RNA–Protein interactions for RNA: ENSMUST00000098548.7

Scn1b-201, Transcript of Sodium channel subunit beta-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Scn1b, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1b-201ENSMUST00000098548 Trim8Q99PJ2 551 aa22■■□□□ 1.11
Scn1b-201ENSMUST00000098548 Ift43Q9DA69 206 aa22■■□□□ 1.11
Scn1b-201ENSMUST00000098548 Tssc4Q9JHE7 317 aa22■■□□□ 1.11
Scn1b-201ENSMUST00000098548 Dmxl1Q6PNC0 3013 aa22■■□□□ 1.11
Scn1b-201ENSMUST00000098548 Unc13cQ8K0T7 2210 aa22■■□□□ 1.11
Scn1b-201ENSMUST00000098548 Gm43518A0A0G2JGB6 165 aa21.99■■□□□ 1.11
Scn1b-201ENSMUST00000098548 Ssc4dA1L0T3 586 aa21.99■■□□□ 1.11
Scn1b-201ENSMUST00000098548 Gm4871D3Z0W7 314 aa21.99■■□□□ 1.11
Scn1b-201ENSMUST00000098548 Galnt9G3X942 604 aa21.99■■□□□ 1.11
Scn1b-201ENSMUST00000098548 Zfp607bG3X9H3 648 aa21.99■■□□□ 1.11
Scn1b-201ENSMUST00000098548 Dnajb5O89114 348 aa21.99■■□□□ 1.11
Scn1b-201ENSMUST00000098548 Anxa6P14824 673 aaKnown RBP21.99■■□□□ 1.11
Scn1b-201ENSMUST00000098548 CratP47934 626 aa21.99■■□□□ 1.11
Scn1b-201ENSMUST00000098548 Fam105aQ3TVP5 353 aa21.99■■□□□ 1.11
Scn1b-201ENSMUST00000098548 Zfyve27Q3TXX3 415 aa21.99■■□□□ 1.11
Scn1b-201ENSMUST00000098548 Spata6Q3U6K5 488 aa21.99■■□□□ 1.11
Scn1b-201ENSMUST00000098548 Grb10Q60760 621 aa21.99■■□□□ 1.11
Scn1b-201ENSMUST00000098548 Svs1Q6WIZ7 820 aa21.99■■□□□ 1.11
Scn1b-201ENSMUST00000098548 Actr5Q80US4 605 aaKnown RBP21.99■■□□□ 1.11
Scn1b-201ENSMUST00000098548 Ap5m1Q8BJ63 490 aa21.99■■□□□ 1.11
Scn1b-201ENSMUST00000098548 Galnt13Q8CF93 556 aa21.99■■□□□ 1.11
Scn1b-201ENSMUST00000098548 Lin7aQ8JZS0 233 aa21.99■■□□□ 1.11
Scn1b-201ENSMUST00000098548 Cdc16Q8R349 620 aa21.99■■□□□ 1.11
Scn1b-201ENSMUST00000098548 Klhl28Q9CR40 571 aa21.99■■□□□ 1.11
Scn1b-201ENSMUST00000098548 3300002I08RikQ9CXH3 147 aa21.99■■□□□ 1.11
Scn1b-201ENSMUST00000098548 Ogfod3Q9D136 315 aa21.99■■□□□ 1.11
Scn1b-201ENSMUST00000098548 Gid8Q9D7M1 228 aa21.99■■□□□ 1.11
Scn1b-201ENSMUST00000098548 Rhobtb1Q9DAK3 695 aa21.99■■□□□ 1.11
Scn1b-201ENSMUST00000098548 MipepA6H611 711 aa21.99■■□□□ 1.11
Scn1b-201ENSMUST00000098548 Sec14l5B2RXM5 696 aa21.99■■□□□ 1.11
Scn1b-201ENSMUST00000098548 Olfr319L7MTY4 306 aa21.99■■□□□ 1.11
Scn1b-201ENSMUST00000098548 Bard1O70445 765 aa21.99■■□□□ 1.11
Scn1b-201ENSMUST00000098548 MaxP28574 160 aa21.99■■□□□ 1.11
Scn1b-201ENSMUST00000098548 NficP70255 439 aa21.99■■□□□ 1.11
Scn1b-201ENSMUST00000098548 Tbx4P70325 552 aa21.99■■□□□ 1.11
Scn1b-201ENSMUST00000098548 TgfbiP82198 683 aa21.99■■□□□ 1.11
Scn1b-201ENSMUST00000098548 XpaQ64267 272 aa21.99■■□□□ 1.11
Scn1b-201ENSMUST00000098548 Larp4bQ6A0A2 741 aaKnown RBP21.99■■□□□ 1.11
Scn1b-201ENSMUST00000098548 Cd99l2Q8BIF0 237 aa21.99■■□□□ 1.11
Scn1b-201ENSMUST00000098548 Vmn1r87Q8R255 295 aa21.99■■□□□ 1.11
Scn1b-201ENSMUST00000098548 Clptm1Q8VBZ3 664 aa21.99■■□□□ 1.11
Scn1b-201ENSMUST00000098548 Uts2rQ8VIH9 385 aa21.99■■□□□ 1.11
Scn1b-201ENSMUST00000098548 Pdk3Q922H2 415 aaKnown RBP21.99■■□□□ 1.11
Scn1b-201ENSMUST00000098548 Def8Q99J78 448 aa21.99■■□□□ 1.11
Scn1b-201ENSMUST00000098548 Mtfr1Q99MB2 328 aa21.99■■□□□ 1.11
Scn1b-201ENSMUST00000098548 Sp2Q9D2H6 612 aa21.99■■□□□ 1.11
Scn1b-201ENSMUST00000098548 Gsdmdc1Q9D8T2 487 aa21.99■■□□□ 1.11
Scn1b-201ENSMUST00000098548 Cd302Q9DCG2 228 aa21.99■■□□□ 1.11
Scn1b-201ENSMUST00000098548 Chrnb2Q9ERK7 501 aa21.99■■□□□ 1.11
Scn1b-201ENSMUST00000098548 HemgnQ9ERZ0 503 aa21.99■■□□□ 1.11
Scn1b-201ENSMUST00000098548 Il22bQ9JJY8 179 aa21.99■■□□□ 1.11
Scn1b-201ENSMUST00000098548 Csnk1eQ9JMK2 416 aaKnown RBP21.99■■□□□ 1.11
Scn1b-201ENSMUST00000098548 Nme4Q9WV84 186 aa21.99■■□□□ 1.11
Scn1b-201ENSMUST00000098548 Tex13c2A0A0G2JGA3 530 aa21.98■■□□□ 1.11
Scn1b-201ENSMUST00000098548 Vmn1r3A2AMT7 306 aa21.98■■□□□ 1.11
Scn1b-201ENSMUST00000098548 Lgr4A2ARI4 951 aa21.98■■□□□ 1.11
Scn1b-201ENSMUST00000098548 Rnf39A2RT81 352 aa21.98■■□□□ 1.11
Scn1b-201ENSMUST00000098548 1600015I10RikE9Q745 711 aa21.98■■□□□ 1.11
Scn1b-201ENSMUST00000098548 MrasO08989 208 aa21.98■■□□□ 1.11
Scn1b-201ENSMUST00000098548 InvsO89019 1062 aa21.98■■□□□ 1.11
Scn1b-201ENSMUST00000098548 RapsnP12672 412 aa21.98■■□□□ 1.11
Scn1b-201ENSMUST00000098548 Tcea3P23881 347 aaKnown RBP21.98■■□□□ 1.11
Scn1b-201ENSMUST00000098548 Ly6fP35460 134 aa21.98■■□□□ 1.11
Scn1b-201ENSMUST00000098548 HalP35492 657 aa21.98■■□□□ 1.11
Scn1b-201ENSMUST00000098548 Sf1Q64213 653 aaKnown RBP21.98■■□□□ 1.11
Scn1b-201ENSMUST00000098548 Ubfd1Q78JW9 368 aa21.98■■□□□ 1.11
Scn1b-201ENSMUST00000098548 Olfr1197Q7TR13 314 aa21.98■■□□□ 1.11
Scn1b-201ENSMUST00000098548 Olfr1196Q7TR14 314 aa21.98■■□□□ 1.11
Scn1b-201ENSMUST00000098548 Ap4e1Q80V94 1122 aa21.98■■□□□ 1.11
Scn1b-201ENSMUST00000098548 Rdh13Q8CEE7 334 aa21.98■■□□□ 1.11
Scn1b-201ENSMUST00000098548 Samd14Q8K070 417 aa21.98■■□□□ 1.11
Scn1b-201ENSMUST00000098548 Nfatc4Q8K120 901 aa21.98■■□□□ 1.11
Scn1b-201ENSMUST00000098548 Zcchc9Q8R1J3 271 aaKnown RBP21.98■■□□□ 1.11
Scn1b-201ENSMUST00000098548 Vmn1r79Q8R285 306 aa21.98■■□□□ 1.11
Scn1b-201ENSMUST00000098548 Olfr183Q8VFB9 309 aa21.98■■□□□ 1.11
Scn1b-201ENSMUST00000098548 Fam69bQ99ML4 431 aa21.98■■□□□ 1.11
Scn1b-201ENSMUST00000098548 Wdr45bQ9CR39 344 aa21.98■■□□□ 1.11
Scn1b-201ENSMUST00000098548 Psmd8Q9CX56 353 aa21.98■■□□□ 1.11
Scn1b-201ENSMUST00000098548 Cyp2u1Q9CX98 530 aa21.98■■□□□ 1.11
Scn1b-201ENSMUST00000098548 PigkQ9CXY9 395 aa21.98■■□□□ 1.11
Scn1b-201ENSMUST00000098548 Uba7Q9DBK7 977 aa21.98■■□□□ 1.11
Scn1b-201ENSMUST00000098548 Ror2Q9Z138 944 aa21.98■■□□□ 1.11
Scn1b-201ENSMUST00000098548 Gm45233A0A0N4SVE0 221 aa21.97■■□□□ 1.11
Scn1b-201ENSMUST00000098548 A0A286YDP4 300 aa21.97■■□□□ 1.11
Scn1b-201ENSMUST00000098548 Trgv2A2J008 116 aa21.97■■□□□ 1.11
Scn1b-201ENSMUST00000098548 Rnf169E9Q7F2 694 aa21.97■■□□□ 1.11
Scn1b-201ENSMUST00000098548 Ptar1E9QAB6 424 aa21.97■■□□□ 1.11
Scn1b-201ENSMUST00000098548 LatO54957 242 aa21.97■■□□□ 1.11
Scn1b-201ENSMUST00000098548 Grpel2O88396 224 aa21.97■■□□□ 1.11
Scn1b-201ENSMUST00000098548 LtfP08071 707 aa21.97■■□□□ 1.11
Scn1b-201ENSMUST00000098548 F2P19221 618 aa21.97■■□□□ 1.11
Scn1b-201ENSMUST00000098548 Rack1P68040 317 aaKnown RBP21.97■■□□□ 1.11
Scn1b-201ENSMUST00000098548 Bop1P97452 732 aaKnown RBP21.97■■□□□ 1.11
Scn1b-201ENSMUST00000098548 Emx2Q04744 253 aa21.97■■□□□ 1.11
Scn1b-201ENSMUST00000098548 Defb28Q3V2L0 89 aa21.97■■□□□ 1.11
Scn1b-201ENSMUST00000098548 Pacs2Q3V3Q7 862 aa21.97■■□□□ 1.11
Scn1b-201ENSMUST00000098548 Sh3gl3Q62421 347 aa21.97■■□□□ 1.11
Scn1b-201ENSMUST00000098548 Rtp2Q80ZI2 223 aa21.97■■□□□ 1.11
Scn1b-201ENSMUST00000098548 Slc24a5Q8C261 501 aa21.97■■□□□ 1.11
Scn1b-201ENSMUST00000098548 Vps37aQ8CHS8 397 aa21.97■■□□□ 1.11
Retrieved 100 of 22,080 RNA–protein pairs in 28.5 ms