RNA–Protein interactions for RNA: ENST00000636964.1

CLN6-217, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 3,335 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-217ENST00000636964 WWOXQ9NZC7 414 aa11.22□□□□□ -0.61
CLN6-217ENST00000636964 IGLV3-16A0A075B6K0 115 aa11.21□□□□□ -0.61
CLN6-217ENST00000636964 DLGAP1O14490 977 aa11.21□□□□□ -0.61
CLN6-217ENST00000636964 MSH3P20585 1137 aa11.21□□□□□ -0.61
CLN6-217ENST00000636964 CDH3P22223 829 aa11.21□□□□□ -0.61
CLN6-217ENST00000636964 GJA4P35212 333 aa11.21□□□□□ -0.61
CLN6-217ENST00000636964 MMP12P39900 470 aa11.21□□□□□ -0.61
CLN6-217ENST00000636964 OPRD1P41143 372 aa11.21□□□□□ -0.61
CLN6-217ENST00000636964 DIO3P55073 304 aa11.21□□□□□ -0.61
CLN6-217ENST00000636964 C21orf59P57076 290 aa11.21□□□□□ -0.61
CLN6-217ENST00000636964 DLX2Q07687 328 aaPredicted RBP11.21□□□□□ -0.61
CLN6-217ENST00000636964 ZNF284Q2VY69 593 aa11.21□□□□□ -0.61
CLN6-217ENST00000636964 HENMT1Q5T8I9 393 aaKnown RBP11.21□□□□□ -0.61
CLN6-217ENST00000636964 ZDHHC20Q5W0Z9 365 aa11.21□□□□□ -0.61
CLN6-217ENST00000636964 ANKRD26P1Q6NSI1 321 aa11.21□□□□□ -0.61
CLN6-217ENST00000636964 ERAP2Q6P179 960 aa11.21□□□□□ -0.61
CLN6-217ENST00000636964 DPPA4Q7L190 304 aa11.21□□□□□ -0.61
CLN6-217ENST00000636964 BTLAQ7Z6A9 289 aa11.21□□□□□ -0.61
CLN6-217ENST00000636964 YAF2Q8IY57 180 aa11.21□□□□□ -0.61
CLN6-217ENST00000636964 FGF14Q92915 247 aa11.21□□□□□ -0.61
CLN6-217ENST00000636964 ULK4Q96C45 1275 aa11.21□□□□□ -0.61
CLN6-217ENST00000636964 RBM14Q96PK6 669 aaKnown RBP11.21□□□□□ -0.61
CLN6-217ENST00000636964 TMEM79Q9BSE2 394 aa11.21□□□□□ -0.61
CLN6-217ENST00000636964 C1QTNF3Q9BXJ4 246 aa11.21□□□□□ -0.61
CLN6-217ENST00000636964 PFDN2Q9UHV9 154 aa11.21□□□□□ -0.61
CLN6-217ENST00000636964 MYRFQ9Y2G1 1151 aa11.21□□□□□ -0.61
CLN6-217ENST00000636964 OARD1Q9Y530 152 aa11.21□□□□□ -0.61
CLN6-217ENST00000636964 OR7A17O14581 309 aa11.21□□□□□ -0.62
CLN6-217ENST00000636964 BCAS2O75934 225 aaPredicted RBP11.21□□□□□ -0.62
CLN6-217ENST00000636964 EPHX1P07099 455 aa11.21□□□□□ -0.62
CLN6-217ENST00000636964 C8BP07358 591 aa11.21□□□□□ -0.62
CLN6-217ENST00000636964 CAPN1P07384 714 aa11.21□□□□□ -0.62
CLN6-217ENST00000636964 ZNF12P17014 697 aa11.21□□□□□ -0.62
CLN6-217ENST00000636964 TCN1P20061 433 aaPredicted RBP11.21□□□□□ -0.62
CLN6-217ENST00000636964 AOAHP28039 575 aa11.21□□□□□ -0.62
CLN6-217ENST00000636964 IL12RB1P42701 662 aa11.21□□□□□ -0.62
CLN6-217ENST00000636964 SOX9P48436 509 aa11.21□□□□□ -0.62
CLN6-217ENST00000636964 HTR6P50406 440 aa11.21□□□□□ -0.62
CLN6-217ENST00000636964 PMS2P3Q13401 168 aa11.21□□□□□ -0.62
CLN6-217ENST00000636964 SQLEQ14534 574 aa11.21□□□□□ -0.62
CLN6-217ENST00000636964 MTX3Q5HYI7 312 aa11.21□□□□□ -0.62
CLN6-217ENST00000636964 EGFLAMQ63HQ2 1017 aa11.21□□□□□ -0.62
CLN6-217ENST00000636964 NIPAL1Q6NVV3 410 aa11.21□□□□□ -0.62
CLN6-217ENST00000636964 SLC38A6Q8IZM9 456 aa11.21□□□□□ -0.62
CLN6-217ENST00000636964 LILRA3Q8N6C8 439 aaPredicted RBP11.21□□□□□ -0.62
CLN6-217ENST00000636964 NATD1Q8N6N6 113 aa11.21□□□□□ -0.62
CLN6-217ENST00000636964 CATSPER1Q8NEC5 780 aa11.21□□□□□ -0.62
CLN6-217ENST00000636964 OR4F6Q8NGB9 312 aa11.21□□□□□ -0.62
CLN6-217ENST00000636964 OR2T11Q8NH01 316 aa11.21□□□□□ -0.62
CLN6-217ENST00000636964 METTL6Q8TCB7 284 aa11.21□□□□□ -0.62
CLN6-217ENST00000636964 OR8D1Q8WZ84 308 aa11.21□□□□□ -0.62
CLN6-217ENST00000636964 ELMO1Q92556 727 aa11.21□□□□□ -0.62
CLN6-217ENST00000636964 FOXJ1Q92949 421 aa11.21□□□□□ -0.62
CLN6-217ENST00000636964 FAM129BQ96TA1 746 aa11.21□□□□□ -0.62
CLN6-217ENST00000636964 C1orf50Q9BV19 199 aa11.21□□□□□ -0.62
CLN6-217ENST00000636964 EFCAB1Q9HAE3 211 aa11.21□□□□□ -0.62
CLN6-217ENST00000636964 PALMDQ9NP74 551 aa11.21□□□□□ -0.62
CLN6-217ENST00000636964 PTBP2Q9UKA9 531 aaKnown RBP11.21□□□□□ -0.62
CLN6-217ENST00000636964 CNOT11Q9UKZ1 510 aaKnown RBP11.21□□□□□ -0.62
CLN6-217ENST00000636964 ANGPTL3Q9Y5C1 460 aa11.21□□□□□ -0.62
CLN6-217ENST00000636964 DOCK8Q8NF50 2099 aa11.21□□□□□ -0.62
CLN6-217ENST00000636964 TRIOO75962 3097 aa11.21□□□□□ -0.62
CLN6-217ENST00000636964 TSPAN11A1L157 253 aa11.2□□□□□ -0.62
CLN6-217ENST00000636964 K7ESM1 405 aa11.2□□□□□ -0.62
CLN6-217ENST00000636964 FFAR3O14843 346 aa11.2□□□□□ -0.62
CLN6-217ENST00000636964 GPR42O15529 346 aa11.2□□□□□ -0.62
CLN6-217ENST00000636964 AQP9O43315 295 aa11.2□□□□□ -0.62
CLN6-217ENST00000636964 MMP20O60882 483 aa11.2□□□□□ -0.62
CLN6-217ENST00000636964 PRNPP04156 253 aa11.2□□□□□ -0.62
CLN6-217ENST00000636964 PBLDP30039 288 aaPredicted RBP11.2□□□□□ -0.62
CLN6-217ENST00000636964 HMOX2P30519 316 aa11.2□□□□□ -0.62
CLN6-217ENST00000636964 HSPA13P48723 471 aa11.2□□□□□ -0.62
CLN6-217ENST00000636964 RPIAP49247 311 aa11.2□□□□□ -0.62
CLN6-217ENST00000636964 CTSCP53634 463 aa11.2□□□□□ -0.62
CLN6-217ENST00000636964 ZBED5Q49AG3 693 aa11.2□□□□□ -0.62
CLN6-217ENST00000636964 ZFP1Q6P2D0 407 aa11.2□□□□□ -0.62
CLN6-217ENST00000636964 TMEM26Q6ZUK4 368 aa11.2□□□□□ -0.62
CLN6-217ENST00000636964 TECPR1Q7Z6L1 1165 aa11.2□□□□□ -0.62
CLN6-217ENST00000636964 RAVER1Q8IY67 606 aaKnown RBP11.2□□□□□ -0.62
CLN6-217ENST00000636964 DDHD1Q8NEL9 900 aa11.2□□□□□ -0.62
CLN6-217ENST00000636964 RHBDF1Q96CC6 855 aa11.2□□□□□ -0.62
CLN6-217ENST00000636964 MRPL38Q96DV4 380 aaKnown RBP11.2□□□□□ -0.62
CLN6-217ENST00000636964 RMND5BQ96G75 393 aaPredicted RBP11.2□□□□□ -0.62
CLN6-217ENST00000636964 DOK1Q99704 481 aa11.2□□□□□ -0.62
CLN6-217ENST00000636964 NPLQ9BXD5 320 aaPredicted RBP11.2□□□□□ -0.62
CLN6-217ENST00000636964 ARL15Q9NXU5 204 aa11.2□□□□□ -0.62
CLN6-217ENST00000636964 HCN2Q9UL51 889 aa11.2□□□□□ -0.62
CLN6-217ENST00000636964 CFL2Q9Y281 166 aa11.2□□□□□ -0.62
CLN6-217ENST00000636964 EDDM13A0A1B0GTR0 161 aa11.2□□□□□ -0.62
CLN6-217ENST00000636964 SPINT1O43278 529 aa11.2□□□□□ -0.62
CLN6-217ENST00000636964 UROSP10746 265 aa11.2□□□□□ -0.62
CLN6-217ENST00000636964 GDI1P31150 447 aa11.2□□□□□ -0.62
CLN6-217ENST00000636964 SP140Q13342 867 aa11.2□□□□□ -0.62
CLN6-217ENST00000636964 SIM2Q14190 667 aaPredicted RBP11.2□□□□□ -0.62
CLN6-217ENST00000636964 PCBP2Q15366 365 aaKnown RBP eCLIP11.2□□□□□ -0.62
CLN6-217ENST00000636964 NHSL2Q5HYW2 709 aa11.2□□□□□ -0.62
CLN6-217ENST00000636964 ANKRD54Q6NXT1 300 aa11.2□□□□□ -0.62
CLN6-217ENST00000636964 BNC2Q6ZN30 1099 aaPredicted RBP11.2□□□□□ -0.62
CLN6-217ENST00000636964 UBE2R2Q712K3 238 aaPredicted RBP11.2□□□□□ -0.62
CLN6-217ENST00000636964 PHYKPLQ8IUZ5 450 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms