RNA–Protein interactions for RNA: ENST00000626028.1

SF1-220, Transcript of splicing factor 1, humanhuman

TSL 2 BASIC

Gene SF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-220ENST00000626028 PADI2Q9Y2J8 665 aa21.48■■□□□ 1.03
SF1-220ENST00000626028 KCNMB2Q9Y691 235 aa21.48■■□□□ 1.03
SF1-220ENST00000626028 ZNF462Q96JM2 2506 aa21.47■■□□□ 1.03
SF1-220ENST00000626028 A0A1W2PPV9 198 aa21.47■■□□□ 1.03
SF1-220ENST00000626028 B8ZZF3 427 aa21.47■■□□□ 1.03
SF1-220ENST00000626028 C9J4A7 227 aa21.47■■□□□ 1.03
SF1-220ENST00000626028 CCNDBP1O95273 360 aa21.47■■□□□ 1.03
SF1-220ENST00000626028 CMPK1P30085 196 aa21.47■■□□□ 1.03
SF1-220ENST00000626028 GRIA3P42263 894 aa21.47■■□□□ 1.03
SF1-220ENST00000626028 RPL21P46778 160 aaKnown RBP21.47■■□□□ 1.03
SF1-220ENST00000626028 CARSP49589 748 aaKnown RBP21.47■■□□□ 1.03
SF1-220ENST00000626028 KCNAB2Q13303 367 aa21.47■■□□□ 1.03
SF1-220ENST00000626028 ERV3-1Q14264 604 aa21.47■■□□□ 1.03
SF1-220ENST00000626028 SYT10Q6XYQ8 523 aa21.47■■□□□ 1.03
SF1-220ENST00000626028 CYHR1Q6ZMK1 362 aa21.47■■□□□ 1.03
SF1-220ENST00000626028 C2orf73Q8N5S3 287 aaPredicted RBP21.47■■□□□ 1.03
SF1-220ENST00000626028 TRIM31Q9BZY9 425 aa21.47■■□□□ 1.03
SF1-220ENST00000626028 SLC25A18Q9H1K4 315 aa21.47■■□□□ 1.03
SF1-220ENST00000626028 PLAC1Q9HBJ0 212 aa21.47■■□□□ 1.03
SF1-220ENST00000626028 UTP6Q9NYH9 597 aaKnown RBP21.47■■□□□ 1.03
SF1-220ENST00000626028 CHMP2BQ9UQN3 213 aa21.47■■□□□ 1.03
SF1-220ENST00000626028 MED13Q9UHV7 2174 aa21.46■■□□□ 1.03
SF1-220ENST00000626028 NUP210LQ5VU65 1888 aa21.46■■□□□ 1.03
SF1-220ENST00000626028 EIF3HO15372 352 aaKnown RBP eCLIP21.46■■□□□ 1.03
SF1-220ENST00000626028 HCRTR1O43613 425 aa21.46■■□□□ 1.03
SF1-220ENST00000626028 C8GP07360 202 aa21.46■■□□□ 1.03
SF1-220ENST00000626028 GABRB3P28472 473 aa21.46■■□□□ 1.03
SF1-220ENST00000626028 PNLIPRP1P54315 467 aa21.46■■□□□ 1.03
SF1-220ENST00000626028 RELAQ04206 551 aa21.46■■□□□ 1.03
SF1-220ENST00000626028 PDIA2Q13087 525 aaKnown RBP21.46■■□□□ 1.03
SF1-220ENST00000626028 SP140Q13342 867 aa21.46■■□□□ 1.03
SF1-220ENST00000626028 CUL1Q13616 776 aa21.46■■□□□ 1.03
SF1-220ENST00000626028 NCF4Q15080 339 aa21.46■■□□□ 1.03
SF1-220ENST00000626028 DEFB110Q30KQ9 67 aa21.46■■□□□ 1.03
SF1-220ENST00000626028 DEFB109BQ30KR1 87 aa21.46■■□□□ 1.03
SF1-220ENST00000626028 FCRL6Q6DN72 434 aa21.46■■□□□ 1.03
SF1-220ENST00000626028 TAX1BP1Q86VP1 789 aa21.46■■□□□ 1.03
SF1-220ENST00000626028 APLFQ8IW19 511 aaPredicted RBP21.46■■□□□ 1.03
SF1-220ENST00000626028 RNF31Q96EP0 1072 aa21.46■■□□□ 1.03
SF1-220ENST00000626028 WDR83Q9BRX9 315 aaKnown RBP21.46■■□□□ 1.03
SF1-220ENST00000626028 PHACTR1Q9C0D0 580 aa21.46■■□□□ 1.03
SF1-220ENST00000626028 SPRTNQ9H040 489 aaPredicted RBP21.46■■□□□ 1.03
SF1-220ENST00000626028 TXLNGQ9NUQ3 528 aa21.46■■□□□ 1.03
SF1-220ENST00000626028 NSMCE4AQ9NXX6 385 aa21.46■■□□□ 1.03
SF1-220ENST00000626028 TCFL5Q9UL49 500 aa21.46■■□□□ 1.03
SF1-220ENST00000626028 SNX7Q9UNH6 387 aa21.46■■□□□ 1.03
SF1-220ENST00000626028 HELZ2Q9BYK8 2649 aaKnown RBP21.45■■□□□ 1.02
SF1-220ENST00000626028 FITM1A5D6W6 292 aa21.45■■□□□ 1.02
SF1-220ENST00000626028 SLC16A5O15375 505 aa21.45■■□□□ 1.02
SF1-220ENST00000626028 SLC16A8O95907 504 aa21.45■■□□□ 1.02
SF1-220ENST00000626028 CAPN1P07384 714 aa21.45■■□□□ 1.02
SF1-220ENST00000626028 RPA3P35244 121 aaPredicted RBP21.45■■□□□ 1.02
SF1-220ENST00000626028 GCGRP47871 477 aa21.45■■□□□ 1.02
SF1-220ENST00000626028 DCDP81605 110 aaKnown RBP21.45■■□□□ 1.02
SF1-220ENST00000626028 CAV1Q03135 178 aa21.45■■□□□ 1.02
SF1-220ENST00000626028 GRM7Q14831 915 aa21.45■■□□□ 1.02
SF1-220ENST00000626028 FAM198BQ6UWH4 519 aa21.45■■□□□ 1.02
SF1-220ENST00000626028 ZNF605Q86T29 641 aa21.45■■□□□ 1.02
SF1-220ENST00000626028 SLC26A11Q86WA9 606 aa21.45■■□□□ 1.02
SF1-220ENST00000626028 PALM2Q8IXS6 379 aa21.45■■□□□ 1.02
SF1-220ENST00000626028 CPNE9Q8IYJ1 553 aa21.45■■□□□ 1.02
SF1-220ENST00000626028 ZNF655Q8N720 491 aaPredicted RBP21.45■■□□□ 1.02
SF1-220ENST00000626028 MCOLN3Q8TDD5 553 aa21.45■■□□□ 1.02
SF1-220ENST00000626028 CFAP36Q96G28 342 aa21.45■■□□□ 1.02
SF1-220ENST00000626028 GBP5Q96PP8 586 aa21.45■■□□□ 1.02
SF1-220ENST00000626028 PKP4Q99569 1192 aa21.45■■□□□ 1.02
SF1-220ENST00000626028 MIPEPQ99797 713 aa21.45■■□□□ 1.02
SF1-220ENST00000626028 RAB17Q9H0T7 212 aa21.45■■□□□ 1.02
SF1-220ENST00000626028 MOCS1Q9NZB8 636 aa21.45■■□□□ 1.02
SF1-220ENST00000626028 SNX24Q9Y343 169 aa21.45■■□□□ 1.02
SF1-220ENST00000626028 UTP11Q9Y3A2 253 aaKnown RBP21.45■■□□□ 1.02
SF1-220ENST00000626028 CDC14CA4D256 554 aa21.44■■□□□ 1.02
SF1-220ENST00000626028 OR2A25A4D2G3 310 aa21.44■■□□□ 1.02
SF1-220ENST00000626028 ONECUT2O95948 504 aa21.44■■□□□ 1.02
SF1-220ENST00000626028 FURINP09958 794 aa21.44■■□□□ 1.02
SF1-220ENST00000626028 PMS2P54278 862 aa21.44■■□□□ 1.02
SF1-220ENST00000626028 ABATP80404 500 aa21.44■■□□□ 1.02
SF1-220ENST00000626028 TIAL1Q01085 375 aaKnown RBP eCLIP21.44■■□□□ 1.021e-7■□□□□ 9.3
SF1-220ENST00000626028 PRDX1Q06830 199 aaKnown RBP21.44■■□□□ 1.02
SF1-220ENST00000626028 MGAT5Q09328 741 aa21.44■■□□□ 1.02
SF1-220ENST00000626028 COL9A2Q14055 689 aaPredicted RBP21.44■■□□□ 1.02
SF1-220ENST00000626028 FAM214AQ32MH5 1076 aa21.44■■□□□ 1.02
SF1-220ENST00000626028 FAM45BPQ6NSW5 357 aa21.44■■□□□ 1.02
SF1-220ENST00000626028 UBE2R2Q712K3 238 aaPredicted RBP21.44■■□□□ 1.02
SF1-220ENST00000626028 FAM20CQ8IXL6 584 aa21.44■■□□□ 1.02
SF1-220ENST00000626028 ENDOVQ8N8Q3 282 aaKnown RBP21.44■■□□□ 1.02
SF1-220ENST00000626028 FAM45AQ8TCE6 357 aa21.44■■□□□ 1.02
SF1-220ENST00000626028 ZNF480Q8WV37 535 aa21.44■■□□□ 1.02
SF1-220ENST00000626028 PWWP2AQ96N64 755 aa21.44■■□□□ 1.02
SF1-220ENST00000626028 IP6K3Q96PC2 410 aa21.44■■□□□ 1.02
SF1-220ENST00000626028 NDNQ99608 321 aa21.44■■□□□ 1.02
SF1-220ENST00000626028 SELENOSQ9BQE4 189 aa21.44■■□□□ 1.02
SF1-220ENST00000626028 IRAK4Q9NWZ3 460 aa21.44■■□□□ 1.02
SF1-220ENST00000626028 ZFATQ9P243 1243 aa21.44■■□□□ 1.02
SF1-220ENST00000626028 TSR3Q9UJK0 312 aaKnown RBP21.44■■□□□ 1.02
SF1-220ENST00000626028 MAN2B2Q9Y2E5 1009 aa21.44■■□□□ 1.02
SF1-220ENST00000626028 BAHCC1Q9P281 2608 aa21.44■■□□□ 1.02
SF1-220ENST00000626028 GCN1Q92616 2671 aaKnown RBP21.43■■□□□ 1.02
SF1-220ENST00000626028 E7ENX8 843 aa21.43■■□□□ 1.02
SF1-220ENST00000626028 PIM1P11309 404 aaPredicted RBP21.43■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms