RNA–Protein interactions for RNA: ENST00000066544.7

CDC27-201, Transcript of cell division cycle 27, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDC27, Length 5,801 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-201ENST00000066544 CD9P21926 228 aa8.05□□□□□ -1.12
CDC27-201ENST00000066544 GP2P55259 537 aaKnown RBP8.05□□□□□ -1.12
CDC27-201ENST00000066544 MTA1Q13330 715 aa8.05□□□□□ -1.12
CDC27-201ENST00000066544 NAE1Q13564 534 aa8.05□□□□□ -1.12
CDC27-201ENST00000066544 MOGQ16653 247 aa8.05□□□□□ -1.12
CDC27-201ENST00000066544 LHX8Q68G74 356 aa8.05□□□□□ -1.12
CDC27-201ENST00000066544 NOXRED1Q6NXP6 359 aa8.05□□□□□ -1.12
CDC27-201ENST00000066544 DCDC5Q6ZRR9 648 aa8.05□□□□□ -1.12
CDC27-201ENST00000066544 TRIM46Q7Z4K8 759 aa8.05□□□□□ -1.12
CDC27-201ENST00000066544 IGFN1Q86VF2 1251 aa8.05□□□□□ -1.12
CDC27-201ENST00000066544 DOK1Q99704 481 aa8.05□□□□□ -1.12
CDC27-201ENST00000066544 NTMT1Q9BV86 223 aa8.05□□□□□ -1.12
CDC27-201ENST00000066544 RAPGEFL1Q9UHV5 662 aa8.05□□□□□ -1.12
CDC27-201ENST00000066544 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP8.05□□□□□ -1.12
CDC27-201ENST00000066544 SNX6Q9UNH7 406 aa8.05□□□□□ -1.12
CDC27-201ENST00000066544 MT-ND2P03891 347 aa8.05□□□□□ -1.12
CDC27-201ENST00000066544 LAMP1P11279 417 aa8.05□□□□□ -1.12
CDC27-201ENST00000066544 GSTM2P28161 218 aa8.05□□□□□ -1.12
CDC27-201ENST00000066544 TMBIM6P55061 237 aa8.05□□□□□ -1.12
CDC27-201ENST00000066544 RBM48Q5RL73 367 aaKnown RBP8.05□□□□□ -1.12
CDC27-201ENST00000066544 FRG2Q64ET8 278 aa8.05□□□□□ -1.12
CDC27-201ENST00000066544 CPZQ66K79 652 aa8.05□□□□□ -1.12
CDC27-201ENST00000066544 FAM43BQ6ZT52 329 aaPredicted RBP8.05□□□□□ -1.12
CDC27-201ENST00000066544 AADATQ8N5Z0 425 aa8.05□□□□□ -1.12
CDC27-201ENST00000066544 COX4I2Q96KJ9 171 aa8.05□□□□□ -1.12
CDC27-201ENST00000066544 CCDC115Q96NT0 180 aa8.05□□□□□ -1.12
CDC27-201ENST00000066544 FRG2BQ96QU4 278 aa8.05□□□□□ -1.12
CDC27-201ENST00000066544 THG1LQ9NWX6 298 aaKnown RBP8.05□□□□□ -1.12
CDC27-201ENST00000066544 ZDHHC3Q9NYG2 299 aa8.05□□□□□ -1.12
CDC27-201ENST00000066544 SAP18O00422 153 aaKnown RBP8.05□□□□□ -1.12
CDC27-201ENST00000066544 SRCP12931 536 aa8.05□□□□□ -1.12
CDC27-201ENST00000066544 MAGP20916 626 aa8.05□□□□□ -1.12
CDC27-201ENST00000066544 RPS3P23396 243 aaKnown RBP eCLIP8.05□□□□□ -1.12
CDC27-201ENST00000066544 MRPL19P49406 292 aaKnown RBP8.05□□□□□ -1.12
CDC27-201ENST00000066544 ARHGDIAP52565 204 aa8.05□□□□□ -1.12
CDC27-201ENST00000066544 TRIM16LQ309B1 348 aa8.05□□□□□ -1.12
CDC27-201ENST00000066544 GTF2IRD2BQ6EKJ0 949 aa8.05□□□□□ -1.12
CDC27-201ENST00000066544 GTF2IRD2Q86UP8 949 aa8.05□□□□□ -1.12
CDC27-201ENST00000066544 NDNFQ8TB73 568 aa8.05□□□□□ -1.12
CDC27-201ENST00000066544 SPPL2AQ8TCT8 520 aa8.05□□□□□ -1.12
CDC27-201ENST00000066544 USP7Q93009 1102 aa8.05□□□□□ -1.12
CDC27-201ENST00000066544 REXO5Q96IC2 774 aaKnown RBP8.05□□□□□ -1.12
CDC27-201ENST00000066544 KCNH6Q9H252 994 aa8.05□□□□□ -1.12
CDC27-201ENST00000066544 ELAC1Q9H777 363 aaKnown RBP8.05□□□□□ -1.12
CDC27-201ENST00000066544 DAPK2Q9UIK4 370 aa8.05□□□□□ -1.12
CDC27-201ENST00000066544 INSL5Q9Y5Q6 135 aa8.05□□□□□ -1.12
CDC27-201ENST00000066544 FAM20BO75063 409 aa8.04□□□□□ -1.12
CDC27-201ENST00000066544 OR56A5P0C7T3 313 aa8.04□□□□□ -1.12
