RNA–Protein interactions for RNA: ENSMUST00000005841.15

Ctcf-201, Transcript of Transcriptional repressor CTCF, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctcf, Length 3,782 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctcf-201ENSMUST00000005841 Snx25Q3ZT31 840 aa16.43■□□□□ 0.22
Ctcf-201ENSMUST00000005841 Dlgap3Q6PFD5 977 aa16.43■□□□□ 0.22
Ctcf-201ENSMUST00000005841 Atg10Q8R1P4 215 aa16.43■□□□□ 0.22
Ctcf-201ENSMUST00000005841 Ero1bQ8R2E9 467 aa16.43■□□□□ 0.22
Ctcf-201ENSMUST00000005841 Rbm12Q8R4X3 992 aaKnown RBP16.43■□□□□ 0.22
Ctcf-201ENSMUST00000005841 Olfr437Q8VEV1 310 aa16.43■□□□□ 0.22
Ctcf-201ENSMUST00000005841 Dusp7Q91Z46 422 aa16.43■□□□□ 0.22
Ctcf-201ENSMUST00000005841 5430402E10RikQ9D3N5 173 aa16.43■□□□□ 0.22
Ctcf-201ENSMUST00000005841 Gm6592A2AHC7 168 aa16.43■□□□□ 0.22
Ctcf-201ENSMUST00000005841 Aldoart1A6ZI46 419 aa16.43■□□□□ 0.22
Ctcf-201ENSMUST00000005841 Calhm3J3QMI4 347 aa16.43■□□□□ 0.22
Ctcf-201ENSMUST00000005841 Lsm2O35900 95 aaKnown RBP16.43■□□□□ 0.22
Ctcf-201ENSMUST00000005841 Q3UST5 385 aa16.43■□□□□ 0.22
Ctcf-201ENSMUST00000005841 Ubtfl1Q3USZ2 394 aa16.43■□□□□ 0.22
Ctcf-201ENSMUST00000005841 Etaa1Q5SVT3 877 aa16.43■□□□□ 0.22
Ctcf-201ENSMUST00000005841 Zfp943Q6NZP4 507 aa16.43■□□□□ 0.22
Ctcf-201ENSMUST00000005841 Znf516Q7TSH3 1157 aa16.43■□□□□ 0.22
Ctcf-201ENSMUST00000005841 Pnma8aQ80VM8 430 aa16.43■□□□□ 0.22
Ctcf-201ENSMUST00000005841 Hmgxb4Q80Y32 594 aaKnown RBP16.43■□□□□ 0.22
Ctcf-201ENSMUST00000005841 Lrrtm2Q8BGA3 515 aa16.43■□□□□ 0.22
Ctcf-201ENSMUST00000005841 Ctdsp2Q8BX07 270 aa16.43■□□□□ 0.22
Ctcf-201ENSMUST00000005841 HopxQ8R1H0 73 aa16.43■□□□□ 0.22
Ctcf-201ENSMUST00000005841 Tctn3Q8R2Q6 595 aa16.43■□□□□ 0.22
Ctcf-201ENSMUST00000005841 AspaQ8R3P0 312 aa16.43■□□□□ 0.22
Ctcf-201ENSMUST00000005841 Hip1Q8VD75 1029 aaKnown RBP16.43■□□□□ 0.22
Ctcf-201ENSMUST00000005841 Glyr1Q922P9 546 aaKnown RBP16.43■□□□□ 0.22
Ctcf-201ENSMUST00000005841 Baz2aQ91YE5 1889 aaKnown RBP16.43■□□□□ 0.22
Ctcf-201ENSMUST00000005841 Gm21800J3QMJ9 180 aa16.42■□□□□ 0.22
Ctcf-201ENSMUST00000005841 Sdc4O35988 198 aaKnown RBP16.42■□□□□ 0.22
Ctcf-201ENSMUST00000005841 IduaP48441 634 aa16.42■□□□□ 0.22
Ctcf-201ENSMUST00000005841 Cab39Q06138 341 aa16.42■□□□□ 0.22
Ctcf-201ENSMUST00000005841 Q3UK37 420 aa16.42■□□□□ 0.22
Ctcf-201ENSMUST00000005841 Krt76Q3UV17 594 aaKnown RBP16.42■□□□□ 0.22
Ctcf-201ENSMUST00000005841 Gm10392Q3V3I3 114 aa16.42■□□□□ 0.22
Ctcf-201ENSMUST00000005841 Kpna1Q60960 538 aa16.42■□□□□ 0.22
Ctcf-201ENSMUST00000005841 Cfap20Q8BTU1 193 aa16.42■□□□□ 0.22
Ctcf-201ENSMUST00000005841 Zbtb37Q8C3U9 504 aa16.42■□□□□ 0.22
Ctcf-201ENSMUST00000005841 March2Q99M02 246 aa16.42■□□□□ 0.22
Ctcf-201ENSMUST00000005841 Nmnat1Q9EPA7 285 aa16.42■□□□□ 0.22
Ctcf-201ENSMUST00000005841 Skint2A7XUX6 400 aa16.42■□□□□ 0.22
Ctcf-201ENSMUST00000005841 Prss53Q571E5 552 aa16.42■□□□□ 0.22
Ctcf-201ENSMUST00000005841 Slc30a1Q60738 503 aa16.42■□□□□ 0.22
Ctcf-201ENSMUST00000005841 Stard3Q61542 446 aa16.42■□□□□ 0.22
Ctcf-201ENSMUST00000005841 Gja6Q6S5G4 283 aa16.42■□□□□ 0.22
Ctcf-201ENSMUST00000005841 Rdh10Q8VCH7 341 aa16.42■□□□□ 0.22
Ctcf-201ENSMUST00000005841 Olfr273Q8VG87 317 aa16.42■□□□□ 0.22
Ctcf-201ENSMUST00000005841 EsamQ925F2 394 aa16.42■□□□□ 0.22
Ctcf-201ENSMUST00000005841 TriobpQ99KW3 2014 aa16.42■□□□□ 0.22
Ctcf-201ENSMUST00000005841 Tmem179bQ9CY24 219 aa16.42■□□□□ 0.22
Ctcf-201ENSMUST00000005841 Rhobtb1Q9DAK3 695 aa16.42■□□□□ 0.22
Ctcf-201ENSMUST00000005841 Cd93O89103 644 aa16.42■□□□□ 0.22
Ctcf-201ENSMUST00000005841 P01679 107 aa16.42■□□□□ 0.22
Ctcf-201ENSMUST00000005841 ArntP53762 791 aa16.42■□□□□ 0.22
Ctcf-201ENSMUST00000005841 Cdh9P70407 786 aa16.42■□□□□ 0.22
Ctcf-201ENSMUST00000005841 Nutm2Q3V0C3 733 aa16.42■□□□□ 0.22
Ctcf-201ENSMUST00000005841 Clec9aQ8BRU4 238 aa16.42■□□□□ 0.22
Ctcf-201ENSMUST00000005841 Larp4Q8BWW4 719 aaKnown RBP16.42■□□□□ 0.22
Ctcf-201ENSMUST00000005841 N4bp2l2Q8JZS6 575 aa16.42■□□□□ 0.22
Ctcf-201ENSMUST00000005841 Olfr668Q8VGW3 318 aa16.42■□□□□ 0.22
Ctcf-201ENSMUST00000005841 DcxrQ91X52 244 aa16.42■□□□□ 0.22
Ctcf-201ENSMUST00000005841 St3gal4Q91Y74 333 aa16.42■□□□□ 0.22
Ctcf-201ENSMUST00000005841 Ptgr1Q91YR9 329 aa16.42■□□□□ 0.22
Ctcf-201ENSMUST00000005841 LrgukQ9D5S7 820 aa16.42■□□□□ 0.22
Ctcf-201ENSMUST00000005841 Pias4Q9JM05 507 aa16.42■□□□□ 0.22
Ctcf-201ENSMUST00000005841 Baz2bA2AUY4 2123 aa16.42■□□□□ 0.22
Ctcf-201ENSMUST00000005841 Ugt2b36Q3UEP4 530 aa16.41■□□□□ 0.22
Ctcf-201ENSMUST00000005841 Cyp2c66Q5GLZ0 490 aa16.41■□□□□ 0.22
Ctcf-201ENSMUST00000005841 CrhbpQ60571 322 aa16.41■□□□□ 0.22
Ctcf-201ENSMUST00000005841 Elavl4Q61701 385 aaKnown RBP16.41■□□□□ 0.22
Ctcf-201ENSMUST00000005841 Yod1Q8CB27 343 aa16.41■□□□□ 0.22
Ctcf-201ENSMUST00000005841 1700020N01RikQ8CF20 87 aa16.41■□□□□ 0.22
Ctcf-201ENSMUST00000005841 Adnp2Q8CHC8 1165 aaKnown RBP16.41■□□□□ 0.22
Ctcf-201ENSMUST00000005841 RbksQ8R1Q9 323 aa16.41■□□□□ 0.22
Ctcf-201ENSMUST00000005841 Vmn1r38Q8R2E1 302 aa16.41■□□□□ 0.22
Ctcf-201ENSMUST00000005841 Oas3Q8VI93 1138 aaKnown RBP16.41■□□□□ 0.22
Ctcf-201ENSMUST00000005841 Lrch4Q921G6 680 aa16.41■□□□□ 0.22
Ctcf-201ENSMUST00000005841 MtapQ9CQ65 283 aa16.41■□□□□ 0.22
Ctcf-201ENSMUST00000005841 XpotQ9CRT8 963 aa16.41■□□□□ 0.22
Ctcf-201ENSMUST00000005841 Snx20Q9D2Y5 313 aa16.41■□□□□ 0.22
Ctcf-201ENSMUST00000005841 Zswim2Q9D9X6 631 aa16.41■□□□□ 0.22
Ctcf-201ENSMUST00000005841 Mrpl46Q9EQI8 283 aa16.41■□□□□ 0.22
Ctcf-201ENSMUST00000005841 FancgQ9EQR6 623 aa16.41■□□□□ 0.22
Ctcf-201ENSMUST00000005841 Olig2Q9EQW6 323 aa16.41■□□□□ 0.22
Ctcf-201ENSMUST00000005841 Hs6st3Q9QYK4 470 aa16.41■□□□□ 0.22
Ctcf-201ENSMUST00000005841 Orc6Q9WUJ8 262 aa16.41■□□□□ 0.22
Ctcf-201ENSMUST00000005841 PtprdQ64487 1912 aa16.41■□□□□ 0.22
Ctcf-201ENSMUST00000005841 Cd300ld2A2A7W0 305 aa16.41■□□□□ 0.22
Ctcf-201ENSMUST00000005841 Tcte1A6H639 498 aa16.41■□□□□ 0.22
Ctcf-201ENSMUST00000005841 Otud4B2RRE7 1107 aaKnown RBP16.41■□□□□ 0.22
Ctcf-201ENSMUST00000005841 EgfP01132 1217 aa16.41■□□□□ 0.22
Ctcf-201ENSMUST00000005841 Inpp1P49442 396 aa16.41■□□□□ 0.22
Ctcf-201ENSMUST00000005841 Gp1bbP56400 206 aa16.41■□□□□ 0.22
Ctcf-201ENSMUST00000005841 Cyp2c38P56655 490 aa16.41■□□□□ 0.22
Ctcf-201ENSMUST00000005841 Pcsk1P63239 753 aa16.41■□□□□ 0.22
Ctcf-201ENSMUST00000005841 Sdr16c6Q05A13 316 aa16.41■□□□□ 0.22
Ctcf-201ENSMUST00000005841 Pydc3Q3V3Q4 588 aa16.41■□□□□ 0.22
Ctcf-201ENSMUST00000005841 Tm7sf2Q71KT5 418 aa16.41■□□□□ 0.22
Ctcf-201ENSMUST00000005841 Olfr1198Q7TR12 308 aa16.41■□□□□ 0.22
Ctcf-201ENSMUST00000005841 Lamp3Q7TST5 411 aa16.41■□□□□ 0.22
Ctcf-201ENSMUST00000005841 Slc8a2Q8K596 921 aa16.41■□□□□ 0.22
Retrieved 100 of 22,080 RNA–protein pairs in 31.3 ms