RNA–Protein interactions for RNA: ENST00000204961.4

EFNB1-201, Transcript of ephrin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFNB1, Length 3,314 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB1-201ENST00000204961 TNPO3Q9Y5L0 923 aaKnown RBP14.67□□□□□ -0.06
EFNB1-201ENST00000204961 NEDD8-MDP1E9PL57 170 aa14.66□□□□□ -0.06
EFNB1-201ENST00000204961 FAM227AF5H4B4 570 aa14.66□□□□□ -0.06
EFNB1-201ENST00000204961 CLIC1O00299 241 aa14.66□□□□□ -0.06
EFNB1-201ENST00000204961 INPPL1O15357 1258 aa14.66□□□□□ -0.06
EFNB1-201ENST00000204961 ABCB7O75027 752 aa14.66□□□□□ -0.06
EFNB1-201ENST00000204961 CYP7B1O75881 506 aa14.66□□□□□ -0.06
EFNB1-201ENST00000204961 CAPNS1P04632 268 aa14.66□□□□□ -0.06
EFNB1-201ENST00000204961 LAMP1P11279 417 aa14.66□□□□□ -0.06
EFNB1-201ENST00000204961 SOAT1P35610 550 aa14.66□□□□□ -0.06
EFNB1-201ENST00000204961 BDKRB1P46663 353 aa14.66□□□□□ -0.06
EFNB1-201ENST00000204961 RPS3AP61247 264 aaKnown RBP14.66□□□□□ -0.06
EFNB1-201ENST00000204961 FKBP1BP68106 108 aa14.66□□□□□ -0.06
EFNB1-201ENST00000204961 GSTM4Q03013 218 aa14.66□□□□□ -0.06
EFNB1-201ENST00000204961 LMAN2Q12907 356 aa14.66□□□□□ -0.06
EFNB1-201ENST00000204961 HPS1Q92902 700 aa14.66□□□□□ -0.06
EFNB1-201ENST00000204961 TADA1Q96BN2 335 aa14.66□□□□□ -0.06
EFNB1-201ENST00000204961 TMEM169Q96HH4 297 aa14.66□□□□□ -0.06
EFNB1-201ENST00000204961 MAGED4Q96JG8 741 aa14.66□□□□□ -0.06
EFNB1-201ENST00000204961 SMAD5Q99717 465 aaKnown RBP14.66□□□□□ -0.06
EFNB1-201ENST00000204961 WRAP53Q9BUR4 548 aaKnown RBP14.66□□□□□ -0.06
EFNB1-201ENST00000204961 CD320Q9NPF0 282 aa14.66□□□□□ -0.06
EFNB1-201ENST00000204961 SPASTQ9UBP0 616 aa14.66□□□□□ -0.06
EFNB1-201ENST00000204961 PSME2Q9UL46 239 aa14.66□□□□□ -0.06
EFNB1-201ENST00000204961 VPS9D1Q9Y2B5 631 aa14.66□□□□□ -0.06
EFNB1-201ENST00000204961 TPST2O60704 377 aa14.66□□□□□ -0.06
EFNB1-201ENST00000204961 SDC1P18827 310 aa14.66□□□□□ -0.06
EFNB1-201ENST00000204961 HOXD12P35452 270 aa14.66□□□□□ -0.06
EFNB1-201ENST00000204961 MC1RQ01726 317 aa14.66□□□□□ -0.06
EFNB1-201ENST00000204961 DBPQ10586 325 aaPredicted RBP14.66□□□□□ -0.06
EFNB1-201ENST00000204961 USP39Q53GS9 565 aaKnown RBP14.66□□□□□ -0.06
EFNB1-201ENST00000204961 DPY19L3Q6ZPD9 716 aa14.66□□□□□ -0.06
EFNB1-201ENST00000204961 ADHFE1Q8IWW8 467 aa14.66□□□□□ -0.06
EFNB1-201ENST00000204961 SYTL1Q8IYJ3 562 aa14.66□□□□□ -0.06
EFNB1-201ENST00000204961 PACRGLQ8N7B6 248 aa14.66□□□□□ -0.06
EFNB1-201ENST00000204961 GTPBP3Q969Y2 492 aaKnown RBP14.66□□□□□ -0.06
EFNB1-201ENST00000204961 SPATA17Q96L03 361 aa14.66□□□□□ -0.06
EFNB1-201ENST00000204961 ERVK-11Q9UQG0 969 aa14.66□□□□□ -0.06
EFNB1-201ENST00000204961 ITM2BQ9Y287 266 aa14.66□□□□□ -0.06
EFNB1-201ENST00000204961 CFAP20Q9Y6A4 193 aaKnown RBP14.66□□□□□ -0.06
EFNB1-201ENST00000204961 C16orf96A6NNT2 1141 aa14.66□□□□□ -0.06
EFNB1-201ENST00000204961 PRAMEF4O60810 478 aa14.66□□□□□ -0.06
EFNB1-201ENST00000204961 INAQ16352 499 aa14.66□□□□□ -0.06
EFNB1-201ENST00000204961 PRAMEF9Q5VWM5 478 aa14.66□□□□□ -0.06
EFNB1-201ENST00000204961 OLIG3Q7RTU3 272 aa14.66□□□□□ -0.06
EFNB1-201ENST00000204961 MEX3DQ86XN8 651 aaKnown RBP14.66□□□□□ -0.06
EFNB1-201ENST00000204961 FAM217AQ8IXS0 508 aa14.66□□□□□ -0.06
EFNB1-201ENST00000204961 TAMM41Q96BW9 452 aa14.66□□□□□ -0.06
EFNB1-201ENST00000204961 VN1R3Q9BXE9 311 aa14.66□□□□□ -0.06
EFNB1-201ENST00000204961 KLHL25Q9H0H3 589 aa14.66□□□□□ -0.06
EFNB1-201ENST00000204961 TRIM39Q9HCM9 518 aa14.66□□□□□ -0.06
EFNB1-201ENST00000204961 HCFC1R1Q9NWW0 138 aa14.66□□□□□ -0.06
EFNB1-201ENST00000204961 C3orf18Q9UK00 162 aa14.66□□□□□ -0.06
EFNB1-201ENST00000204961 OGDHLQ9ULD0 1010 aa14.66□□□□□ -0.06
EFNB1-201ENST00000204961 CCL26Q9Y258 94 aa14.66□□□□□ -0.06
EFNB1-201ENST00000204961 H0YJX3 145 aa14.65□□□□□ -0.06
EFNB1-201ENST00000204961 UMPSP11172 480 aa14.65□□□□□ -0.06
EFNB1-201ENST00000204961 MSH3P20585 1137 aa14.65□□□□□ -0.06
EFNB1-201ENST00000204961 SLC19A1P41440 591 aa14.65□□□□□ -0.06
EFNB1-201ENST00000204961 MAGEA11P43364 429 aa14.65□□□□□ -0.06
EFNB1-201ENST00000204961 TUFMP49411 452 aaKnown RBP14.65□□□□□ -0.06
EFNB1-201ENST00000204961 RING1Q06587 406 aa14.65□□□□□ -0.06
EFNB1-201ENST00000204961 RGS21Q2M5E4 152 aa14.65□□□□□ -0.06
EFNB1-201ENST00000204961 ZNF829Q3KNS6 432 aaPredicted RBP14.65□□□□□ -0.06
EFNB1-201ENST00000204961 DDX59Q5T1V6 619 aaKnown RBP eCLIP14.65□□□□□ -0.06
EFNB1-201ENST00000204961 CRTC1Q6UUV9 634 aa14.65□□□□□ -0.06
EFNB1-201ENST00000204961 PTRH1Q86Y79 214 aaKnown RBP14.65□□□□□ -0.06
EFNB1-201ENST00000204961 PLD3Q8IV08 490 aa14.65□□□□□ -0.06
EFNB1-201ENST00000204961 TMEM132CQ8N3T6 1108 aa14.65□□□□□ -0.06
EFNB1-201ENST00000204961 ZCCHC7Q8N3Z6 543 aaKnown RBP14.65□□□□□ -0.06
EFNB1-201ENST00000204961 TTC29Q8NA56 475 aaPredicted RBP14.65□□□□□ -0.06
EFNB1-201ENST00000204961 OR13F1Q8NGS4 319 aa14.65□□□□□ -0.06
EFNB1-201ENST00000204961 OSBPL10Q9BXB5 764 aa14.65□□□□□ -0.06
EFNB1-201ENST00000204961 C5AR2Q9P296 337 aa14.65□□□□□ -0.06
EFNB1-201ENST00000204961 MTRRQ9UBK8 725 aa14.65□□□□□ -0.06
EFNB1-201ENST00000204961 PTBP2Q9UKA9 531 aaKnown RBP14.65□□□□□ -0.06
EFNB1-201ENST00000204961 MAP4K5Q9Y4K4 846 aa14.65□□□□□ -0.06
EFNB1-201ENST00000204961 ALPK2Q86TB3 2170 aa14.65□□□□□ -0.06
EFNB1-201ENST00000204961 SYNDIG1LA6NDD5 238 aa14.65□□□□□ -0.06
EFNB1-201ENST00000204961 GAPDHSO14556 408 aaPredicted RBP14.65□□□□□ -0.06
EFNB1-201ENST00000204961 TRBC1P01850 177 aa14.65□□□□□ -0.06
EFNB1-201ENST00000204961 GSTT2P0CG29 244 aa14.65□□□□□ -0.06
EFNB1-201ENST00000204961 GSTT2BP0CG30 244 aa14.65□□□□□ -0.06
EFNB1-201ENST00000204961 ETV3P41162 512 aa14.65□□□□□ -0.06
EFNB1-201ENST00000204961 KIR3DL1P43629 444 aa14.65□□□□□ -0.06
EFNB1-201ENST00000204961 GP2P55259 537 aaKnown RBP14.65□□□□□ -0.06
EFNB1-201ENST00000204961 RPS26P62854 115 aaKnown RBP14.65□□□□□ -0.06
EFNB1-201ENST00000204961 CCDC92Q53HC0 331 aaPredicted RBP14.65□□□□□ -0.06
EFNB1-201ENST00000204961 RETSATQ6NUM9 610 aa14.65□□□□□ -0.06
EFNB1-201ENST00000204961 SNX20Q7Z614 316 aa14.65□□□□□ -0.06
EFNB1-201ENST00000204961 SORBS1Q9BX66 1292 aaKnown RBP14.65□□□□□ -0.06
EFNB1-201ENST00000204961 P2RY12Q9H244 342 aa14.65□□□□□ -0.06
EFNB1-201ENST00000204961 EXOSC4Q9NPD3 245 aaKnown RBP14.65□□□□□ -0.06
EFNB1-201ENST00000204961 KRT84Q9NSB2 600 aa14.65□□□□□ -0.06
EFNB1-201ENST00000204961 SLC6A14Q9UN76 642 aa14.65□□□□□ -0.06
EFNB1-201ENST00000204961 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.64□□□□□ -0.07
EFNB1-201ENST00000204961 ANTXRLA6NF34 631 aa14.64□□□□□ -0.07
EFNB1-201ENST00000204961 YY2O15391 372 aa14.64□□□□□ -0.07
EFNB1-201ENST00000204961 TGFB1P01137 390 aa14.64□□□□□ -0.07
EFNB1-201ENST00000204961 HOXB8P17481 243 aaPredicted RBP14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms