RNA–Protein interactions for RNA: ENST00000006053.6

CX3CL1-201, Transcript of C-X3-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CX3CL1, Length 3,321 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1-201ENST00000006053 SNPHO15079 494 aa10.23□□□□□ -0.77
CX3CL1-201ENST00000006053 KDELR3O43731 214 aa10.23□□□□□ -0.77
CX3CL1-201ENST00000006053 ICMTO60725 284 aa10.23□□□□□ -0.77
CX3CL1-201ENST00000006053 TSPAN9O75954 239 aa10.23□□□□□ -0.77
CX3CL1-201ENST00000006053 GLUD1P00367 558 aa10.23□□□□□ -0.77
CX3CL1-201ENST00000006053 IGLV3-27P01718 113 aa10.23□□□□□ -0.77
CX3CL1-201ENST00000006053 ZNF7P17097 686 aaPredicted RBP10.23□□□□□ -0.77
CX3CL1-201ENST00000006053 ACVR2AP27037 513 aa10.23□□□□□ -0.77
CX3CL1-201ENST00000006053 GTF2E2P29084 291 aaKnown RBP10.23□□□□□ -0.77
CX3CL1-201ENST00000006053 SGSHP51688 502 aa10.23□□□□□ -0.77
CX3CL1-201ENST00000006053 CACNG1Q06432 222 aa10.23□□□□□ -0.77
CX3CL1-201ENST00000006053 FAM171A1Q5VUB5 890 aa10.23□□□□□ -0.77
CX3CL1-201ENST00000006053 SPRYD7Q5W111 196 aa10.23□□□□□ -0.77
CX3CL1-201ENST00000006053 CST9Q5W186 159 aa10.23□□□□□ -0.77
CX3CL1-201ENST00000006053 OR4F3Q6IEY1 312 aa10.23□□□□□ -0.77
CX3CL1-201ENST00000006053 GLB1LQ6UWU2 654 aa10.23□□□□□ -0.77
CX3CL1-201ENST00000006053 Q6ZPB1 254 aaPredicted RBP10.23□□□□□ -0.77
CX3CL1-201ENST00000006053 ZNF551Q7Z340 670 aaPredicted RBP10.23□□□□□ -0.77
CX3CL1-201ENST00000006053 SNX20Q7Z614 316 aa10.23□□□□□ -0.77
CX3CL1-201ENST00000006053 SERINC5Q86VE9 423 aa10.23□□□□□ -0.77
CX3CL1-201ENST00000006053 MMAAQ8IVH4 418 aaKnown RBP10.23□□□□□ -0.77
CX3CL1-201ENST00000006053 P3H2Q8IVL5 708 aa10.23□□□□□ -0.77
CX3CL1-201ENST00000006053 CLIP4Q8N3C7 705 aa10.23□□□□□ -0.77
CX3CL1-201ENST00000006053 OR52E4Q8NGH9 312 aa10.23□□□□□ -0.77
CX3CL1-201ENST00000006053 OR6K2Q8NGY2 324 aa10.23□□□□□ -0.77
CX3CL1-201ENST00000006053 KCNH6Q9H252 994 aa10.23□□□□□ -0.77
CX3CL1-201ENST00000006053 CRISPLD1Q9H336 500 aa10.23□□□□□ -0.77
CX3CL1-201ENST00000006053 ASB8Q9H765 288 aa10.23□□□□□ -0.77
CX3CL1-201ENST00000006053 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP10.23□□□□□ -0.77
CX3CL1-201ENST00000006053 LOC100506127A0A0U1RQW1 187 aa10.23□□□□□ -0.77
CX3CL1-201ENST00000006053 EVPLLA8MZ36 301 aa10.23□□□□□ -0.77
CX3CL1-201ENST00000006053 AIREO43918 545 aa10.23□□□□□ -0.77
CX3CL1-201ENST00000006053 OAZ2O95190 189 aa10.23□□□□□ -0.77
CX3CL1-201ENST00000006053 PRAMEF1O95521 474 aa10.23□□□□□ -0.77
CX3CL1-201ENST00000006053 FABP3P05413 133 aa10.23□□□□□ -0.77
CX3CL1-201ENST00000006053 IRF1P10914 325 aa10.23□□□□□ -0.77
CX3CL1-201ENST00000006053 EFNA1P20827 205 aaPredicted RBP10.23□□□□□ -0.77
CX3CL1-201ENST00000006053 EIF2DP41214 584 aaKnown RBP10.23□□□□□ -0.77
CX3CL1-201ENST00000006053 GZMMP51124 257 aa10.23□□□□□ -0.77
CX3CL1-201ENST00000006053 FAM189BP81408 668 aa10.23□□□□□ -0.77
CX3CL1-201ENST00000006053 VLDLRP98155 873 aa10.23□□□□□ -0.77
CX3CL1-201ENST00000006053 CREMQ03060 361 aa10.23□□□□□ -0.77
CX3CL1-201ENST00000006053 MGAT3Q09327 533 aa10.23□□□□□ -0.77
CX3CL1-201ENST00000006053 ABHD18Q0P651 414 aa10.23□□□□□ -0.77
CX3CL1-201ENST00000006053 ZNF177Q13360 481 aaPredicted RBP10.23□□□□□ -0.77
CX3CL1-201ENST00000006053 KEAP1Q14145 624 aa10.23□□□□□ -0.77
CX3CL1-201ENST00000006053 CCDC58Q4VC31 144 aa10.23□□□□□ -0.77
CX3CL1-201ENST00000006053 ATAD3BQ5T9A4 648 aa10.23□□□□□ -0.77
CX3CL1-201ENST00000006053 RNF219Q5W0B1 726 aaPredicted RBP10.23□□□□□ -0.77
CX3CL1-201ENST00000006053 KDM4DQ6B0I6 523 aa10.23□□□□□ -0.77
CX3CL1-201ENST00000006053 CAPN13Q6MZZ7 669 aaPredicted RBP10.23□□□□□ -0.77
CX3CL1-201ENST00000006053 TPD52L3Q96J77 140 aa10.23□□□□□ -0.77
CX3CL1-201ENST00000006053 ACPTQ9BZG2 426 aa10.23□□□□□ -0.77
CX3CL1-201ENST00000006053 SERHLQ9NQF3 203 aa10.23□□□□□ -0.77
CX3CL1-201ENST00000006053 PCDH10Q9P2E7 1040 aa10.23□□□□□ -0.77
CX3CL1-201ENST00000006053 AP3M1Q9Y2T2 418 aa10.23□□□□□ -0.77
CX3CL1-201ENST00000006053 TDRD15B5MCY1 1934 aaKnown RBP10.23□□□□□ -0.77
CX3CL1-201ENST00000006053 A0A096LPI6 279 aa10.23□□□□□ -0.77
CX3CL1-201ENST00000006053 TBKBP1A7MCY6 615 aa10.23□□□□□ -0.77
CX3CL1-201ENST00000006053 KMOO15229 486 aa10.23□□□□□ -0.77
CX3CL1-201ENST00000006053 UPK1BO75841 260 aa10.23□□□□□ -0.77
CX3CL1-201ENST00000006053 PDYNP01213 254 aa10.23□□□□□ -0.77
CX3CL1-201ENST00000006053 VIPP01282 170 aa10.23□□□□□ -0.77
CX3CL1-201ENST00000006053 CD9P21926 228 aa10.23□□□□□ -0.77
CX3CL1-201ENST00000006053 C21orf33P30042 268 aaPredicted RBP10.23□□□□□ -0.77
CX3CL1-201ENST00000006053 DNAJA1P31689 397 aaKnown RBP10.23□□□□□ -0.77
CX3CL1-201ENST00000006053 LIPAP38571 399 aa10.23□□□□□ -0.77
CX3CL1-201ENST00000006053 CDH4P55283 916 aa10.23□□□□□ -0.77
CX3CL1-201ENST00000006053 RPP38P78345 283 aaKnown RBP10.23□□□□□ -0.77
CX3CL1-201ENST00000006053 PLEKHG6Q3KR16 790 aa10.23□□□□□ -0.77
CX3CL1-201ENST00000006053 ZNF404Q494X3 552 aa10.23□□□□□ -0.77
CX3CL1-201ENST00000006053 ATXN7L2Q5T6C5 722 aaPredicted RBP10.23□□□□□ -0.77
CX3CL1-201ENST00000006053 GPR153Q6NV75 609 aa10.23□□□□□ -0.77
CX3CL1-201ENST00000006053 LINC00299Q6ZSB3 139 aa10.23□□□□□ -0.77
CX3CL1-201ENST00000006053 AKAP14Q86UN6 197 aa10.23□□□□□ -0.77
CX3CL1-201ENST00000006053 LYSMD2Q8IV50 215 aa10.23□□□□□ -0.77
CX3CL1-201ENST00000006053 DEPDC4Q8N2C3 294 aa10.23□□□□□ -0.77
CX3CL1-201ENST00000006053 FAM83FQ8NEG4 500 aaPredicted RBP10.23□□□□□ -0.77
CX3CL1-201ENST00000006053 ELMO1Q92556 727 aa10.23□□□□□ -0.77
CX3CL1-201ENST00000006053 PROX1Q92786 737 aa10.23□□□□□ -0.77
CX3CL1-201ENST00000006053 EID2BQ96D98 161 aa10.23□□□□□ -0.77
CX3CL1-201ENST00000006053 PDLIM5Q96HC4 596 aaKnown RBP10.23□□□□□ -0.77
CX3CL1-201ENST00000006053 FAM193BQ96PV7 902 aaPredicted RBP10.23□□□□□ -0.77
CX3CL1-201ENST00000006053 DPH2Q9BQC3 489 aaPredicted RBP10.23□□□□□ -0.77
CX3CL1-201ENST00000006053 TM9SF3Q9HD45 589 aa10.23□□□□□ -0.77
CX3CL1-201ENST00000006053 CCNB1IP1Q9NPC3 277 aa10.23□□□□□ -0.77
CX3CL1-201ENST00000006053 IL17CQ9P0M4 197 aa10.23□□□□□ -0.77
CX3CL1-201ENST00000006053 ZNF451Q9Y4E5 1061 aa10.23□□□□□ -0.77
CX3CL1-201ENST00000006053 OARD1Q9Y530 152 aa10.23□□□□□ -0.77
CX3CL1-201ENST00000006053 GBF1Q92538 1859 aa10.23□□□□□ -0.77
CX3CL1-201ENST00000006053 WNT9AO14904 365 aa10.22□□□□□ -0.77
CX3CL1-201ENST00000006053 PCDHGA12O60330 932 aa10.22□□□□□ -0.77
CX3CL1-201ENST00000006053 CCNDBP1O95273 360 aa10.22□□□□□ -0.77
CX3CL1-201ENST00000006053 CPSF4O95639 269 aaKnown RBP10.22□□□□□ -0.77
CX3CL1-201ENST00000006053 KRT6AP02538 564 aa10.22□□□□□ -0.77
CX3CL1-201ENST00000006053 KRT6BP04259 564 aa10.22□□□□□ -0.77
CX3CL1-201ENST00000006053 BMP1P13497 986 aa10.22□□□□□ -0.77
CX3CL1-201ENST00000006053 ALOX12P18054 663 aa10.22□□□□□ -0.77
CX3CL1-201ENST00000006053 FPR1P21462 350 aa10.22□□□□□ -0.77
CX3CL1-201ENST00000006053 DGKAP23743 735 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms