RNA–Protein interactions for RNA: ENST00000629045.1

SCARNA4-201, small Cajal body-specific RNA 4, humanhuman

BASIC

Gene SCARNA4, Length 128 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA4-201ENST00000629045 MC5RP33032 325 aa2.06□□□□□ -2.08
SCARNA4-201ENST00000629045 PTGER4P35408 488 aa2.06□□□□□ -2.08
SCARNA4-201ENST00000629045 MTHFRP42898 656 aa2.06□□□□□ -2.08
SCARNA4-201ENST00000629045 LMAN1P49257 510 aa2.06□□□□□ -2.08
SCARNA4-201ENST00000629045 ZNF75DP51815 510 aa2.06□□□□□ -2.08
SCARNA4-201ENST00000629045 GSDMDP57764 484 aa2.06□□□□□ -2.08
SCARNA4-201ENST00000629045 BECN1Q14457 450 aa2.06□□□□□ -2.08
SCARNA4-201ENST00000629045 TNIP1Q15025 636 aa2.06□□□□□ -2.08
SCARNA4-201ENST00000629045 NECTIN1Q15223 517 aa2.06□□□□□ -2.08
SCARNA4-201ENST00000629045 VWC2Q2TAL6 325 aa2.06□□□□□ -2.08
SCARNA4-201ENST00000629045 HLA-BQ31612 363 aa2.06□□□□□ -2.08
SCARNA4-201ENST00000629045 MCMDC2Q4G0Z9 681 aa2.06□□□□□ -2.08
SCARNA4-201ENST00000629045 CFAP161Q6P656 301 aa2.06□□□□□ -2.08
SCARNA4-201ENST00000629045 SLC25A47Q6Q0C1 308 aa2.06□□□□□ -2.08
SCARNA4-201ENST00000629045 PLPPR4Q7Z2D5 763 aa2.06□□□□□ -2.08
SCARNA4-201ENST00000629045 CENPVQ7Z7K6 275 aaPredicted RBP2.06□□□□□ -2.08
SCARNA4-201ENST00000629045 ADGRA1Q86SQ6 560 aa2.06□□□□□ -2.08
SCARNA4-201ENST00000629045 CATSPERDQ86XM0 798 aa2.06□□□□□ -2.08
SCARNA4-201ENST00000629045 LGI2Q8N0V4 545 aa2.06□□□□□ -2.08
SCARNA4-201ENST00000629045 LSMEM2Q8N112 164 aa2.06□□□□□ -2.08
SCARNA4-201ENST00000629045 BMPERQ8N8U9 685 aa2.06□□□□□ -2.08
SCARNA4-201ENST00000629045 TC2NQ8N9U0 490 aa2.06□□□□□ -2.08
SCARNA4-201ENST00000629045 GOLGA6L2Q8N9W4 650 aaPredicted RBP2.06□□□□□ -2.08
SCARNA4-201ENST00000629045 AVL9Q8NBF6 648 aa2.06□□□□□ -2.08
SCARNA4-201ENST00000629045 SLC4A11Q8NBS3 891 aa2.06□□□□□ -2.08
SCARNA4-201ENST00000629045 ZNF519Q8TB69 540 aa2.06□□□□□ -2.08
SCARNA4-201ENST00000629045 ARHGAP45Q92619 1136 aa2.06□□□□□ -2.08
SCARNA4-201ENST00000629045 C10orf90Q96M02 699 aa2.06□□□□□ -2.08
SCARNA4-201ENST00000629045 NSMCE3Q96MG7 304 aa2.06□□□□□ -2.08
SCARNA4-201ENST00000629045 AGAP3Q96P47 875 aa2.06□□□□□ -2.08
SCARNA4-201ENST00000629045 RBM4BQ9BQ04 359 aaKnown RBP2.06□□□□□ -2.08
SCARNA4-201ENST00000629045 TRIM51Q9BSJ1 452 aa2.06□□□□□ -2.08
SCARNA4-201ENST00000629045 CENPOQ9BU64 300 aa2.06□□□□□ -2.08
SCARNA4-201ENST00000629045 GPR88Q9GZN0 384 aa2.06□□□□□ -2.08
SCARNA4-201ENST00000629045 PPANQ9NQ55 473 aaKnown RBP2.06□□□□□ -2.08
SCARNA4-201ENST00000629045 MAN2C1Q9NTJ4 1040 aa2.06□□□□□ -2.08
SCARNA4-201ENST00000629045 OR6C2Q9NZP2 312 aa2.06□□□□□ -2.08
SCARNA4-201ENST00000629045 ANAPC2Q9UJX6 822 aa2.06□□□□□ -2.08
SCARNA4-201ENST00000629045 WDR83OSQ9Y284 106 aa2.06□□□□□ -2.08
SCARNA4-201ENST00000629045 TRIM17Q9Y577 477 aa2.06□□□□□ -2.08
SCARNA4-201ENST00000629045 ABCA7Q8IZY2 2146 aa2.06□□□□□ -2.08
SCARNA4-201ENST00000629045 EDDM13A0A1B0GTR0 161 aa2.05□□□□□ -2.08
SCARNA4-201ENST00000629045 A0A1W2PPK0 400 aa2.05□□□□□ -2.08
SCARNA4-201ENST00000629045 A0A1W2PPQ1 181 aa2.05□□□□□ -2.08
SCARNA4-201ENST00000629045 TRBC2A0A5B9 178 aa2.05□□□□□ -2.08
SCARNA4-201ENST00000629045 NEMP2A6NFY4 417 aa2.05□□□□□ -2.08
SCARNA4-201ENST00000629045 C15orf61A6NNL5 157 aa2.05□□□□□ -2.08
SCARNA4-201ENST00000629045 SNURFLB1AK76 121 aa2.05□□□□□ -2.08
SCARNA4-201ENST00000629045 CCL24O00175 119 aa2.05□□□□□ -2.08
SCARNA4-201ENST00000629045 ARPC2O15144 300 aa2.05□□□□□ -2.08
SCARNA4-201ENST00000629045 GLRA3O75311 464 aa2.05□□□□□ -2.08
SCARNA4-201ENST00000629045 TADA2AO75478 443 aa2.05□□□□□ -2.08
SCARNA4-201ENST00000629045 CDK2AP2O75956 126 aa2.05□□□□□ -2.08
SCARNA4-201ENST00000629045 SLC2A2P11168 524 aaPredicted RBP2.05□□□□□ -2.08
SCARNA4-201ENST00000629045 AKR1B1P15121 316 aa2.05□□□□□ -2.08
SCARNA4-201ENST00000629045 ZNF10P21506 573 aaPredicted RBP2.05□□□□□ -2.08
SCARNA4-201ENST00000629045 CSTF2P33240 577 aaKnown RBP eCLIP2.05□□□□□ -2.08
SCARNA4-201ENST00000629045 CCR10P46092 362 aa2.05□□□□□ -2.08
SCARNA4-201ENST00000629045 LHX1P48742 406 aa2.05□□□□□ -2.08
SCARNA4-201ENST00000629045 CCR3P51677 355 aa2.05□□□□□ -2.08
SCARNA4-201ENST00000629045 DSCR10P59022 87 aa2.05□□□□□ -2.08
SCARNA4-201ENST00000629045 HERV-K104P61576 105 aa2.05□□□□□ -2.08
SCARNA4-201ENST00000629045 GUCY2DQ02846 1103 aa2.05□□□□□ -2.08
SCARNA4-201ENST00000629045 RALGDSQ12967 914 aa2.05□□□□□ -2.08
SCARNA4-201ENST00000629045 SNTB1Q13884 538 aaKnown RBP2.05□□□□□ -2.08
SCARNA4-201ENST00000629045 VEZF1Q14119 521 aa2.05□□□□□ -2.08
SCARNA4-201ENST00000629045 RALBP1Q15311 655 aa2.05□□□□□ -2.08
SCARNA4-201ENST00000629045 SLC1A5Q15758 541 aa2.05□□□□□ -2.08
SCARNA4-201ENST00000629045 EXT1Q16394 746 aa2.05□□□□□ -2.08
SCARNA4-201ENST00000629045 CTU2Q2VPK5 515 aaKnown RBP2.05□□□□□ -2.08
SCARNA4-201ENST00000629045 SNAI3Q3KNW1 292 aa2.05□□□□□ -2.08
SCARNA4-201ENST00000629045 FASTKD1Q53R41 847 aaKnown RBP2.05□□□□□ -2.08
SCARNA4-201ENST00000629045 SLC35D3Q5M8T2 416 aa2.05□□□□□ -2.08
SCARNA4-201ENST00000629045 LCN1P1Q5VSP4 162 aa2.05□□□□□ -2.08
SCARNA4-201ENST00000629045 PRR27Q6MZM9 219 aa2.05□□□□□ -2.08
SCARNA4-201ENST00000629045 UGT3A1Q6NUS8 523 aa2.05□□□□□ -2.08
SCARNA4-201ENST00000629045 NUDT13Q86X67 352 aa2.05□□□□□ -2.08
SCARNA4-201ENST00000629045 OR4K1Q8NGD4 311 aa2.05□□□□□ -2.08
SCARNA4-201ENST00000629045 OR10G8Q8NGN5 311 aa2.05□□□□□ -2.08
SCARNA4-201ENST00000629045 OR6S1Q8NH40 331 aa2.05□□□□□ -2.08
SCARNA4-201ENST00000629045 GATAD1Q8WUU5 269 aa2.05□□□□□ -2.08
SCARNA4-201ENST00000629045 APOBEC4Q8WW27 367 aaKnown RBP2.05□□□□□ -2.08
SCARNA4-201ENST00000629045 ZNRF4Q8WWF5 429 aa2.05□□□□□ -2.08
SCARNA4-201ENST00000629045 OMA1Q96E52 524 aa2.05□□□□□ -2.08
SCARNA4-201ENST00000629045 OTUB1Q96FW1 271 aaPredicted RBP2.05□□□□□ -2.08
SCARNA4-201ENST00000629045 FAM71F1Q96KD3 344 aaPredicted RBP2.05□□□□□ -2.08
SCARNA4-201ENST00000629045 C4orf45Q96LM5 186 aa2.05□□□□□ -2.08
SCARNA4-201ENST00000629045 USP28Q96RU2 1077 aa2.05□□□□□ -2.08
SCARNA4-201ENST00000629045 NUDT16L1Q9BRJ7 211 aaKnown RBP2.05□□□□□ -2.08
SCARNA4-201ENST00000629045 UBXN6Q9BZV1 441 aa2.05□□□□□ -2.08
SCARNA4-201ENST00000629045 UPF3AQ9H1J1 476 aaKnown RBP2.05□□□□□ -2.08
SCARNA4-201ENST00000629045 TLE6Q9H808 572 aa2.05□□□□□ -2.08
SCARNA4-201ENST00000629045 NOL11Q9H8H0 719 aaKnown RBP2.05□□□□□ -2.08
SCARNA4-201ENST00000629045 Q9H8V8 135 aa2.05□□□□□ -2.08
SCARNA4-201ENST00000629045 STK26Q9P289 416 aa2.05□□□□□ -2.08
SCARNA4-201ENST00000629045 DDX25Q9UHL0 483 aaKnown RBP2.05□□□□□ -2.08
SCARNA4-201ENST00000629045 CPSF3Q9UKF6 684 aaKnown RBP2.05□□□□□ -2.08
SCARNA4-201ENST00000629045 R4GN57 208 aa2.05□□□□□ -2.08
SCARNA4-201ENST00000629045 E9PQ18 207 aa2.04□□□□□ -2.08
SCARNA4-201ENST00000629045 PTGESO14684 152 aa2.04□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms