RNA–Protein interactions for RNA: ENST00000638016.1

PNKP-230, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 109 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-230ENST00000638016 PGAM1P18669 254 aa17■□□□□ 0.31
PNKP-230ENST00000638016 AGXTP21549 392 aa17■□□□□ 0.31
PNKP-230ENST00000638016 ATP5DP30049 168 aa17■□□□□ 0.31
PNKP-230ENST00000638016 OTX2P32243 289 aa17■□□□□ 0.31
PNKP-230ENST00000638016 CCNFP41002 786 aa17■□□□□ 0.31
PNKP-230ENST00000638016 MRPS25P82663 173 aaKnown RBP17■□□□□ 0.31
PNKP-230ENST00000638016 TIAL1Q01085 375 aaKnown RBP eCLIP17■□□□□ 0.31
PNKP-230ENST00000638016 TSTA3Q13630 321 aaPredicted RBP17■□□□□ 0.31
PNKP-230ENST00000638016 CYP2A13Q16696 494 aa17■□□□□ 0.31
PNKP-230ENST00000638016 BBS9Q3SYG4 887 aa17■□□□□ 0.31
PNKP-230ENST00000638016 ARMC3Q5W041 872 aa17■□□□□ 0.31
PNKP-230ENST00000638016 FRMPD2BQ6IN97 320 aa17■□□□□ 0.31
PNKP-230ENST00000638016 TLDC1Q6P9B6 456 aa17■□□□□ 0.31
PNKP-230ENST00000638016 PIWIL4Q7Z3Z4 852 aaKnown RBP17■□□□□ 0.31
PNKP-230ENST00000638016 KCNMB4Q86W47 210 aa17■□□□□ 0.31
PNKP-230ENST00000638016 CPNE9Q8IYJ1 553 aa17■□□□□ 0.31
PNKP-230ENST00000638016 OR9A1PQ8NGU1 263 aa17■□□□□ 0.31
PNKP-230ENST00000638016 HMGCLL1Q8TB92 370 aa17■□□□□ 0.31
PNKP-230ENST00000638016 SLC22A18Q96BI1 424 aa17■□□□□ 0.31
PNKP-230ENST00000638016 TXLNGQ9NUQ3 528 aa17■□□□□ 0.31
PNKP-230ENST00000638016 ABCF3Q9NUQ8 709 aa17■□□□□ 0.31
PNKP-230ENST00000638016 SPATA7Q9P0W8 599 aa17■□□□□ 0.31
PNKP-230ENST00000638016 PCYOX1Q9UHG3 505 aa17■□□□□ 0.31
PNKP-230ENST00000638016 PTRH2Q9Y3E5 179 aaKnown RBP17■□□□□ 0.31
PNKP-230ENST00000638016 FAM169AQ9Y6X4 670 aa17■□□□□ 0.31
PNKP-230ENST00000638016 RELNP78509 3460 aa17■□□□□ 0.31
PNKP-230ENST00000638016 LOC105369274A0A096LPK9 316 aa16.99■□□□□ 0.31
PNKP-230ENST00000638016 LOC102723532A0A0G2JNH3 316 aa16.99■□□□□ 0.31
PNKP-230ENST00000638016 MYO1CO00159 1063 aa16.99■□□□□ 0.31
PNKP-230ENST00000638016 ERGP11308 486 aa16.99■□□□□ 0.31
PNKP-230ENST00000638016 ALAS2P22557 587 aa16.99■□□□□ 0.31
PNKP-230ENST00000638016 GABRB3P28472 473 aa16.99■□□□□ 0.31
PNKP-230ENST00000638016 VSX2P58304 361 aaPredicted RBP16.99■□□□□ 0.31
PNKP-230ENST00000638016 DCDP81605 110 aaKnown RBP16.99■□□□□ 0.31
PNKP-230ENST00000638016 RAPSNQ13702 412 aa16.99■□□□□ 0.31
PNKP-230ENST00000638016 NKAIN1Q4KMZ8 207 aa16.99■□□□□ 0.31
PNKP-230ENST00000638016 RBM20Q5T481 1227 aaKnown RBP16.99■□□□□ 0.31
PNKP-230ENST00000638016 PAPD7Q5XG87 772 aaKnown RBP16.99■□□□□ 0.31
PNKP-230ENST00000638016 TCTN3Q6NUS6 607 aa16.99■□□□□ 0.31
PNKP-230ENST00000638016 TTLL10Q6ZVT0 673 aa16.99■□□□□ 0.31
PNKP-230ENST00000638016 ASB18Q6ZVZ8 466 aa16.99■□□□□ 0.31
PNKP-230ENST00000638016 COX15Q7KZN9 410 aa16.99■□□□□ 0.31
PNKP-230ENST00000638016 OR4N4Q8N0Y3 316 aa16.99■□□□□ 0.31
PNKP-230ENST00000638016 PROKR1Q8TCW9 393 aa16.99■□□□□ 0.31
PNKP-230ENST00000638016 KCNJ9Q92806 393 aa16.99■□□□□ 0.31
PNKP-230ENST00000638016 SLCO2A1Q92959 643 aa16.99■□□□□ 0.31
PNKP-230ENST00000638016 AARSD1Q9BTE6 412 aaKnown RBP16.99■□□□□ 0.31
PNKP-230ENST00000638016 NDC1Q9BTX1 674 aa16.99■□□□□ 0.31
PNKP-230ENST00000638016 ACSS2Q9NR19 701 aa16.99■□□□□ 0.31
PNKP-230ENST00000638016 IFT80Q9P2H3 777 aaPredicted RBP16.99■□□□□ 0.31
PNKP-230ENST00000638016 NDOR1Q9UHB4 597 aa16.99■□□□□ 0.31
PNKP-230ENST00000638016 IGKV1-8A0A0C4DH67 115 aa16.98■□□□□ 0.31
PNKP-230ENST00000638016 A6NL46 340 aa16.98■□□□□ 0.31
PNKP-230ENST00000638016 TTI1O43156 1089 aa16.98■□□□□ 0.31
PNKP-230ENST00000638016 SYF2O95926 243 aaKnown RBP16.98■□□□□ 0.31
PNKP-230ENST00000638016 IGFBP7Q16270 282 aa16.98■□□□□ 0.31
PNKP-230ENST00000638016 MRPL14Q6P1L8 145 aaKnown RBP16.98■□□□□ 0.31
PNKP-230ENST00000638016 CYHR1Q6ZMK1 362 aa16.98■□□□□ 0.31
PNKP-230ENST00000638016 C17orf53Q8N3J3 647 aaPredicted RBP16.98■□□□□ 0.31
PNKP-230ENST00000638016 SEC14L1Q92503 715 aa16.98■□□□□ 0.31
PNKP-230ENST00000638016 CFAP36Q96G28 342 aa16.98■□□□□ 0.31
PNKP-230ENST00000638016 NAPGQ99747 312 aaPredicted RBP16.98■□□□□ 0.31
PNKP-230ENST00000638016 EBNA1BP2Q99848 306 aaKnown RBP16.98■□□□□ 0.31
PNKP-230ENST00000638016 DPH2Q9BQC3 489 aaPredicted RBP16.98■□□□□ 0.31
PNKP-230ENST00000638016 SELENOSQ9BQE4 189 aa16.98■□□□□ 0.31
PNKP-230ENST00000638016 DPH7Q9BTV6 452 aa16.98■□□□□ 0.31
PNKP-230ENST00000638016 TRIM31Q9BZY9 425 aa16.98■□□□□ 0.31
PNKP-230ENST00000638016 CCDC68Q9H2F9 335 aa16.98■□□□□ 0.31
PNKP-230ENST00000638016 CUTCQ9NTM9 273 aa16.98■□□□□ 0.31
PNKP-230ENST00000638016 INTS7Q9NVH2 962 aaKnown RBP16.98■□□□□ 0.31
PNKP-230ENST00000638016 TAC3Q9UHF0 121 aa16.98■□□□□ 0.31
PNKP-230ENST00000638016 SRPK3Q9UPE1 567 aa16.98■□□□□ 0.31
PNKP-230ENST00000638016 CHMP2BQ9UQN3 213 aa16.98■□□□□ 0.31
PNKP-230ENST00000638016 VPS9D1Q9Y2B5 631 aa16.98■□□□□ 0.31
PNKP-230ENST00000638016 DHRS7Q9Y394 339 aa16.98■□□□□ 0.31
PNKP-230ENST00000638016 FLNBO75369 2602 aaKnown RBP16.97■□□□□ 0.31
PNKP-230ENST00000638016 SLC16A8O95907 504 aa16.97■□□□□ 0.31
PNKP-230ENST00000638016 CATP04040 527 aaKnown RBP16.97■□□□□ 0.31
PNKP-230ENST00000638016 UMODP07911 640 aa16.97■□□□□ 0.31
PNKP-230ENST00000638016 CASRP41180 1078 aa16.97■□□□□ 0.31
PNKP-230ENST00000638016 CDKN2DP55273 166 aa16.97■□□□□ 0.31
PNKP-230ENST00000638016 WASHC2DQ5SRD0 308 aa16.97■□□□□ 0.31
PNKP-230ENST00000638016 TRMT10BQ6PF06 316 aaKnown RBP16.97■□□□□ 0.31
PNKP-230ENST00000638016 MRGPREQ86SM8 312 aa16.97■□□□□ 0.31
PNKP-230ENST00000638016 RAB42Q8N4Z0 105 aa16.97■□□□□ 0.31
PNKP-230ENST00000638016 C2CD4AQ8NCU7 369 aaPredicted RBP16.97■□□□□ 0.31
PNKP-230ENST00000638016 FDCSPQ8NFU4 85 aa16.97■□□□□ 0.31
PNKP-230ENST00000638016 MAGEC3Q8TD91 643 aa16.97■□□□□ 0.31
PNKP-230ENST00000638016 ZNF480Q8WV37 535 aa16.97■□□□□ 0.31
PNKP-230ENST00000638016 DLG3Q92796 817 aa16.97■□□□□ 0.31
PNKP-230ENST00000638016 ZNF285Q96NJ3 590 aa16.97■□□□□ 0.31
PNKP-230ENST00000638016 FAM167BQ9BTA0 163 aa16.97■□□□□ 0.31
PNKP-230ENST00000638016 SLC25A23Q9BV35 468 aa16.97■□□□□ 0.31
PNKP-230ENST00000638016 NUDT9Q9BW91 350 aa16.97■□□□□ 0.31
PNKP-230ENST00000638016 GPN3Q9UHW5 284 aaPredicted RBP16.97■□□□□ 0.31
PNKP-230ENST00000638016 ANAPC2Q9UJX6 822 aa16.97■□□□□ 0.31
PNKP-230ENST00000638016 PADI2Q9Y2J8 665 aa16.97■□□□□ 0.31
PNKP-230ENST00000638016 MRFAP1Q9Y605 127 aa16.97■□□□□ 0.31
PNKP-230ENST00000638016 MAU2Q9Y6X3 613 aa16.97■□□□□ 0.31
PNKP-230ENST00000638016 A0A1B0GX78 115 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms