RNA–Protein interactions for RNA: ENST00000637897.1

PNKP-229, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 190 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-229ENST00000637897 ENDOVQ8N8Q3 282 aaKnown RBP7.56□□□□□ -1.2
PNKP-229ENST00000637897 NAT8LQ8N9F0 302 aa7.56□□□□□ -1.2
PNKP-229ENST00000637897 OR4L1Q8NH43 312 aa7.56□□□□□ -1.2
PNKP-229ENST00000637897 OR5K2Q8NHB8 316 aa7.56□□□□□ -1.2
PNKP-229ENST00000637897 C9orf43Q8TAL5 461 aaPredicted RBP7.56□□□□□ -1.2
PNKP-229ENST00000637897 CPT1BQ92523 772 aa7.56□□□□□ -1.2
PNKP-229ENST00000637897 KIAA1143Q96AT1 154 aaPredicted RBP7.56□□□□□ -1.2
PNKP-229ENST00000637897 GBP5Q96PP8 586 aa7.56□□□□□ -1.2
PNKP-229ENST00000637897 PPP1R2P1Q96PQ5 205 aa7.56□□□□□ -1.2
PNKP-229ENST00000637897 SLC30A3Q99726 388 aa7.56□□□□□ -1.2
PNKP-229ENST00000637897 EFHD1Q9BUP0 239 aa7.56□□□□□ -1.2
PNKP-229ENST00000637897 KIFC1Q9BW19 673 aa7.56□□□□□ -1.2
PNKP-229ENST00000637897 FAM117AQ9C073 453 aa7.56□□□□□ -1.2
PNKP-229ENST00000637897 CLMPQ9H6B4 373 aa7.56□□□□□ -1.2
PNKP-229ENST00000637897 EIF2B3Q9NR50 452 aaKnown RBP7.56□□□□□ -1.2
PNKP-229ENST00000637897 IL1RAPL1Q9NZN1 696 aa7.56□□□□□ -1.2
PNKP-229ENST00000637897 FARSAQ9Y285 508 aaKnown RBP7.56□□□□□ -1.2
PNKP-229ENST00000637897 HEBP2Q9Y5Z4 205 aa7.56□□□□□ -1.2
PNKP-229ENST00000637897 DOCK10Q96BY6 2186 aa7.56□□□□□ -1.2
PNKP-229ENST00000637897 USP9YO00507 2555 aaPredicted RBP7.55□□□□□ -1.2
PNKP-229ENST00000637897 PIPSLA2A3N6 862 aa7.55□□□□□ -1.2
PNKP-229ENST00000637897 E7ESA3 106 aa7.55□□□□□ -1.2
PNKP-229ENST00000637897 E7EVH7 732 aa7.55□□□□□ -1.2
PNKP-229ENST00000637897 CPNE3O75131 537 aaKnown RBP7.55□□□□□ -1.2
PNKP-229ENST00000637897 CDH16O75309 829 aa7.55□□□□□ -1.2
PNKP-229ENST00000637897 CEACAM4O75871 244 aa7.55□□□□□ -1.2
PNKP-229ENST00000637897 RAB40ALP0C0E4 278 aa7.55□□□□□ -1.2
PNKP-229ENST00000637897 SFTPCP11686 197 aa7.55□□□□□ -1.2
PNKP-229ENST00000637897 HPDP32754 393 aaPredicted RBP7.55□□□□□ -1.2
PNKP-229ENST00000637897 MDH1P40925 334 aaKnown RBP7.55□□□□□ -1.2
PNKP-229ENST00000637897 GNGT1P63211 74 aa7.55□□□□□ -1.2
PNKP-229ENST00000637897 BASP1P80723 227 aaKnown RBP7.55□□□□□ -1.2
PNKP-229ENST00000637897 TIAL1Q01085 375 aaKnown RBP eCLIP7.55□□□□□ -1.2
PNKP-229ENST00000637897 KCNC4Q03721 635 aa7.55□□□□□ -1.2
PNKP-229ENST00000637897 PDIA2Q13087 525 aaKnown RBP7.55□□□□□ -1.2
PNKP-229ENST00000637897 RASA2Q15283 850 aa7.55□□□□□ -1.2
PNKP-229ENST00000637897 DNAJC21Q5F1R6 531 aaKnown RBP7.55□□□□□ -1.2
PNKP-229ENST00000637897 TNFAIP8L3Q5GJ75 292 aa7.55□□□□□ -1.2
PNKP-229ENST00000637897 PCID2Q5JVF3 399 aa7.55□□□□□ -1.2
PNKP-229ENST00000637897 TCTN3Q6NUS6 607 aa7.55□□□□□ -1.2
PNKP-229ENST00000637897 LRRC8BQ6P9F7 803 aa7.55□□□□□ -1.2
PNKP-229ENST00000637897 TMEM126BQ8IUX1 230 aa7.55□□□□□ -1.2
PNKP-229ENST00000637897 SYTL1Q8IYJ3 562 aa7.55□□□□□ -1.2
PNKP-229ENST00000637897 C19orf47Q8N9M1 422 aaKnown RBP7.55□□□□□ -1.2
PNKP-229ENST00000637897 DNAAF3Q8N9W5 541 aa7.55□□□□□ -1.2
PNKP-229ENST00000637897 Q8NA96 180 aa7.55□□□□□ -1.2
PNKP-229ENST00000637897 GIMAP7Q8NHV1 300 aa7.55□□□□□ -1.2
PNKP-229ENST00000637897 UHMK1Q8TAS1 419 aaKnown RBP7.55□□□□□ -1.2
PNKP-229ENST00000637897 EPS8L3Q8TE67 593 aaKnown RBP7.55□□□□□ -1.2
PNKP-229ENST00000637897 PYROXD1Q8WU10 500 aa7.55□□□□□ -1.2
PNKP-229ENST00000637897 LPGAT1Q92604 370 aa7.55□□□□□ -1.2
PNKP-229ENST00000637897 PEX13Q92968 403 aa7.55□□□□□ -1.2
PNKP-229ENST00000637897 MR1Q95460 341 aa7.55□□□□□ -1.2
PNKP-229ENST00000637897 MIB2Q96AX9 1013 aa7.55□□□□□ -1.2
PNKP-229ENST00000637897 ZNF285Q96NJ3 590 aa7.55□□□□□ -1.2
PNKP-229ENST00000637897 GPR87Q9BY21 358 aa7.55□□□□□ -1.2
PNKP-229ENST00000637897 CHRNA10Q9GZZ6 450 aa7.55□□□□□ -1.2
PNKP-229ENST00000637897 PLAC1Q9HBJ0 212 aa7.55□□□□□ -1.2
PNKP-229ENST00000637897 SOHLH2Q9NX45 425 aa7.55□□□□□ -1.2
PNKP-229ENST00000637897 FETUBQ9UGM5 382 aa7.55□□□□□ -1.2
PNKP-229ENST00000637897 LGALS13Q9UHV8 139 aa7.55□□□□□ -1.2
PNKP-229ENST00000637897 KCND3Q9UK17 655 aa7.55□□□□□ -1.2
PNKP-229ENST00000637897 TCFL5Q9UL49 500 aa7.55□□□□□ -1.2
PNKP-229ENST00000637897 POLHQ9Y253 713 aa7.55□□□□□ -1.2
PNKP-229ENST00000637897 ASF1AQ9Y294 204 aa7.55□□□□□ -1.2
PNKP-229ENST00000637897 TDRKHQ9Y2W6 561 aaKnown RBP7.55□□□□□ -1.2
PNKP-229ENST00000637897 CNTRLQ7Z7A1 2325 aa7.55□□□□□ -1.2
PNKP-229ENST00000637897 HEATR5BQ9P2D3 2071 aa7.55□□□□□ -1.2
PNKP-229ENST00000637897 HIVEP3Q5T1R4 2406 aa7.54□□□□□ -1.2
PNKP-229ENST00000637897 SPTAN1Q13813 2472 aaKnown RBP7.54□□□□□ -1.2
PNKP-229ENST00000637897 ZCWPW2A0A1B0GU75 182 aa7.54□□□□□ -1.2
PNKP-229ENST00000637897 EXOC1LA0A1B0GW35 172 aa7.54□□□□□ -1.2
PNKP-229ENST00000637897 ARGFXA6NJG6 315 aa7.54□□□□□ -1.2
PNKP-229ENST00000637897 SMIM23A6NLE4 172 aa7.54□□□□□ -1.2
PNKP-229ENST00000637897 C2orf74A8MZ97 194 aa7.54□□□□□ -1.2
PNKP-229ENST00000637897 IFRD1O00458 451 aaPredicted RBP7.54□□□□□ -1.2
PNKP-229ENST00000637897 PRMT5O14744 637 aaPredicted RBP7.54□□□□□ -1.2
PNKP-229ENST00000637897 CD3EAPO15446 510 aaKnown RBP7.54□□□□□ -1.2
PNKP-229ENST00000637897 CTSVO60911 334 aa7.54□□□□□ -1.2
PNKP-229ENST00000637897 NIPSNAP2O75323 286 aa7.54□□□□□ -1.2
PNKP-229ENST00000637897 C1orf105O95561 183 aa7.54□□□□□ -1.2
PNKP-229ENST00000637897 MT-ND3P03897 115 aa7.54□□□□□ -1.2
PNKP-229ENST00000637897 UMODP07911 640 aa7.54□□□□□ -1.2
PNKP-229ENST00000637897 GSTM1P09488 218 aa7.54□□□□□ -1.2
PNKP-229ENST00000637897 CCNYL3P0C7X3 344 aa7.54□□□□□ -1.2
PNKP-229ENST00000637897 RNF224P0DH78 156 aa7.54□□□□□ -1.2
PNKP-229ENST00000637897 TPSB2P20231 275 aa7.54□□□□□ -1.2
PNKP-229ENST00000637897 MAGP20916 626 aa7.54□□□□□ -1.2
PNKP-229ENST00000637897 RPS3P23396 243 aaKnown RBP eCLIP7.54□□□□□ -1.2
PNKP-229ENST00000637897 PSMB5P28074 263 aa7.54□□□□□ -1.2
PNKP-229ENST00000637897 MAGEA3P43357 314 aa7.54□□□□□ -1.2
PNKP-229ENST00000637897 BDKRB1P46663 353 aa7.54□□□□□ -1.2
PNKP-229ENST00000637897 CD97P48960 835 aa7.54□□□□□ -1.2
PNKP-229ENST00000637897 EFNA3P52797 238 aa7.54□□□□□ -1.2
PNKP-229ENST00000637897 MLLT10P55197 1068 aa7.54□□□□□ -1.2
PNKP-229ENST00000637897 SARNPP82979 210 aaKnown RBP7.54□□□□□ -1.2
PNKP-229ENST00000637897 CDK16Q00536 496 aa7.54□□□□□ -1.2
PNKP-229ENST00000637897 MC1RQ01726 317 aa7.54□□□□□ -1.2
PNKP-229ENST00000637897 GSTM4Q03013 218 aa7.54□□□□□ -1.2
PNKP-229ENST00000637897 HSPA14Q0VDF9 509 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms