RNA–Protein interactions for RNA: ENST00000635293.1

TP53-228, Transcript of tumor protein p53, humanhuman

TSL 5

Gene TP53, Length 1,883 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-228ENST00000635293 GLB1L3Q8NCI6 653 aaPredicted RBP11.29□□□□□ -0.6
TP53-228ENST00000635293 PHC3Q8NDX5 983 aa11.29□□□□□ -0.6
TP53-228ENST00000635293 OR5K2Q8NHB8 316 aa11.29□□□□□ -0.6
TP53-228ENST00000635293 TFGQ92734 400 aaPredicted RBP11.29□□□□□ -0.6
TP53-228ENST00000635293 CCDC124Q96CT7 223 aaKnown RBP11.29□□□□□ -0.6
TP53-228ENST00000635293 REPS1Q96D71 796 aa11.29□□□□□ -0.6
TP53-228ENST00000635293 CMTM7Q96FZ5 175 aa11.29□□□□□ -0.6
TP53-228ENST00000635293 SCARF2Q96GP6 870 aaPredicted RBP11.29□□□□□ -0.6
TP53-228ENST00000635293 OR4K3Q96R72 315 aa11.29□□□□□ -0.6
TP53-228ENST00000635293 CDRT15Q96T59 188 aa11.29□□□□□ -0.6
TP53-228ENST00000635293 HOPXQ9BPY8 73 aaPredicted RBP11.29□□□□□ -0.6
TP53-228ENST00000635293 S100A14Q9HCY8 104 aa11.29□□□□□ -0.6
TP53-228ENST00000635293 SLC52A3Q9NQ40 469 aa11.29□□□□□ -0.6
TP53-228ENST00000635293 CCDC177Q9NQR7 707 aaPredicted RBP11.29□□□□□ -0.6
TP53-228ENST00000635293 FARSBQ9NSD9 589 aaKnown RBP11.29□□□□□ -0.6
TP53-228ENST00000635293 SUCOQ9UBS9 1254 aaKnown RBP11.29□□□□□ -0.6
TP53-228ENST00000635293 SLC23A2Q9UGH3 650 aa11.29□□□□□ -0.6
TP53-228ENST00000635293 ZNHIT2Q9UHR6 403 aa11.29□□□□□ -0.6
TP53-228ENST00000635293 PRKAB1Q9Y478 270 aa11.29□□□□□ -0.6
TP53-228ENST00000635293 RANBP2P49792 3224 aaKnown RBP11.29□□□□□ -0.6
TP53-228ENST00000635293 CCDC154A6NI56 674 aa11.28□□□□□ -0.6
TP53-228ENST00000635293 E7EQ34 232 aa11.28□□□□□ -0.6
TP53-228ENST00000635293 ANKRD28O15084 1053 aa11.28□□□□□ -0.6
TP53-228ENST00000635293 PRAMEF4O60810 478 aa11.28□□□□□ -0.6
TP53-228ENST00000635293 NPPAP01160 153 aa11.28□□□□□ -0.6
TP53-228ENST00000635293 IGLV3-19P01714 112 aa11.28□□□□□ -0.6
TP53-228ENST00000635293 CEACAM5P06731 702 aa11.28□□□□□ -0.6
TP53-228ENST00000635293 G6PDP11413 515 aa11.28□□□□□ -0.6
TP53-228ENST00000635293 PRPS2P11908 318 aa11.28□□□□□ -0.6
TP53-228ENST00000635293 GABRG2P18507 467 aa11.28□□□□□ -0.6
TP53-228ENST00000635293 ME2P23368 584 aa11.28□□□□□ -0.6
TP53-228ENST00000635293 THOP1P52888 689 aa11.28□□□□□ -0.6
TP53-228ENST00000635293 UFM1P61960 85 aa11.28□□□□□ -0.6
TP53-228ENST00000635293 HMGCS1Q01581 520 aa11.28□□□□□ -0.6
TP53-228ENST00000635293 DOC2AQ14183 400 aa11.28□□□□□ -0.6
TP53-228ENST00000635293 SKIV2LQ15477 1246 aaKnown RBP11.28□□□□□ -0.6
TP53-228ENST00000635293 LEXMQ3ZCV2 418 aa11.28□□□□□ -0.6
TP53-228ENST00000635293 RFTN2Q52LD8 501 aaPredicted RBP11.28□□□□□ -0.6
TP53-228ENST00000635293 SGO1Q5FBB7 561 aa11.28□□□□□ -0.6
TP53-228ENST00000635293 SAMD4BQ5PRF9 694 aaKnown RBP11.28□□□□□ -0.6
TP53-228ENST00000635293 IER5LQ5T953 404 aa11.28□□□□□ -0.6
TP53-228ENST00000635293 PRAMEF9Q5VWM5 478 aa11.28□□□□□ -0.6
TP53-228ENST00000635293 PRR23BQ6ZRT6 265 aa11.28□□□□□ -0.6
TP53-228ENST00000635293 LPCAT2Q7L5N7 544 aa11.28□□□□□ -0.6
TP53-228ENST00000635293 RETREG3Q86VR2 466 aa11.28□□□□□ -0.6
TP53-228ENST00000635293 LRRC56Q8IYG6 542 aaPredicted RBP11.28□□□□□ -0.6
TP53-228ENST00000635293 SYNPOQ8N3V7 929 aa11.28□□□□□ -0.6
TP53-228ENST00000635293 PROKR1Q8TCW9 393 aa11.28□□□□□ -0.6
TP53-228ENST00000635293 SETD7Q8WTS6 366 aaKnown RBP11.28□□□□□ -0.6
TP53-228ENST00000635293 EFCAB11Q9BUY7 163 aa11.28□□□□□ -0.6
TP53-228ENST00000635293 BTBD1Q9H0C5 482 aa11.28□□□□□ -0.6
TP53-228ENST00000635293 TRIT1Q9H3H1 467 aaKnown RBP11.28□□□□□ -0.6
TP53-228ENST00000635293 BRF2Q9HAW0 419 aa11.28□□□□□ -0.6
TP53-228ENST00000635293 POLMQ9NP87 494 aaPredicted RBP11.28□□□□□ -0.6
TP53-228ENST00000635293 USP36Q9P275 1121 aaKnown RBP11.28□□□□□ -0.6
TP53-228ENST00000635293 LRCH1Q9Y2L9 728 aa11.28□□□□□ -0.6
TP53-228ENST00000635293 PCDHGA11Q9Y5H2 935 aa11.28□□□□□ -0.6
TP53-228ENST00000635293 PCM1Q15154 2024 aa11.28□□□□□ -0.6
TP53-228ENST00000635293 C15orf38-AP3S2A0A0A6YYH1 394 aa11.27□□□□□ -0.6
TP53-228ENST00000635293 KANSL1LA0AUZ9 987 aa11.27□□□□□ -0.6
TP53-228ENST00000635293 A6NHS1 94 aa11.27□□□□□ -0.6
TP53-228ENST00000635293 PRR19A6NJB7 356 aa11.27□□□□□ -0.6
TP53-228ENST00000635293 E7ENX8 843 aa11.27□□□□□ -0.6
TP53-228ENST00000635293 TOR1BO14657 336 aa11.27□□□□□ -0.6
TP53-228ENST00000635293 FPGTO14772 594 aa11.27□□□□□ -0.6
TP53-228ENST00000635293 CFLARO15519 480 aa11.27□□□□□ -0.6
TP53-228ENST00000635293 PI15O43692 258 aa11.27□□□□□ -0.6
TP53-228ENST00000635293 SEC22BO75396 215 aa11.27□□□□□ -0.6
TP53-228ENST00000635293 ACP5P13686 325 aa11.27□□□□□ -0.6
TP53-228ENST00000635293 CD22P20273 847 aa11.27□□□□□ -0.6
TP53-228ENST00000635293 VARSP26640 1264 aaKnown RBP11.27□□□□□ -0.6
TP53-228ENST00000635293 DPP6P42658 865 aa11.27□□□□□ -0.6
TP53-228ENST00000635293 TPMTP51580 245 aa11.27□□□□□ -0.6
TP53-228ENST00000635293 DGKEP52429 567 aa11.27□□□□□ -0.6
TP53-228ENST00000635293 MRPS35P82673 323 aaKnown RBP11.27□□□□□ -0.6
TP53-228ENST00000635293 CTBSQ01459 385 aa11.27□□□□□ -0.6
TP53-228ENST00000635293 TAP2Q03519 686 aa11.27□□□□□ -0.6
TP53-228ENST00000635293 KLC1Q07866 573 aa11.27□□□□□ -0.6
TP53-228ENST00000635293 LAPTM5Q13571 262 aa11.27□□□□□ -0.6
TP53-228ENST00000635293 CEACAM7Q14002 265 aa11.27□□□□□ -0.6
TP53-228ENST00000635293 LRRC32Q14392 662 aa11.27□□□□□ -0.6
TP53-228ENST00000635293 VPS26BQ4G0F5 336 aa11.27□□□□□ -0.6
TP53-228ENST00000635293 PYCR3Q53H96 274 aa11.27□□□□□ -0.6
TP53-228ENST00000635293 PAGE2BQ5JRK9 111 aa11.27□□□□□ -0.6
TP53-228ENST00000635293 HABP4Q5JVS0 413 aaKnown RBP11.27□□□□□ -0.6
TP53-228ENST00000635293 ATG9BQ674R7 924 aa11.27□□□□□ -0.6
TP53-228ENST00000635293 CAPRIN2Q6IMN6 1127 aaKnown RBP11.27□□□□□ -0.6
TP53-228ENST00000635293 IRGCQ6NXR0 463 aa11.27□□□□□ -0.6
TP53-228ENST00000635293 LCTLQ6UWM7 567 aa11.27□□□□□ -0.6
TP53-228ENST00000635293 SLCO4C1Q6ZQN7 724 aa11.27□□□□□ -0.6
TP53-228ENST00000635293 ARPINQ7Z6K5 226 aa11.27□□□□□ -0.6
TP53-228ENST00000635293 FAM124AQ86V42 546 aa11.27□□□□□ -0.6
TP53-228ENST00000635293 TBC1D21Q8IYX1 336 aa11.27□□□□□ -0.6
TP53-228ENST00000635293 RAB42Q8N4Z0 105 aa11.27□□□□□ -0.6
TP53-228ENST00000635293 MINDY1Q8N5J2 469 aa11.27□□□□□ -0.6
TP53-228ENST00000635293 DPP10Q8N608 796 aa11.27□□□□□ -0.6
TP53-228ENST00000635293 WDR20Q8TBZ3 569 aa11.27□□□□□ -0.6
TP53-228ENST00000635293 HLA-CQ95604 372 aa11.27□□□□□ -0.6
TP53-228ENST00000635293 FCRL1Q96LA6 429 aa11.27□□□□□ -0.6
TP53-228ENST00000635293 GPATCH1Q9BRR8 931 aaKnown RBP11.27□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms