RNA–Protein interactions for RNA: ENST00000035307.6

CHPF2-201, Transcript of chondroitin polymerizing factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHPF2, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-201ENST00000035307 MANFP55145 182 aaKnown RBP11.74□□□□□ -0.53
CHPF2-201ENST00000035307 CDH12P55289 794 aa11.74□□□□□ -0.53
CHPF2-201ENST00000035307 MESP2Q0VG99 397 aa11.74□□□□□ -0.53
CHPF2-201ENST00000035307 C1orf61Q13536 156 aa11.74□□□□□ -0.53
CHPF2-201ENST00000035307 ZNF234Q14588 700 aa11.74□□□□□ -0.53
CHPF2-201ENST00000035307 PHKG1Q16816 387 aa11.74□□□□□ -0.53
CHPF2-201ENST00000035307 SYT16Q17RD7 645 aa11.74□□□□□ -0.53
CHPF2-201ENST00000035307 KCTD11Q693B1 232 aa11.74□□□□□ -0.53
CHPF2-201ENST00000035307 MTSS1LQ765P7 747 aa11.74□□□□□ -0.53
CHPF2-201ENST00000035307 VN1R5Q7Z5H4 357 aa11.74□□□□□ -0.53
CHPF2-201ENST00000035307 HSD11B1LQ7Z5J1 315 aa11.74□□□□□ -0.53
CHPF2-201ENST00000035307 ZNF605Q86T29 641 aa11.74□□□□□ -0.53
CHPF2-201ENST00000035307 C12orf40Q86WS4 652 aa11.74□□□□□ -0.53
CHPF2-201ENST00000035307 LILRA3Q8N6C8 439 aaPredicted RBP11.74□□□□□ -0.53
CHPF2-201ENST00000035307 C1orf52Q8N6N3 182 aaKnown RBP11.74□□□□□ -0.53
CHPF2-201ENST00000035307 C10orf53Q8N6V4 93 aa11.74□□□□□ -0.53
CHPF2-201ENST00000035307 ARL10Q8N8L6 244 aa11.74□□□□□ -0.53
CHPF2-201ENST00000035307 SMYD1Q8NB12 490 aa11.74□□□□□ -0.53
CHPF2-201ENST00000035307 GIPC3Q8TF64 312 aa11.74□□□□□ -0.53
CHPF2-201ENST00000035307 PROX1Q92786 737 aa11.74□□□□□ -0.53
CHPF2-201ENST00000035307 ROPN1LQ96C74 230 aa11.74□□□□□ -0.53
CHPF2-201ENST00000035307 OR51B5Q9H339 312 aa11.74□□□□□ -0.53
CHPF2-201ENST00000035307 FNIP2Q9P278 1114 aa11.74□□□□□ -0.53
CHPF2-201ENST00000035307 TPRKBQ9Y3C4 175 aa11.74□□□□□ -0.53
CHPF2-201ENST00000035307 PRSS21Q9Y6M0 314 aa11.74□□□□□ -0.53
CHPF2-201ENST00000035307 BDP1A6H8Y1 2624 aa11.74□□□□□ -0.53
CHPF2-201ENST00000035307 ANK1P16157 1881 aa11.73□□□□□ -0.53
CHPF2-201ENST00000035307 ANGPTL1O95841 491 aa11.73□□□□□ -0.53
CHPF2-201ENST00000035307 PGRP06401 933 aa11.73□□□□□ -0.53
CHPF2-201ENST00000035307 CCNA2P20248 432 aa11.73□□□□□ -0.53
CHPF2-201ENST00000035307 SLC6A2P23975 617 aa11.73□□□□□ -0.53
CHPF2-201ENST00000035307 VARSP26640 1264 aaKnown RBP11.73□□□□□ -0.53
CHPF2-201ENST00000035307 BUD31P41223 144 aaPredicted RBP11.73□□□□□ -0.53
CHPF2-201ENST00000035307 PSMD7P51665 324 aa11.73□□□□□ -0.53
CHPF2-201ENST00000035307 BNIP3Q12983 259 aa11.73□□□□□ -0.53
CHPF2-201ENST00000035307 PAGE2BQ5JRK9 111 aa11.73□□□□□ -0.53
CHPF2-201ENST00000035307 MANEALQ5VSG8 457 aa11.73□□□□□ -0.53
CHPF2-201ENST00000035307 FAM20CQ8IXL6 584 aa11.73□□□□□ -0.53
CHPF2-201ENST00000035307 REXO4Q9GZR2 422 aaKnown RBP11.73□□□□□ -0.53
CHPF2-201ENST00000035307 DPEP2Q9H4A9 486 aa11.73□□□□□ -0.53
CHPF2-201ENST00000035307 DMTF1Q9Y222 760 aa11.73□□□□□ -0.53
CHPF2-201ENST00000035307 UNC80Q8N2C7 3258 aa11.73□□□□□ -0.53
CHPF2-201ENST00000035307 CACNA1HO95180 2353 aa11.73□□□□□ -0.53
CHPF2-201ENST00000035307 BCKDKO14874 412 aa11.73□□□□□ -0.53
CHPF2-201ENST00000035307 NR2F1P10589 423 aa11.73□□□□□ -0.53
CHPF2-201ENST00000035307 ELK4P28324 431 aa11.73□□□□□ -0.53
CHPF2-201ENST00000035307 XIAPP98170 497 aa11.73□□□□□ -0.53
CHPF2-201ENST00000035307 ZNF423Q2M1K9 1284 aa11.73□□□□□ -0.53
CHPF2-201ENST00000035307 ITPRIPL2Q3MIP1 535 aa11.73□□□□□ -0.53
CHPF2-201ENST00000035307 PAGE3Q5JUK9 113 aa11.73□□□□□ -0.53
CHPF2-201ENST00000035307 FAM46CQ5VWP2 391 aa11.73□□□□□ -0.53
CHPF2-201ENST00000035307 SULT1C3Q6IMI6 304 aa11.73□□□□□ -0.53
CHPF2-201ENST00000035307 TMEM150AQ86TG1 271 aa11.73□□□□□ -0.53
CHPF2-201ENST00000035307 HS3ST5Q8IZT8 346 aa11.73□□□□□ -0.53
CHPF2-201ENST00000035307 TMIGD2Q96BF3 282 aa11.73□□□□□ -0.53
CHPF2-201ENST00000035307 DTNBP1Q96EV8 351 aa11.73□□□□□ -0.53
CHPF2-201ENST00000035307 NLNQ9BYT8 704 aa11.73□□□□□ -0.53
CHPF2-201ENST00000035307 GSTO2Q9H4Y5 243 aa11.73□□□□□ -0.53
CHPF2-201ENST00000035307 NLE1Q9NVX2 485 aaPredicted RBP11.73□□□□□ -0.53
CHPF2-201ENST00000035307 LHX3Q9UBR4 397 aa11.73□□□□□ -0.53
CHPF2-201ENST00000035307 PRUNE2Q8WUY3 3088 aa11.73□□□□□ -0.53
CHPF2-201ENST00000035307 FAM234BA2RU67 622 aa11.73□□□□□ -0.53
CHPF2-201ENST00000035307 GSAPA4D1B5 854 aa11.73□□□□□ -0.53
CHPF2-201ENST00000035307 PRRT4C9JH25 899 aa11.73□□□□□ -0.53
CHPF2-201ENST00000035307 POP7O75817 140 aaKnown RBP11.73□□□□□ -0.53
CHPF2-201ENST00000035307 FGF19O95750 216 aa11.73□□□□□ -0.53
CHPF2-201ENST00000035307 SLC35G4P0C7Q5 338 aa11.73□□□□□ -0.53
CHPF2-201ENST00000035307 ZNF8P17098 575 aaPredicted RBP11.73□□□□□ -0.53
CHPF2-201ENST00000035307 MNX1P50219 401 aaPredicted RBP11.73□□□□□ -0.53
CHPF2-201ENST00000035307 CLCNKAP51800 687 aa11.73□□□□□ -0.53
CHPF2-201ENST00000035307 RFTN2Q52LD8 501 aaPredicted RBP11.73□□□□□ -0.53
CHPF2-201ENST00000035307 INO80DQ53TQ3 878 aaPredicted RBP11.73□□□□□ -0.53
CHPF2-201ENST00000035307 GALNT18Q6P9A2 607 aa11.73□□□□□ -0.53
CHPF2-201ENST00000035307 HTR3DQ70Z44 454 aa11.73□□□□□ -0.53
CHPF2-201ENST00000035307 BEND5Q7L4P6 421 aa11.73□□□□□ -0.53
CHPF2-201ENST00000035307 NXPE1Q8N323 547 aa11.73□□□□□ -0.53
CHPF2-201ENST00000035307 TBC1D19Q8N5T2 526 aa11.73□□□□□ -0.53
CHPF2-201ENST00000035307 DPH2Q9BQC3 489 aaPredicted RBP11.73□□□□□ -0.53
CHPF2-201ENST00000035307 DERL2Q9GZP9 239 aa11.73□□□□□ -0.53
CHPF2-201ENST00000035307 MARCH7Q9H992 704 aa11.73□□□□□ -0.53
CHPF2-201ENST00000035307 GALNT8Q9NY28 637 aa11.73□□□□□ -0.53
CHPF2-201ENST00000035307 GULP1Q9UBP9 304 aa11.73□□□□□ -0.53
CHPF2-201ENST00000035307 A0A1W2PPW3 197 aa11.72□□□□□ -0.53
CHPF2-201ENST00000035307 KLHL33A6NCF5 533 aa11.72□□□□□ -0.53
CHPF2-201ENST00000035307 FAM220BPB1ANY3 271 aa11.72□□□□□ -0.53
CHPF2-201ENST00000035307 HTRA2O43464 458 aaPredicted RBP11.72□□□□□ -0.53
CHPF2-201ENST00000035307 ATG13O75143 517 aa11.72□□□□□ -0.53
CHPF2-201ENST00000035307 TNNI3P19429 210 aa11.72□□□□□ -0.53
CHPF2-201ENST00000035307 SSR2P43308 183 aa11.72□□□□□ -0.53
CHPF2-201ENST00000035307 ERVPABLB-1P60509 514 aa11.72□□□□□ -0.53
CHPF2-201ENST00000035307 GPAT3Q53EU6 434 aa11.72□□□□□ -0.53
CHPF2-201ENST00000035307 IER5LQ5T953 404 aa11.72□□□□□ -0.53
CHPF2-201ENST00000035307 ENPP7Q6UWV6 458 aa11.72□□□□□ -0.53
CHPF2-201ENST00000035307 CYS1Q717R9 158 aa11.72□□□□□ -0.53
CHPF2-201ENST00000035307 ZNF761Q86XN6 746 aaPredicted RBP11.72□□□□□ -0.53
CHPF2-201ENST00000035307 MFSD6LQ8IWD5 586 aa11.72□□□□□ -0.53
CHPF2-201ENST00000035307 FUBP1Q96AE4 644 aaKnown RBP11.72□□□□□ -0.53
CHPF2-201ENST00000035307 MYRFLQ96LU7 910 aa11.72□□□□□ -0.53
CHPF2-201ENST00000035307 RAD21L1Q9H4I0 556 aa11.72□□□□□ -0.53
CHPF2-201ENST00000035307 AASSQ9UDR5 926 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms