RNA–Protein interactions for RNA: ENSMUST00000028280.13

Col5a1-201, Transcript of Collagen alpha-1(V) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col5a1, Length 8,406 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1-201ENSMUST00000028280 Rasa4Q6PFQ7 802 aa13.68□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Tmem164Q6PHN7 296 aa13.68□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Q8WUR0 141 aa13.68□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Arpc2Q9CVB6 300 aa13.68□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Zdhhc21Q9D270 265 aa13.68□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Gm4302E9PX25 294 aa13.68□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Gria2P23819 883 aa13.68□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Spata7Q80VP2 582 aa13.68□□□□□ -0.22
Col5a1-201ENSMUST00000028280 AasdhQ80WC9 1100 aa13.68□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Clrn1Q8K445 232 aa13.68□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Cmss1Q9CZT6 276 aaKnown RBP13.68□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Grm3Q9QYS2 879 aa13.68□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Fam171a2A2A699 822 aa13.68□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Sult2a6B2RVI8 285 aa13.68□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Gm6685D3YYP3 228 aa13.68□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Rpl7aP12970 266 aaKnown RBP13.68□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Tulp2P46686 562 aa13.68□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Irf3P70671 419 aa13.68□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Gm732Q3V0P9 516 aa13.68□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Txnl4bQ8BUH1 149 aa13.68□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Lrrc42Q8R2U7 421 aa13.68□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Yipf7Q9JIM5 254 aa13.68□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Gm3072F6SKY8 209 aa13.67□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Gm17654F7AXR3 209 aa13.67□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Atp5jP97450 108 aa13.67□□□□□ -0.22
Col5a1-201ENSMUST00000028280 1810049J17RikQ3V2G9 153 aa13.67□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Olfr1355Q7TQU9 310 aa13.67□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Kctd7Q8BJK1 289 aa13.67□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Rbm18Q9CR83 190 aa13.67□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Nmrk2Q9D7C9 195 aa13.67□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Prorsd1Q9D820 169 aa13.67□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Chst7Q9EP78 484 aa13.67□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Ms4a4bQ9ES61 226 aa13.67□□□□□ -0.22
Col5a1-201ENSMUST00000028280 SvilQ8K4L3 2170 aa13.67□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Nwd1A6H603 1563 aa13.67□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Cntnap3E9PY62 1287 aa13.67□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Bmp4P21275 408 aa13.67□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Adamts15P59384 950 aa13.67□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Sema4bQ62179 823 aa13.67□□□□□ -0.22
Col5a1-201ENSMUST00000028280 FgbQ8K0E8 481 aa13.67□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Gemin2Q9CQQ4 269 aa13.67□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Ssu72Q9CY97 194 aaKnown RBP13.67□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Vmn2r93L7N1Z9 857 aa13.67□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Matn2O08746 956 aa13.67□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Tnfsf4P43488 198 aa13.67□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Plk2P53351 682 aa13.67□□□□□ -0.22
Col5a1-201ENSMUST00000028280 4933415F23RikQ14BX6 153 aa13.67□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Ei24Q61070 340 aa13.67□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Arl5cQ6P068 179 aa13.67□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Psmf1Q8BHL8 271 aa13.67□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Olfr1395Q8VGD7 317 aa13.67□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Pcdhga11Q91XY8 933 aa13.67□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Olfr955Q9EQ97 314 aa13.67□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Neurod4O09105 330 aa13.67□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Fkbp7O54998 218 aa13.67□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Znf143O70230 638 aa13.67□□□□□ -0.22
Col5a1-201ENSMUST00000028280 PepdQ11136 493 aa13.67□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Snrnp70Q62376 448 aaKnown RBP13.67□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Epha10Q8BYG9 1007 aa13.67□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Zfp446Q8C9M8 523 aa13.67□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Micu2Q8CD10 432 aa13.67□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Celf3Q8CIN6 465 aa13.67□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Dnase1l2Q9D1G0 278 aa13.67□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Dpysl5Q9EQF6 564 aa13.67□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Rdh11Q9QYF1 316 aa13.67□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Tcea1P10711 301 aaKnown RBP13.67□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Bmp6P20722 510 aa13.67□□□□□ -0.22
Col5a1-201ENSMUST00000028280 DckP43346 260 aa13.67□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Cmklr1P97468 371 aa13.67□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Sox8Q04886 464 aa13.67□□□□□ -0.22
Col5a1-201ENSMUST00000028280 R3hdm4Q4VBF2 262 aa13.67□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Olfr1385Q7TQT1 309 aa13.67□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Wscd1Q80XH4 572 aa13.67□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Q810N5 247 aa13.67□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Orai2Q8BH10 250 aa13.67□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Rtp1Q8C8C1 263 aa13.67□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Fam161aQ8QZV6 448 aa13.67□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Slc51aQ8R000 340 aa13.67□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Mtif3Q9CZD5 276 aa13.67□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Nhsl2B1AXH1 854 aa13.67□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Grap2O89100 322 aa13.67□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Etv6P97360 485 aa13.67□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Snx33Q4VAA7 574 aa13.67□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Tspan18Q80WR1 248 aa13.67□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Aifm2Q8BUE4 373 aa13.67□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Csnka2ipQ8CH19 720 aa13.67□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Slc38a4Q8R1S9 547 aa13.67□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Mrps33Q9D2R8 106 aa13.67□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Cited4Q9WUL8 182 aa13.67□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Tcf7l1Q9Z1J1 584 aa13.67□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Olfr1366A0A1W2P740 328 aa13.67□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Olfr1564K7N6V7 318 aa13.67□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Dnaja1P63037 397 aaKnown RBP13.67□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Serpinb9dQ8BMT0 377 aa13.67□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Fam173bQ9D1Z3 247 aa13.67□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Zfp871G5E905 615 aa13.66□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Cyp4a14O35728 507 aa13.66□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Sult4a1P63046 284 aa13.66□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Adam5Q3TTE0 751 aa13.66□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Mtmr11Q3V1L6 700 aa13.66□□□□□ -0.22
Retrieved 100 of 22,080 RNA–protein pairs in 34.9 ms