 ACSS2Q9NR19 701 aa17.33■□□□□ 0.36
PFN1-201ENST00000225655 ARGLU1Q9NWB6 273 aaPredicted RBP17.33■□□□□ 0.36
PFN1-201ENST00000225655 SPHK1Q9NYA1 384 aa17.33■□□□□ 0.36
PFN1-201ENST00000225655 ZNF180Q9UJW8 692 aa17.33■□□□□ 0.36
PFN1-201ENST00000225655 TDRKHQ9Y2W6 561 aaKnown RBP17.33■□□□□ 0.36
PFN1-201ENST00000225655 PTPN13Q12923 2485 aa17.32■□□□□ 0.36
PFN1-201ENST00000225655 MED13Q9UHV7 2174 aa17.32■□□□□ 0.36
PFN1-201ENST00000225655 SNRNP200O75643 2136 aaKnown RBP17.32■□□□□ 0.36
PFN1-201ENST00000225655 CCDC151A5D8V7 595 aa17.32■□□□□ 0.36
PFN1-201ENST00000225655 PABPN1LA6NDY0 278 aaKnown RBP17.32■□□□□ 0.36
PFN1-201ENST00000225655 H3BMH7 237 aa17.32■□□□□ 0.36
PFN1-201ENST00000225655 C1QAP02745 245 aa17.32■□□□□ 0.36
PFN1-201ENST00000225655 PDGFAP04085 211 aa17.32■□□□□ 0.36
PFN1-201ENST00000225655 HSD17B3P37058 310 aa17.32■□□□□ 0.36
PFN1-201ENST00000225655 GABRA4P48169 554 aa17.32■□□□□ 0.36
PFN1-201ENST00000225655 CDKN2DP55273 166 aa17.32■□□□□ 0.36
PFN1-201ENST00000225655 IL2P60568 153 aa17.32■□□□□ 0.36
PFN1-201ENST00000225655 NAA30Q147X3 362 aaPredicted RBP17.32■□□□□ 0.36
PFN1-201ENST00000225655 NCF4Q15080 339 aa17.32■□□□□ 0.36
PFN1-201ENST00000225655 ZIC1Q15915 447 aa17.32■□□□□ 0.36
PFN1-201ENST00000225655 PTCHD3Q3KNS1 767 aa17.32■□□□□ 0.36
PFN1-201ENST00000225655 ZNF385CQ66K41 422 aaPredicted RBP17.32■□□□□ 0.36
PFN1-201ENST00000225655 UNC5DQ6UXZ4 953 aa17.32■□□□□ 0.36
PFN1-201ENST00000225655 CCDC91Q7Z6B0 441 aa17.32■□□□□ 0.36
PFN1-201ENST00000225655 MYO1HQ8N1T3 1032 aa17.32■□□□□ 0.36
PFN1-201ENST00000225655 CD200R1Q8TD46 325 aa17.32■□□□□ 0.36
PFN1-201ENST00000225655 MAGEC3Q8TD91 643 aa17.32■□□□□ 0.36
PFN1-201ENST00000225655 N4BP2L2Q92802 583 aaPredicted RBP17.32■□□□□ 0.36
PFN1-201ENST00000225655 MLXIPLQ9NP71 852 aa17.32■□□□□ 0.36
PFN1-201ENST00000225655 AP1M2Q9Y6Q5 423 aa17.32■□□□□ 0.36
PFN1-201ENST00000225655 TNRC6AQ8NDV7 1962 aaKnown RBP17.31■□□□□ 0.36
PFN1-201ENST00000225655 A0A0J9YY10 115 aa17.31■□□□□ 0.36
PFN1-201ENST00000225655 ARGFXA6NJG6 315 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms