RNA–Protein interactions for RNA: ENST00000636214.1

PNKP-225, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 805 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-225ENST00000636214 IRAK1BP1Q5VVH5 260 aa17.19■□□□□ 0.34
PNKP-225ENST00000636214 FCRL6Q6DN72 434 aa17.19■□□□□ 0.34
PNKP-225ENST00000636214 ZNF470Q6ECI4 717 aa17.19■□□□□ 0.34
PNKP-225ENST00000636214 CCDC137Q6PK04 289 aaKnown RBP17.19■□□□□ 0.34
PNKP-225ENST00000636214 CILP2Q8IUL8 1156 aa17.19■□□□□ 0.34
PNKP-225ENST00000636214 FAM26EQ8N5C1 309 aa17.19■□□□□ 0.34
PNKP-225ENST00000636214 HMGCLL1Q8TB92 370 aa17.19■□□□□ 0.34
PNKP-225ENST00000636214 TM9SF4Q92544 642 aa17.19■□□□□ 0.34
PNKP-225ENST00000636214 MFRPQ9BY79 579 aa17.19■□□□□ 0.34
PNKP-225ENST00000636214 P4HTMQ9NXG6 502 aa17.19■□□□□ 0.34
PNKP-225ENST00000636214 IL1RAPL1Q9NZN1 696 aa17.19■□□□□ 0.34
PNKP-225ENST00000636214 C5AR2Q9P296 337 aa17.19■□□□□ 0.34
PNKP-225ENST00000636214 CDC23Q9UJX2 597 aa17.19■□□□□ 0.34
PNKP-225ENST00000636214 NXT1Q9UKK6 140 aaKnown RBP17.19■□□□□ 0.34
PNKP-225ENST00000636214 CNTRLQ7Z7A1 2325 aa17.19■□□□□ 0.34
PNKP-225ENST00000636214 FAM237BA0A1B0GVD1 139 aa17.18■□□□□ 0.34
PNKP-225ENST00000636214 GOLGA8MH3BSY2 632 aa17.18■□□□□ 0.34
PNKP-225ENST00000636214 SRPX2O60687 465 aaPredicted RBP17.18■□□□□ 0.34
PNKP-225ENST00000636214 VPS26AO75436 327 aa17.18■□□□□ 0.34
PNKP-225ENST00000636214 USP1O94782 785 aa17.18■□□□□ 0.34
PNKP-225ENST00000636214 IPO13O94829 963 aaKnown RBP17.18■□□□□ 0.34
PNKP-225ENST00000636214 ALBP02768 609 aa17.18■□□□□ 0.34
PNKP-225ENST00000636214 ITGAXP20702 1163 aa17.18■□□□□ 0.34
PNKP-225ENST00000636214 PSMB5P28074 263 aa17.18■□□□□ 0.34
PNKP-225ENST00000636214 RPA3P35244 121 aaPredicted RBP17.18■□□□□ 0.34
PNKP-225ENST00000636214 COILP38432 576 aaPredicted RBP17.18■□□□□ 0.34
PNKP-225ENST00000636214 MRPL14Q6P1L8 145 aaKnown RBP17.18■□□□□ 0.34
PNKP-225ENST00000636214 GALNT16Q8N428 558 aa17.18■□□□□ 0.34
PNKP-225ENST00000636214 RASGEF1CQ8N431 466 aa17.18■□□□□ 0.34
PNKP-225ENST00000636214 GALNT11Q8NCW6 608 aa17.18■□□□□ 0.34
PNKP-225ENST00000636214 MCUQ8NE86 351 aa17.18■□□□□ 0.34
PNKP-225ENST00000636214 OR2L3Q8NG85 312 aa17.18■□□□□ 0.34
PNKP-225ENST00000636214 OR9A1PQ8NGU1 263 aa17.18■□□□□ 0.34
PNKP-225ENST00000636214 GABPB2Q8TAK5 448 aaPredicted RBP17.18■□□□□ 0.34
PNKP-225ENST00000636214 CALML6Q8TD86 181 aa17.18■□□□□ 0.34
PNKP-225ENST00000636214 SMPDL3AQ92484 453 aa17.18■□□□□ 0.34
PNKP-225ENST00000636214 SLC29A3Q9BZD2 475 aa17.18■□□□□ 0.34
PNKP-225ENST00000636214 UTP6Q9NYH9 597 aaKnown RBP17.18■□□□□ 0.34
PNKP-225ENST00000636214 ANKMY1Q9P2S6 941 aa17.18■□□□□ 0.34
PNKP-225ENST00000636214 MAD1L1Q9Y6D9 718 aa17.18■□□□□ 0.34
PNKP-225ENST00000636214 A0A0J9YVX5 310 aa17.17■□□□□ 0.34
PNKP-225ENST00000636214 MAST4O15021 2626 aa17.17■□□□□ 0.34
PNKP-225ENST00000636214 CCNDBP1O95273 360 aa17.17■□□□□ 0.34
PNKP-225ENST00000636214 MATN4O95460 622 aa17.17■□□□□ 0.34
PNKP-225ENST00000636214 EIF2S1P05198 315 aaKnown RBP17.17■□□□□ 0.34
PNKP-225ENST00000636214 MCM3P25205 808 aa17.17■□□□□ 0.34
PNKP-225ENST00000636214 HSD17B2P37059 387 aa17.17■□□□□ 0.34
PNKP-225ENST00000636214 SPTAN1Q13813 2472 aaKnown RBP17.17■□□□□ 0.34
PNKP-225ENST00000636214 KCTD19Q17RG1 926 aaPredicted RBP17.17■□□□□ 0.34
PNKP-225ENST00000636214 KLHL38Q2WGJ6 581 aa17.17■□□□□ 0.34
PNKP-225ENST00000636214 CCSMST1Q4G0I0 132 aa17.17■□□□□ 0.34
PNKP-225ENST00000636214 ANKRD22Q5VYY1 191 aa17.17■□□□□ 0.34
PNKP-225ENST00000636214 JMJD6Q6NYC1 403 aaPredicted RBP17.17■□□□□ 0.34
PNKP-225ENST00000636214 TTC27Q6P3X3 843 aa17.17■□□□□ 0.34
PNKP-225ENST00000636214 PNPLA2Q96AD5 504 aa17.17■□□□□ 0.34
PNKP-225ENST00000636214 NACC2Q96BF6 587 aa17.17■□□□□ 0.34
PNKP-225ENST00000636214 SMAD5Q99717 465 aaKnown RBP17.17■□□□□ 0.34
PNKP-225ENST00000636214 ACAT2Q9BWD1 397 aa17.17■□□□□ 0.34
PNKP-225ENST00000636214 WDR54Q9H977 334 aa17.17■□□□□ 0.34
PNKP-225ENST00000636214 MRPS30Q9NP92 439 aaKnown RBP17.17■□□□□ 0.34
PNKP-225ENST00000636214 ATP13A2Q9NQ11 1180 aa17.17■□□□□ 0.34
PNKP-225ENST00000636214 LUZP4Q9P127 313 aa17.17■□□□□ 0.34
PNKP-225ENST00000636214 ARHGEF33A8MVX0 844 aa17.16■□□□□ 0.34
PNKP-225ENST00000636214 AGPSO00116 658 aa17.16■□□□□ 0.34
PNKP-225ENST00000636214 ZSCAN12O43309 604 aa17.16■□□□□ 0.34
PNKP-225ENST00000636214 PHF2O75151 1096 aa17.16■□□□□ 0.34
PNKP-225ENST00000636214 ITGA3P26006 1051 aa17.16■□□□□ 0.34
PNKP-225ENST00000636214 OCA2Q04671 838 aa17.16■□□□□ 0.34
PNKP-225ENST00000636214 MYBPC3Q14896 1274 aa17.16■□□□□ 0.34
PNKP-225ENST00000636214 PPP1R7Q15435 360 aa17.16■□□□□ 0.34
PNKP-225ENST00000636214 RBBP7Q16576 425 aa17.16■□□□□ 0.34
PNKP-225ENST00000636214 LONRF1Q17RB8 773 aa17.16■□□□□ 0.34
PNKP-225ENST00000636214 ACSBG2Q5FVE4 666 aa17.16■□□□□ 0.34
PNKP-225ENST00000636214 WASHC2DQ5SRD0 308 aa17.16■□□□□ 0.34
PNKP-225ENST00000636214 CENPUQ71F23 418 aa17.16■□□□□ 0.34
PNKP-225ENST00000636214 OVCH1Q7RTY7 1134 aa17.16■□□□□ 0.34
PNKP-225ENST00000636214 CAND1Q86VP6 1230 aaKnown RBP17.16■□□□□ 0.34
PNKP-225ENST00000636214 LMNTD2Q8IXW0 634 aa17.16■□□□□ 0.34
PNKP-225ENST00000636214 MS4A14Q96JA4 679 aa17.16■□□□□ 0.34
PNKP-225ENST00000636214 SERPINB12Q96P63 405 aa17.16■□□□□ 0.34
PNKP-225ENST00000636214 ZFYVE21Q9BQ24 234 aa17.16■□□□□ 0.34
PNKP-225ENST00000636214 C20orf96Q9NUD7 363 aaPredicted RBP17.16■□□□□ 0.34
PNKP-225ENST00000636214 ZC3H7BQ9UGR2 993 aaKnown RBP17.16■□□□□ 0.34
PNKP-225ENST00000636214 HYKKA2RU49 373 aa17.15■□□□□ 0.34
PNKP-225ENST00000636214 KRT87PA6NCN2 255 aa17.15■□□□□ 0.34
PNKP-225ENST00000636214 PRICKLE3O43900 615 aaPredicted RBP17.15■□□□□ 0.34
PNKP-225ENST00000636214 CTSVO60911 334 aa17.15■□□□□ 0.34
PNKP-225ENST00000636214 CNOT3O75175 753 aaKnown RBP17.15■□□□□ 0.34
PNKP-225ENST00000636214 SORBS2O94875 1100 aaKnown RBP17.15■□□□□ 0.34
PNKP-225ENST00000636214 SYF2O95926 243 aaKnown RBP17.15■□□□□ 0.34
PNKP-225ENST00000636214 UMODP07911 640 aa17.15■□□□□ 0.34
PNKP-225ENST00000636214 MMP11P24347 488 aa17.15■□□□□ 0.34
PNKP-225ENST00000636214 FNTAP49354 379 aa17.15■□□□□ 0.34
PNKP-225ENST00000636214 AIMP2Q13155 320 aaKnown RBP17.15■□□□□ 0.34
PNKP-225ENST00000636214 GBX1Q14549 363 aa17.15■□□□□ 0.34
PNKP-225ENST00000636214 ARHGAP19Q14CB8 494 aa17.15■□□□□ 0.34
PNKP-225ENST00000636214 INPP5JQ15735 1006 aaPredicted RBP17.15■□□□□ 0.34
PNKP-225ENST00000636214 MUM1Q2TAK8 710 aa17.15■□□□□ 0.34
PNKP-225ENST00000636214 SLC6A19Q695T7 634 aa17.15■□□□□ 0.34
PNKP-225ENST00000636214 NEK10Q6ZWH5 1172 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms