RNA–Protein interactions for RNA: ENST00000075430.11

CTDP1-201, Transcript of CTD phosphatase subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CTDP1, Length 3,538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-201ENST00000075430 RPS14P62263 151 aaKnown RBP16.3■□□□□ 0.2
CTDP1-201ENST00000075430 TUSC3Q13454 348 aa16.3■□□□□ 0.2
CTDP1-201ENST00000075430 ZMAT1Q5H9K5 638 aa16.3■□□□□ 0.2
CTDP1-201ENST00000075430 GDPD3Q7L5L3 318 aa16.3■□□□□ 0.2
CTDP1-201ENST00000075430 MON1AQ86VX9 555 aa16.3■□□□□ 0.2
CTDP1-201ENST00000075430 AMER2Q8N7J2 671 aa16.3■□□□□ 0.2
CTDP1-201ENST00000075430 C17orf50Q8WW18 174 aa16.3■□□□□ 0.2
CTDP1-201ENST00000075430 ISG20Q96AZ6 181 aaKnown RBP16.3■□□□□ 0.2
CTDP1-201ENST00000075430 TMEM246Q9BRR3 403 aa16.3■□□□□ 0.2
CTDP1-201ENST00000075430 COQ3Q9NZJ6 369 aa16.3■□□□□ 0.2
CTDP1-201ENST00000075430 HCSTQ9UBK5 93 aa16.3■□□□□ 0.2
CTDP1-201ENST00000075430 DUSP12Q9UNI6 340 aa16.3■□□□□ 0.2
CTDP1-201ENST00000075430 ANKRD34BA5PLL1 514 aa16.29■□□□□ 0.2
CTDP1-201ENST00000075430 K7ERQ8 282 aa16.29■□□□□ 0.2
CTDP1-201ENST00000075430 SCELO95171 688 aa16.29■□□□□ 0.2
CTDP1-201ENST00000075430 CASP3P42574 277 aa16.29■□□□□ 0.2
CTDP1-201ENST00000075430 DUSP4Q13115 394 aa16.29■□□□□ 0.2
CTDP1-201ENST00000075430 NRARPQ7Z6K4 114 aa16.29■□□□□ 0.2
CTDP1-201ENST00000075430 SERPINA9Q86WD7 417 aa16.29■□□□□ 0.2
CTDP1-201ENST00000075430 DTX3Q8N9I9 347 aa16.29■□□□□ 0.2
CTDP1-201ENST00000075430 ZNF382Q96SR6 550 aa16.29■□□□□ 0.2
CTDP1-201ENST00000075430 ZNF221Q9UK13 617 aa16.29■□□□□ 0.2
CTDP1-201ENST00000075430 ARIH1Q9Y4X5 557 aaPredicted RBP16.29■□□□□ 0.2
CTDP1-201ENST00000075430 PRSS21Q9Y6M0 314 aa16.29■□□□□ 0.2
CTDP1-201ENST00000075430 FABP3P05413 133 aa16.29■□□□□ 0.2
CTDP1-201ENST00000075430 EPB42P16452 691 aa16.29■□□□□ 0.2
CTDP1-201ENST00000075430 SLC26A3P40879 764 aa16.29■□□□□ 0.2
CTDP1-201ENST00000075430 ZNF135P52742 658 aaPredicted RBP16.29■□□□□ 0.2
CTDP1-201ENST00000075430 CDH12P55289 794 aa16.29■□□□□ 0.2
CTDP1-201ENST00000075430 PCBP1Q15365 356 aaKnown RBP eCLIP16.29■□□□□ 0.2
CTDP1-201ENST00000075430 CARNMT1Q8N4J0 409 aa16.29■□□□□ 0.2
CTDP1-201ENST00000075430 PPP1R2P1Q96PQ5 205 aa16.29■□□□□ 0.2
CTDP1-201ENST00000075430 TRNT1Q96Q11 434 aaKnown RBP16.29■□□□□ 0.2
CTDP1-201ENST00000075430 SNTG1Q9NSN8 517 aa16.29■□□□□ 0.2
CTDP1-201ENST00000075430 KIAA1522Q9P206 1035 aaPredicted RBP16.29■□□□□ 0.2
CTDP1-201ENST00000075430 PCDH10Q9P2E7 1040 aa16.29■□□□□ 0.2
CTDP1-201ENST00000075430 MOSPD1Q9UJG1 213 aa16.29■□□□□ 0.2
CTDP1-201ENST00000075430 KLHL20Q9Y2M5 609 aa16.29■□□□□ 0.2
CTDP1-201ENST00000075430 WWP2O00308 870 aa16.29■□□□□ 0.2
CTDP1-201ENST00000075430 SH3BP5O60239 455 aa16.29■□□□□ 0.2
CTDP1-201ENST00000075430 B4GALT3O60512 393 aa16.29■□□□□ 0.2
CTDP1-201ENST00000075430 PRAMEF1O95521 474 aa16.29■□□□□ 0.2
CTDP1-201ENST00000075430 CCDC159P0C7I6 412 aa16.29■□□□□ 0.2
CTDP1-201ENST00000075430 TTPAP49638 278 aa16.29■□□□□ 0.2
CTDP1-201ENST00000075430 GATMP50440 423 aa16.29■□□□□ 0.2
CTDP1-201ENST00000075430 SNRPD2P62316 118 aaKnown RBP16.29■□□□□ 0.2
CTDP1-201ENST00000075430 IL10RBQ08334 325 aa16.29■□□□□ 0.2
CTDP1-201ENST00000075430 ZFP69Q49AA0 526 aa16.29■□□□□ 0.2
CTDP1-201ENST00000075430 LRRC66Q68CR7 880 aa16.29■□□□□ 0.2
CTDP1-201ENST00000075430 HS6ST3Q8IZP7 471 aa16.29■□□□□ 0.2
CTDP1-201ENST00000075430 GOLM1Q8NBJ4 401 aa16.29■□□□□ 0.2
CTDP1-201ENST00000075430 CSNK1G1Q9HCP0 422 aa16.29■□□□□ 0.2
CTDP1-201ENST00000075430 RLIMQ9NVW2 624 aa16.29■□□□□ 0.2
CTDP1-201ENST00000075430 CLIC1O00299 241 aa16.28■□□□□ 0.2
CTDP1-201ENST00000075430 FPGTO14772 594 aa16.28■□□□□ 0.2
CTDP1-201ENST00000075430 PDYNP01213 254 aa16.28■□□□□ 0.2
CTDP1-201ENST00000075430 RHOCP08134 193 aa16.28■□□□□ 0.2
CTDP1-201ENST00000075430 PRR35P0CG20 571 aa16.28■□□□□ 0.2
CTDP1-201ENST00000075430 RPL17P18621 184 aaKnown RBP16.28■□□□□ 0.2
CTDP1-201ENST00000075430 OGNP20774 298 aaKnown RBP16.28■□□□□ 0.2
CTDP1-201ENST00000075430 PAX3P23760 479 aa16.28■□□□□ 0.2
CTDP1-201ENST00000075430 CAMK2GQ13555 558 aaPredicted RBP16.28■□□□□ 0.2
CTDP1-201ENST00000075430 MAD2L1BPQ15013 274 aaPredicted RBP16.28■□□□□ 0.2
CTDP1-201ENST00000075430 TSTQ16762 297 aaKnown RBP16.28■□□□□ 0.2
CTDP1-201ENST00000075430 COQ5Q5HYK3 327 aa16.28■□□□□ 0.2
CTDP1-201ENST00000075430 SYT12Q8IV01 421 aa16.28■□□□□ 0.2
CTDP1-201ENST00000075430 APIPQ96GX9 242 aa16.28■□□□□ 0.2
CTDP1-201ENST00000075430 CTRCQ99895 268 aa16.28■□□□□ 0.2
CTDP1-201ENST00000075430 ITPAQ9BY32 194 aa16.28■□□□□ 0.2
CTDP1-201ENST00000075430 FAM227AF5H4B4 570 aa16.28■□□□□ 0.2
CTDP1-201ENST00000075430 RFXAPO00287 272 aa16.28■□□□□ 0.2
CTDP1-201ENST00000075430 AREL1O15033 823 aa16.28■□□□□ 0.2
CTDP1-201ENST00000075430 INSIG1O15503 277 aa16.28■□□□□ 0.2
CTDP1-201ENST00000075430 PTHP01270 115 aa16.28■□□□□ 0.2
CTDP1-201ENST00000075430 COX7A2P14406 83 aa16.28■□□□□ 0.2
CTDP1-201ENST00000075430 TACR2P21452 398 aa16.28■□□□□ 0.2
CTDP1-201ENST00000075430 CRATP43155 626 aa16.28■□□□□ 0.2
CTDP1-201ENST00000075430 NPRL3Q12980 569 aa16.28■□□□□ 0.2
CTDP1-201ENST00000075430 CRHR2Q13324 411 aa16.28■□□□□ 0.2
CTDP1-201ENST00000075430 CCDC71Q8IV32 467 aaPredicted RBP16.28■□□□□ 0.2
CTDP1-201ENST00000075430 CAMKK1Q8N5S9 505 aa16.28■□□□□ 0.2
CTDP1-201ENST00000075430 BTN2A3PQ96KV6 586 aa16.28■□□□□ 0.2
CTDP1-201ENST00000075430 FEVQ99581 238 aa16.28■□□□□ 0.2
CTDP1-201ENST00000075430 SH3GL1Q99961 368 aa16.28■□□□□ 0.2
CTDP1-201ENST00000075430 TMEM121BQ9BXQ6 578 aaPredicted RBP16.28■□□□□ 0.2
CTDP1-201ENST00000075430 TLR8Q9NR97 1041 aaKnown RBP16.28■□□□□ 0.2
CTDP1-201ENST00000075430 N6AMT1Q9Y5N5 214 aa16.28■□□□□ 0.2
CTDP1-201ENST00000075430 ZW10O43264 779 aa16.28■□□□□ 0.2
CTDP1-201ENST00000075430 NUAK1O60285 661 aa16.28■□□□□ 0.2
CTDP1-201ENST00000075430 WISP3O95389 354 aaPredicted RBP16.28■□□□□ 0.2
CTDP1-201ENST00000075430 RPL9P32969 192 aaKnown RBP16.28■□□□□ 0.2
CTDP1-201ENST00000075430 SLC19A1P41440 591 aa16.28■□□□□ 0.2
CTDP1-201ENST00000075430 DEFA1P59665 94 aa16.28■□□□□ 0.2
CTDP1-201ENST00000075430 DEFA3P59666 94 aa16.28■□□□□ 0.2
CTDP1-201ENST00000075430 ZNF33AQ06730 810 aa16.28■□□□□ 0.2
CTDP1-201ENST00000075430 ST3GAL4Q11206 333 aa16.28■□□□□ 0.2
CTDP1-201ENST00000075430 RNF219Q5W0B1 726 aaPredicted RBP16.28■□□□□ 0.2
CTDP1-201ENST00000075430 HMGN2P46Q86SG4 172 aa16.28■□□□□ 0.2
CTDP1-201ENST00000075430 TRPV1Q8NER1 839 aa16.28■□□□□ 0.2
CTDP1-201ENST00000075430 COPS8Q99627 209 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms