RNA–Protein interactions for RNA: ENST00000640027.1

MED17-222, Transcript of mediator complex subunit 17, human

TSL 5

Gene MED17, Length 4,569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MED17-222	ENST00000640027	MARCH7	Q9H992	704 aa		13.6	□□□□□ -0.23
MED17-222	ENST00000640027	SEC61A2	Q9H9S3	476 aa		13.6	□□□□□ -0.23
MED17-222	ENST00000640027	S100A14	Q9HCY8	104 aa		13.6	□□□□□ -0.23
MED17-222	ENST00000640027	IL36A	Q9UHA7	158 aa		13.6	□□□□□ -0.23
MED17-222	ENST00000640027	AOC2	O75106	756 aa		13.59	□□□□□ -0.23
MED17-222	ENST00000640027	PAPSS2	O95340	614 aa	Predicted RBP	13.59	□□□□□ -0.23
MED17-222	ENST00000640027	NR4A1	P22736	598 aa		13.59	□□□□□ -0.23
MED17-222	ENST00000640027	PDHA2	P29803	388 aa		13.59	□□□□□ -0.23
MED17-222	ENST00000640027	COL9A3	Q14050	684 aa	Predicted RBP	13.59	□□□□□ -0.23
MED17-222	ENST00000640027	CHRNA6	Q15825	494 aa		13.59	□□□□□ -0.23
MED17-222	ENST00000640027	ARHGAP40	Q5TG30	622 aa		13.59	□□□□□ -0.23
MED17-222	ENST00000640027	SLC29A4	Q7RTT9	530 aa		13.59	□□□□□ -0.23
MED17-222	ENST00000640027	SATL1	Q86VE3	508 aa		13.59	□□□□□ -0.23
MED17-222	ENST00000640027	FAM156A	Q8NDB6	213 aa		13.59	□□□□□ -0.23
MED17-222	ENST00000640027	RGMA	Q96B86	450 aa		13.59	□□□□□ -0.23
MED17-222	ENST00000640027	WDR12	Q9GZL7	423 aa	Known RBP	13.59	□□□□□ -0.23
MED17-222	ENST00000640027	AMBN	Q9NP70	447 aa		13.59	□□□□□ -0.23
MED17-222	ENST00000640027	DAPL1	A0PJW8	107 aa		13.59	□□□□□ -0.23
MED17-222	ENST00000640027	B4GALT2	O60909	372 aa		13.59	□□□□□ -0.23
MED17-222	ENST00000640027	CPNE3	O75131	537 aa	Known RBP	13.59	□□□□□ -0.23
MED17-222	ENST00000640027	HCAR3	P49019	387 aa		13.59	□□□□□ -0.23
MED17-222	ENST00000640027	AP3S2	P59780	193 aa		13.59	□□□□□ -0.23
MED17-222	ENST00000640027	DLG1	Q12959	904 aa		13.59	□□□□□ -0.23
MED17-222	ENST00000640027	KCTD13	Q8WZ19	329 aa		13.59	□□□□□ -0.23
MED17-222	ENST00000640027	DGAT2	Q96PD7	388 aa		13.59	□□□□□ -0.23
MED17-222	ENST00000640027	PIGV	Q9NUD9	493 aa		13.59	□□□□□ -0.23
MED17-222	ENST00000640027	DMAC2	Q9NW81	257 aa		13.59	□□□□□ -0.23
MED17-222	ENST00000640027	NOCT	Q9UK39	431 aa	Known RBP	13.59	□□□□□ -0.23
MED17-222	ENST00000640027	CFL2	Q9Y281	166 aa		13.59	□□□□□ -0.23
MED17-222	ENST00000640027	MAN2B2	Q9Y2E5	1009 aa		13.59	□□□□□ -0.23
MED17-222	ENST00000640027	ITGB4	P16144	1822 aa		13.59	□□□□□ -0.23
MED17-222	ENST00000640027	FAM234B	A2RU67	622 aa		13.59	□□□□□ -0.23
MED17-222	ENST00000640027	CHP2	O43745	196 aa		13.59	□□□□□ -0.23
MED17-222	ENST00000640027	AKAP8	O43823	692 aa	Known RBP	13.59	□□□□□ -0.23
MED17-222	ENST00000640027	MMP20	O60882	483 aa		13.59	□□□□□ -0.23
MED17-222	ENST00000640027	TRAPPC6A	O75865	159 aa		13.59	□□□□□ -0.23
MED17-222	ENST00000640027	PIM1	P11309	404 aa	Predicted RBP	13.59	□□□□□ -0.23
MED17-222	ENST00000640027	NFATC2	Q13469	925 aa		13.59	□□□□□ -0.23
MED17-222	ENST00000640027	CRTC2	Q53ET0	693 aa	Predicted RBP	13.59	□□□□□ -0.23
MED17-222	ENST00000640027	ABHD13	Q7L211	337 aa		13.59	□□□□□ -0.23
MED17-222	ENST00000640027	KIAA1143	Q96AT1	154 aa	Predicted RBP	13.59	□□□□□ -0.23
MED17-222	ENST00000640027	TLR9	Q9NR96	1032 aa		13.59	□□□□□ -0.23
MED17-222	ENST00000640027	TAC3	Q9UHF0	121 aa		13.59	□□□□□ -0.23
MED17-222	ENST00000640027	COQ4	Q9Y3A0	265 aa		13.59	□□□□□ -0.23
MED17-222	ENST00000640027	KLF1	Q13351	362 aa	Predicted RBP	13.59	□□□□□ -0.23
MED17-222	ENST00000640027	ENPP2	Q13822	863 aa		13.59	□□□□□ -0.23
MED17-222	ENST00000640027	PCBP2	Q15366	365 aa	Known RBP eCLIP	13.59	□□□□□ -0.23
MED17-222	ENST00000640027	LY6G5C	Q5SRR4	150 aa		13.59	□□□□□ -0.23
MED17-222	ENST00000640027	ZNF527	Q8NB42	609 aa		13.59	□□□□□ -0.23
MED17-222	ENST00000640027	HTRA1	Q92743	480 aa		13.59	□□□□□ -0.23
MED17-222	ENST00000640027	DGCR14	Q96DF8	476 aa	Known RBP	13.59	□□□□□ -0.23
MED17-222	ENST00000640027	TFB2M	Q9H5Q4	396 aa	Known RBP	13.59	□□□□□ -0.23
MED17-222	ENST00000640027	IFT46	Q9NQC8	304 aa		13.59	□□□□□ -0.23
MED17-222	ENST00000640027	GDAP2	Q9NXN4	497 aa		13.59	□□□□□ -0.23
MED17-222	ENST00000640027	SPATA7	Q9P0W8	599 aa		13.59	□□□□□ -0.23
MED17-222	ENST00000640027	WASHC1	A8K0Z3	465 aa		13.58	□□□□□ -0.23
MED17-222	ENST00000640027	WASH3P	C4AMC7	463 aa		13.58	□□□□□ -0.23
MED17-222	ENST00000640027	NPHS1	O60500	1241 aa		13.58	□□□□□ -0.23
MED17-222	ENST00000640027	JMJD7	P0C870	316 aa		13.58	□□□□□ -0.23
MED17-222	ENST00000640027	PTX3	P26022	381 aa	Predicted RBP	13.58	□□□□□ -0.23
MED17-222	ENST00000640027	PBX1	P40424	430 aa		13.58	□□□□□ -0.23
MED17-222	ENST00000640027	RAB8A	P61006	207 aa		13.58	□□□□□ -0.23
MED17-222	ENST00000640027	E2F2	Q14209	437 aa		13.58	□□□□□ -0.23
MED17-222	ENST00000640027	WASH2P	Q6VEQ5	465 aa		13.58	□□□□□ -0.23
MED17-222	ENST00000640027	SUPV3L1	Q8IYB8	786 aa	Known RBP eCLIP	13.58	□□□□□ -0.23
MED17-222	ENST00000640027	OR4E2	Q8NGC2	313 aa		13.58	□□□□□ -0.23
MED17-222	ENST00000640027	C1orf216	Q8TAB5	229 aa		13.58	□□□□□ -0.23
MED17-222	ENST00000640027	ROPN1L	Q96C74	230 aa		13.58	□□□□□ -0.23
MED17-222	ENST00000640027	EIF2B3	Q9NR50	452 aa	Known RBP	13.58	□□□□□ -0.23
MED17-222	ENST00000640027	NDUFS4	O43181	175 aa		13.58	□□□□□ -0.24
MED17-222	ENST00000640027	AIRE	O43918	545 aa		13.58	□□□□□ -0.24
MED17-222	ENST00000640027	SIX3	O95343	332 aa	Predicted RBP	13.58	□□□□□ -0.24
MED17-222	ENST00000640027	TYRP1	P17643	537 aa		13.58	□□□□□ -0.24
MED17-222	ENST00000640027	PITRM1	Q5JRX3	1037 aa		13.58	□□□□□ -0.24
MED17-222	ENST00000640027	COLEC12	Q5KU26	742 aa		13.58	□□□□□ -0.24
MED17-222	ENST00000640027	REP15	Q6BDI9	236 aa		13.58	□□□□□ -0.24
MED17-222	ENST00000640027	KCTD8	Q6ZWB6	473 aa		13.58	□□□□□ -0.24
MED17-222	ENST00000640027	OR6N1	Q8NGY5	312 aa		13.58	□□□□□ -0.24
MED17-222	ENST00000640027	OR2L8	Q8NGY9	312 aa		13.58	□□□□□ -0.24
MED17-222	ENST00000640027	SLC22A14	Q9Y267	594 aa		13.58	□□□□□ -0.24
MED17-222	ENST00000640027	EDDM13	A0A1B0GTR0	161 aa		13.58	□□□□□ -0.24
MED17-222	ENST00000640027	FOXO6	A8MYZ6	492 aa		13.58	□□□□□ -0.24
MED17-222	ENST00000640027	TYR	P14679	529 aa		13.58	□□□□□ -0.24
MED17-222	ENST00000640027	FRG2	Q64ET8	278 aa		13.58	□□□□□ -0.24
MED17-222	ENST00000640027	PDE12	Q6L8Q7	609 aa	Known RBP	13.58	□□□□□ -0.24
MED17-222	ENST00000640027	CTU1	Q7Z7A3	348 aa	Known RBP	13.58	□□□□□ -0.24
MED17-222	ENST00000640027	FRG2B	Q96QU4	278 aa		13.58	□□□□□ -0.24
MED17-222	ENST00000640027	EBF3	Q9H4W6	596 aa		13.58	□□□□□ -0.24
MED17-222	ENST00000640027		Q9N2J8	555 aa		13.58	□□□□□ -0.24
MED17-222	ENST00000640027	KCND1	Q9NSA2	647 aa		13.58	□□□□□ -0.24
MED17-222	ENST00000640027	KLRF1	Q9NZS2	232 aa		13.58	□□□□□ -0.24
MED17-222	ENST00000640027	PCDHGB7	Q9Y5F8	929 aa		13.58	□□□□□ -0.24
MED17-222	ENST00000640027	NFKBIE	O00221	500 aa		13.57	□□□□□ -0.24
MED17-222	ENST00000640027	PCDHGA12	O60330	932 aa		13.57	□□□□□ -0.24
MED17-222	ENST00000640027	KAT7	O95251	611 aa		13.57	□□□□□ -0.24
MED17-222	ENST00000640027	HMGN1	P05114	100 aa		13.57	□□□□□ -0.24
MED17-222	ENST00000640027	HLA-DQB2	P05538	268 aa		13.57	□□□□□ -0.24
MED17-222	ENST00000640027	CDKN1C	P49918	316 aa	Predicted RBP	13.57	□□□□□ -0.24
MED17-222	ENST00000640027	ERVK-8	P63133	956 aa		13.57	□□□□□ -0.24
MED17-222	ENST00000640027	CEP97	Q8IW35	865 aa		13.57	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms