RNA–Protein interactions for RNA: ENSMUST00000092215.5

Ccdc38-201, Transcript of Coiled-coil domain-containing protein 38, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc38, Length 3,656 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38-201ENSMUST00000092215 Trmt1lA2RSY6 728 aaKnown RBP9.63□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 Apba1B2RUJ5 842 aa9.63□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 FgaE9PV24 789 aa9.63□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 Zscan4bE9Q3G0 505 aa9.63□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 Atn1O35126 1175 aa9.63□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 Apoa4P06728 395 aa9.63□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 Clec4a4Q5YIR8 236 aa9.63□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 Sohlh1Q6IUP1 357 aa9.63□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 Trim50Q810I2 483 aa9.63□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 Zhx3Q8C0Q2 951 aa9.63□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 Sh3glb2Q8R3V5 400 aa9.63□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 DgkgQ91WG7 788 aa9.63□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 PompQ9CQT5 141 aa9.63□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 Slc13a1Q9JHI4 594 aa9.63□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 FarsbQ9WUA2 589 aaKnown RBP9.63□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 Gm6509A0A0J9YUV1 481 aa9.62□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 Vmn2r-ps130A0A140T8U3 855 aa9.62□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 Gm14401A2ARV7 303 aa9.62□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 Vmn2r96E9PZU5 664 aa9.62□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 Gm6351K9J7D1 481 aa9.62□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 Zic1P46684 447 aa9.62□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 Ak8Q32M07 479 aa9.62□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 Timm8a2Q4FZG7 97 aa9.62□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 MybphlQ5FW53 355 aa9.62□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 Map3k3Q61084 626 aa9.62□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 Txndc15Q6P6J9 344 aa9.62□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 Uts2bQ765I1 113 aa9.62□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 Prr14Q7TPN9 612 aa9.62□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 Olfr1037Q7TR84 321 aa9.62□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 Tmem198Q8BG75 360 aa9.62□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 Stk32aQ8BGW6 398 aa9.62□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 Fbxo30Q8BJL1 746 aa9.62□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 Q8BWQ6 963 aa9.62□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 Casp9Q8C3Q9 454 aa9.62□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 Slc29a4Q8R139 528 aa9.62□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 Pycr1Q922W5 309 aa9.62□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 Poc5Q9DBS8 558 aa9.62□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 Olig2Q9EQW6 323 aa9.62□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 Tor1bQ9ER41 336 aa9.62□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 Gkap1Q9JMB0 366 aa9.62□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 Xkr6E9Q6C8 638 aa9.62□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 Spdye4cI6XKQ3 339 aa9.62□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 Eno2P17183 434 aa9.62□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 Esr1P19785 599 aa9.62□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 BckdhaP50136 442 aa9.62□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 HnrnpkP61979 463 aaKnown RBP9.62□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 Rps17P63276 135 aaKnown RBP9.62□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 ElocP83940 112 aaKnown RBP9.62□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 Cpt1aP97742 773 aa9.62□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 Polr2cP97760 275 aa9.62□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 Rcn1Q05186 325 aa9.62□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 UnklQ5FWH2 727 aaKnown RBP9.62□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 Rbm45Q8BHN5 476 aaKnown RBP9.62□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 Arrb1Q8BWG8 418 aa9.62□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 Rbmx2Q8R0F5 326 aaKnown RBP9.62□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 Tmem150bQ8R218 238 aa9.62□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 Q99KU6 348 aa9.62□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 Exosc7Q9D0M0 291 aaKnown RBP9.62□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 Rai2Q9QVY8 529 aa9.62□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 Katna1Q9WV86 491 aa9.62□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 Dmxl1Q6PNC0 3013 aa9.62□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 Gm3952A0A0A6YXJ1 191 aa9.62□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 Cylc1A0A1B0GR13 642 aa9.62□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 Wfdc11A2A5H7 82 aa9.62□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 Fam217bA2AJW5 387 aa9.62□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 UprtB1AVZ0 310 aa9.62□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 RfngO09009 332 aa9.62□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 Tbxa2rP30987 341 aa9.62□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 Rab23P35288 237 aa9.62□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 Tac1P41539 130 aa9.62□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 PdprQ7TSQ8 878 aa9.62□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 PeloQ80X73 385 aa9.62□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 Znf879Q8BI99 563 aa9.62□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 Cox15Q8BJ03 413 aa9.62□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 Lats1Q8BYR2 1129 aa9.62□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 Wdr60Q8C761 999 aa9.62□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 Nudt13Q8JZU0 352 aa9.62□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 Abcf3Q8K268 709 aa9.62□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 Olfr53Q8VGL8 312 aa9.62□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 Olfr659Q8VGV6 322 aa9.62□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 Cdkal1Q91WE6 578 aa9.62□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 Pdia5Q921X9 517 aa9.62□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 Mtfr1Q99MB2 328 aa9.62□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 PclafQ9CQX4 110 aaKnown RBP9.62□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 Rsph9Q9D9V4 276 aa9.62□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 CdylQ9WTK2 593 aa9.62□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 Mtx3D3YTP3 312 aa9.61□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 Zfp839E9PUU5 921 aa9.61□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 P04213 122 aa9.61□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 Prss48Q14B25 312 aa9.61□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 Sec31bQ3TZ89 1158 aa9.61□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 Nt5c3bQ3UFY7 300 aa9.61□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 Axdnd1Q3UZ57 424 aa9.61□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 Zfp280bQ505F4 534 aa9.61□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 Coq4Q8BGB8 266 aa9.61□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 Ccdc186Q8C9S4 917 aa9.61□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 Olfr1310Q8VF85 312 aa9.61□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 Mrm1Q99J25 320 aa9.61□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 Zdhhc6Q9CPV7 413 aa9.61□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 Klhl28Q9CR40 571 aa9.61□□□□□ -0.87
Retrieved 100 of 22,080 RNA–protein pairs in 43.5 ms