CDC27-201ENST00000066544 PTSQ03393 145 aa8.04□□□□□ -1.12
CDC27-201ENST00000066544 ACSM2AQ08AH3 577 aa8.04□□□□□ -1.12
CDC27-201ENST00000066544 CARTPTQ16568 116 aa8.04□□□□□ -1.12
CDC27-201ENST00000066544 ACSM2BQ68CK6 577 aa8.04□□□□□ -1.12
CDC27-201ENST00000066544 OR2T5Q6IEZ7 315 aa8.04□□□□□ -1.12
CDC27-201ENST00000066544 MACC1Q6ZN28 852 aa8.04□□□□□ -1.12
CDC27-201ENST00000066544 GAREM2Q75VX8 874 aa8.04□□□□□ -1.12
CDC27-201ENST00000066544 OR2T29Q8NH02 315 aa8.04□□□□□ -1.12
CDC27-201ENST00000066544 MRPS31Q92665 395 aaKnown RBP8.04□□□□□ -1.12
CDC27-201ENST00000066544 HSH2DQ96JZ2 352 aa8.04□□□□□ -1.12
CDC27-201ENST00000066544 SUV39H2Q9H5I1 410 aa8.04□□□□□ -1.12
CDC27-201ENST00000066544 TMEM9Q9P0T7 183 aa8.04□□□□□ -1.12
CDC27-201ENST00000066544 GBF1Q92538 1859 aa8.04□□□□□ -1.12
CDC27-201ENST00000066544 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP8.04□□□□□ -1.12
CDC27-201ENST00000066544 M0R129 80 aa8.04□□□□□ -1.12
CDC27-201ENST00000066544 ACPPP15309 386 aa8.04□□□□□ -1.12
CDC27-201ENST00000066544 DAPP51397 102 aa8.04□□□□□ -1.12
CDC27-201ENST00000066544 NUDT6P53370 316 aa8.04□□□□□ -1.12
CDC27-201ENST00000066544 ABHD18Q0P651 414 aa8.04□□□□□ -1.12
CDC27-201ENST00000066544 PRR23BQ6ZRT6 265 aa8.04□□□□□ -1.12
CDC27-201ENST00000066544 TPRG1Q6ZUI0 275 aa8.04□□□□□ -1.12
CDC27-201ENST00000066544 SVOPLQ8N434 492 aa8.04□□□□□ -1.12
CDC27-201ENST00000066544 PIK3C3Q8NEB9 887 aa8.04□□□□□ -1.12
CDC27-201ENST00000066544 ZFP90Q8TF47 636 aa8.04□□□□□ -1.12
CDC27-201ENST00000066544 ALOXE3Q9BYJ1 711 aa8.04□□□□□ -1.12
CDC27-201ENST00000066544 ROGDIQ9GZN7 287 aa8.04□□□□□ -1.12
CDC27-201ENST00000066544 POLE4Q9NR33 117 aa8.04□□□□□ -1.12
CDC27-201ENST00000066544 MRPL17Q9NRX2 175 aaKnown RBP8.04□□□□□ -1.12
CDC27-201ENST00000066544 DNAJC11Q9NVH1 559 aa8.04□□□□□ -1.12
CDC27-201ENST00000066544 CHCHD3Q9NX63 227 aaKnown RBP8.04□□□□□ -1.12
CDC27-201ENST00000066544 TESMINQ9Y4I5 508 aa8.04□□□□□ -1.12
CDC27-201ENST00000066544 A0A096LPI6 279 aa8.04□□□□□ -1.12
CDC27-201ENST00000066544 TRBV5-3A0A0A0MS03 114 aa8.04□□□□□ -1.12
CDC27-201ENST00000066544 GNG14A0A1W2PPG7 69 aa8.04□□□□□ -1.12
CDC27-201ENST00000066544 ZNF99A8MXY4 864 aaPredicted RBP8.04□□□□□ -1.12
CDC27-201ENST00000066544 YY2O15391 372 aa8.04□□□□□ -1.12
CDC27-201ENST00000066544 ZNF821O75541 412 aaPredicted RBP8.04□□□□□ -1.12
CDC27-201ENST00000066544 URODP06132 367 aa8.04□□□□□ -1.12
CDC27-201ENST00000066544 LCKP06239 509 aa8.04□□□□□ -1.12
CDC27-201ENST00000066544 PSMA3P25788 255 aa8.04□□□□□ -1.12
CDC27-201ENST00000066544 AOAHP28039 575 aa8.04□□□□□ -1.12
CDC27-201ENST00000066544 HLA-FP30511 346 aa8.04□□□□□ -1.12
CDC27-201ENST00000066544 GRSF1Q12849 480 aaKnown RBP eCLIP8.04□□□□□ -1.12
CDC27-201ENST00000066544 HKDC1Q2TB90 917 aa8.04□□□□□ -1.12
CDC27-201ENST00000066544 ATG9BQ674R7 924 aa8.04□□□□□ -1.12
CDC27-201ENST00000066544 HIPK1Q86Z02 1210 aa8.04□□□□□ -1.12
CDC27-201ENST00000066544 TTC29Q8NA56 475 aaPredicted RBP8.04□□□□□ -1.12
CDC27-201ENST00000066544 OR4K1Q8NGD4 311 aa8.04□□□□□ -1.12
CDC27-201ENST00000066544 KRT84Q9NSB2 600 aa8.04□□□□□ -1.12
CDC27-201ENST00000066544 HOXA2O43364 376 aa8.04□□□□□ -1.12
CDC27-201ENST00000066544 EPN2O95208 641 aa8.04□□□□□ -1.12
CDC27-201ENST00000066544 VIPP01282 170 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms