RNA–Protein interactions for RNA: ENSMUST00000028728.5

Ubr1-201, Transcript of E3 ubiquitin-protein ligase UBR1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubr1, Length 7,768 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1-201ENSMUST00000028728 Pik3c2bE9QAN8 1632 aa9.93□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Smurf2A2A5Z6 748 aa9.93□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Apba2P98084 750 aa9.93□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Gpr174Q3U507 335 aa9.93□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Arhgef15Q5FWH6 849 aa9.93□□□□□ -0.82
Ubr1-201ENSMUST00000028728 MslnQ61468 625 aa9.93□□□□□ -0.82
Ubr1-201ENSMUST00000028728 SowahaQ8BLS7 548 aa9.93□□□□□ -0.82
Ubr1-201ENSMUST00000028728 PpcdcQ8BZB2 204 aa9.93□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Cstf2tQ8C7E9 632 aaKnown RBP9.93□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Fam136aQ9CR98 138 aa9.93□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Dpysl5Q9EQF6 564 aa9.93□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Klhdc7bA0A286YD60 1263 aa9.93□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Mgl2A9XX86 381 aa9.93□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Calhm3J3QMI4 347 aa9.93□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Vmn2r61L7N2B8 865 aa9.93□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Chsy3Q5DTK1 884 aa9.93□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Rasgrp3Q6NZH9 691 aa9.93□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Fbxl21Q8BFZ4 434 aa9.93□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Hspbap1Q8BK58 483 aa9.93□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Bbs4Q8C1Z7 520 aa9.93□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Uroc1Q8VC12 676 aa9.93□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Uchl1Q9R0P9 223 aa9.93□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Trpm3Q5F4S9 1721 aa9.93□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Spats1A2RRY8 269 aa9.93□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Zfp282E9PVC2 666 aa9.93□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Zfp384E9Q1A5 584 aaKnown RBP9.93□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Galnt1O08912 559 aaKnown RBP9.93□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Npc1O35604 1277 aa9.93□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Scamp3O35609 349 aa9.93□□□□□ -0.82
Ubr1-201ENSMUST00000028728 LipcP27656 510 aa9.93□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Rpl6P47911 296 aaKnown RBP9.93□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Svs6Q64356 99 aa9.93□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Tas2r3Q7TQA7 316 aa9.93□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Arl15Q8BGR6 204 aa9.93□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Dlgap5Q8K4R9 808 aa9.93□□□□□ -0.82
Ubr1-201ENSMUST00000028728 ItpkaQ8R071 459 aa9.93□□□□□ -0.82
Ubr1-201ENSMUST00000028728 OscarQ8VBT3 265 aa9.93□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Olfr356Q8VFP5 315 aa9.93□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Memo1Q91VH6 297 aa9.93□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Klk6Q91Y82 253 aa9.93□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Rcbtb2Q99LJ7 551 aa9.93□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Cdh17Q9R100 827 aa9.93□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Trdmt1O55055 415 aa9.93□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Ubl4aP21126 157 aaKnown RBP9.93□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Wnt10bP48614 389 aa9.93□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Ap1s1P61967 158 aa9.93□□□□□ -0.82
Ubr1-201ENSMUST00000028728 SmsP97355 366 aa9.93□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Ankdd1bQ14DN9 521 aa9.93□□□□□ -0.82
Ubr1-201ENSMUST00000028728 LchnQ3UHG7 455 aa9.93□□□□□ -0.82
Ubr1-201ENSMUST00000028728 1810065E05RikQ5NC41 235 aa9.93□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Olfr463Q5SW49 311 aa9.93□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Olfr462Q5SW50 311 aa9.93□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Foxd1Q61345 456 aa9.93□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Lrrn1Q61809 716 aa9.93□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Fgfr3Q61851 801 aa9.93□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Zfp606Q7TSV0 794 aa9.93□□□□□ -0.82
Ubr1-201ENSMUST00000028728 AardQ811W1 167 aa9.93□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Gk5Q8BX05 534 aa9.93□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Slc22a12Q8CFZ5 553 aa9.93□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Usb1Q91W78 267 aa9.93□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Mfsd10Q9D2V8 456 aaKnown RBP9.93□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Slc5a3Q9JKZ2 718 aa9.93□□□□□ -0.82
Ubr1-201ENSMUST00000028728 C5P06684 1680 aa9.93□□□□□ -0.82
Ubr1-201ENSMUST00000028728 IqccA2ADZ8 418 aa9.93□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Gm595A2AF73 655 aa9.93□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Galntl6E5D8G1 601 aa9.93□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Gm6460F6YJZ8 199 aa9.93□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Cyp2j8G3UZ38 503 aa9.93□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Gm6803J3QPI8 144 aa9.93□□□□□ -0.82
Ubr1-201ENSMUST00000028728 TrhrP21761 393 aa9.93□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Lingo2Q3URE9 606 aa9.93□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Zc3h11aQ6NZF1 792 aaKnown RBP9.93□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Snx6Q6P8X1 406 aa9.93□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Klhl24Q8BRG6 600 aa9.93□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Sec22cQ8BXT9 303 aa9.93□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Vmn1r205Q8R276 316 aa9.93□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Ptgr2Q8VDQ1 351 aa9.93□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Slc43a3A2AVZ9 502 aa9.93□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Kctd17E0CYQ0 296 aa9.93□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Gm11397F6V5V4 377 aa9.93□□□□□ -0.82
Ubr1-201ENSMUST00000028728 KeraO35367 351 aa9.93□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Btg3P50615 252 aa9.93□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Ufm1P61961 85 aa9.93□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Prl3a1Q78Y73 227 aa9.93□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Sra1Q80VJ2 232 aa9.93□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Spon2Q8BMS2 330 aa9.93□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Steap2Q8BWB6 489 aa9.93□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Utp15Q8C7V3 528 aaKnown RBP9.93□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Cnppd1Q8K158 407 aa9.93□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Cdkal1Q91WE6 578 aa9.93□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Tpra1Q99MU1 369 aa9.93□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Uck2Q99PM9 261 aa9.93□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Nudt8Q9CR24 210 aa9.93□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Tmem174Q9DCX7 243 aa9.93□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Slco1c1Q9ERB5 715 aa9.93□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Chrna6Q9R0W9 494 aa9.93□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Wdr95D3Z7A8 784 aa9.92□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Per3O70361 1113 aa9.92□□□□□ -0.82
Ubr1-201ENSMUST00000028728 CcnfP51944 777 aa9.92□□□□□ -0.82
Ubr1-201ENSMUST00000028728 VegfaQ00731 214 aa9.92□□□□□ -0.82
Retrieved 100 of 22,080 RNA–protein pairs in 24 ms