RNA–Protein interactions for RNA: ENST00000624887.1

PCDHB11-202, Transcript of protocadherin beta 11, humanhuman

TSL 2 BASIC

Gene PCDHB11, Length 1,973 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-202ENST00000624887 OR56A3Q8NH54 315 aa19.13■□□□□ 0.65
PCDHB11-202ENST00000624887 WDR20Q8TBZ3 569 aa19.13■□□□□ 0.65
PCDHB11-202ENST00000624887 FCRL1Q96LA6 429 aa19.13■□□□□ 0.65
PCDHB11-202ENST00000624887 PKP4Q99569 1192 aa19.13■□□□□ 0.65
PCDHB11-202ENST00000624887 NKX2-4Q9H2Z4 354 aa19.13■□□□□ 0.65
PCDHB11-202ENST00000624887 MAN2B2Q9Y2E5 1009 aa19.13■□□□□ 0.65
PCDHB11-202ENST00000624887 KIF26AQ9ULI4 1882 aaPredicted RBP19.13■□□□□ 0.65
PCDHB11-202ENST00000624887 E7EQ34 232 aa19.13■□□□□ 0.65
PCDHB11-202ENST00000624887 H3BM21 787 aa19.13■□□□□ 0.65
PCDHB11-202ENST00000624887 PLK4O00444 970 aa19.13■□□□□ 0.65
PCDHB11-202ENST00000624887 MMP20O60882 483 aa19.13■□□□□ 0.65
PCDHB11-202ENST00000624887 ERN1O75460 977 aaKnown RBP19.13■□□□□ 0.65
PCDHB11-202ENST00000624887 TNFAIP8O95379 198 aa19.13■□□□□ 0.65
PCDHB11-202ENST00000624887 SLC16A8O95907 504 aa19.13■□□□□ 0.65
PCDHB11-202ENST00000624887 FAM58BPP0C7Q3 252 aa19.13■□□□□ 0.65
PCDHB11-202ENST00000624887 S100A3P33764 101 aa19.13■□□□□ 0.65
PCDHB11-202ENST00000624887 GPR1P46091 355 aa19.13■□□□□ 0.65
PCDHB11-202ENST00000624887 MYBPC1Q00872 1141 aa19.13■□□□□ 0.65
PCDHB11-202ENST00000624887 DOC2AQ14183 400 aa19.13■□□□□ 0.65
PCDHB11-202ENST00000624887 TMEM52BQ4KMG9 183 aa19.13■□□□□ 0.65
PCDHB11-202ENST00000624887 RAET1GQ6H3X3 334 aa19.13■□□□□ 0.65
PCDHB11-202ENST00000624887 NOXRED1Q6NXP6 359 aa19.13■□□□□ 0.65
PCDHB11-202ENST00000624887 TRIM74Q86UV6 250 aa19.13■□□□□ 0.65
PCDHB11-202ENST00000624887 FBXO15Q8NCQ5 510 aaPredicted RBP19.13■□□□□ 0.65
PCDHB11-202ENST00000624887 OR2T12Q8NG77 320 aa19.13■□□□□ 0.65
PCDHB11-202ENST00000624887 CSGALNACT1Q8TDX6 532 aa19.13■□□□□ 0.65
PCDHB11-202ENST00000624887 MED8Q96G25 268 aa19.13■□□□□ 0.65
PCDHB11-202ENST00000624887 APOLD1Q96LR9 279 aa19.13■□□□□ 0.65
PCDHB11-202ENST00000624887 TSSK3Q96PN8 268 aa19.13■□□□□ 0.65
PCDHB11-202ENST00000624887 HHIPQ96QV1 700 aa19.13■□□□□ 0.65
PCDHB11-202ENST00000624887 OR4K3Q96R72 315 aa19.13■□□□□ 0.65
PCDHB11-202ENST00000624887 C9orf16Q9BUW7 83 aa19.13■□□□□ 0.65
PCDHB11-202ENST00000624887 THUMPD3Q9BV44 507 aaKnown RBP19.13■□□□□ 0.65
PCDHB11-202ENST00000624887 PAIP1Q9H074 479 aaKnown RBP19.13■□□□□ 0.65
PCDHB11-202ENST00000624887 LMAN2LQ9H0V9 348 aa19.13■□□□□ 0.65
PCDHB11-202ENST00000624887 KCNH6Q9H252 994 aa19.13■□□□□ 0.65
PCDHB11-202ENST00000624887 DYRK4Q9NR20 520 aa19.13■□□□□ 0.65
PCDHB11-202ENST00000624887 DENND4AQ7Z401 1863 aa19.13■□□□□ 0.65
PCDHB11-202ENST00000624887 TRANK1O15050 2925 aa19.12■□□□□ 0.65
PCDHB11-202ENST00000624887 ARHGAP10A1A4S6 786 aa19.12■□□□□ 0.65
PCDHB11-202ENST00000624887 CCDC85CA6NKD9 419 aa19.12■□□□□ 0.65
PCDHB11-202ENST00000624887 H0YIV9 168 aa19.12■□□□□ 0.65
PCDHB11-202ENST00000624887 MAP3K13O43283 966 aa19.12■□□□□ 0.65
PCDHB11-202ENST00000624887 LZTS3O60299 673 aaPredicted RBP19.12■□□□□ 0.65
PCDHB11-202ENST00000624887 ANXA6P08133 673 aa19.12■□□□□ 0.65
PCDHB11-202ENST00000624887 HNF4AP41235 474 aa19.12■□□□□ 0.65
PCDHB11-202ENST00000624887 NHSL2Q5HYW2 709 aa19.12■□□□□ 0.65
PCDHB11-202ENST00000624887 LRIF1Q5T3J3 769 aa19.12■□□□□ 0.65
PCDHB11-202ENST00000624887 PPP2R2DQ66LE6 453 aa19.12■□□□□ 0.65
PCDHB11-202ENST00000624887 GRHL2Q6ISB3 625 aa19.12■□□□□ 0.65
PCDHB11-202ENST00000624887 ERN2Q76MJ5 926 aaKnown RBP19.12■□□□□ 0.65
PCDHB11-202ENST00000624887 RIMKLAQ8IXN7 391 aa19.12■□□□□ 0.65
PCDHB11-202ENST00000624887 CBR4Q8N4T8 237 aa19.12■□□□□ 0.65
PCDHB11-202ENST00000624887 MFSD2AQ8NA29 543 aa19.12■□□□□ 0.65
PCDHB11-202ENST00000624887 ZNF548Q8NEK5 533 aaPredicted RBP19.12■□□□□ 0.65
PCDHB11-202ENST00000624887 TNIP2Q8NFZ5 429 aa19.12■□□□□ 0.65
PCDHB11-202ENST00000624887 OSBPL6Q9BZF3 934 aa19.12■□□□□ 0.65
PCDHB11-202ENST00000624887 OR2AG1Q9H205 316 aa19.12■□□□□ 0.65
PCDHB11-202ENST00000624887 IKZF5Q9H5V7 419 aa19.12■□□□□ 0.65
PCDHB11-202ENST00000624887 ZNF696Q9H7X3 374 aa19.12■□□□□ 0.65
PCDHB11-202ENST00000624887 GORASP2Q9H8Y8 452 aa19.12■□□□□ 0.65
PCDHB11-202ENST00000624887 SERHLQ9NQF3 203 aa19.12■□□□□ 0.65
PCDHB11-202ENST00000624887 C8orf4Q9NR00 106 aa19.12■□□□□ 0.65
PCDHB11-202ENST00000624887 MSRAQ9UJ68 235 aa19.12■□□□□ 0.65
PCDHB11-202ENST00000624887 COL4A3Q01955 1670 aa19.12■□□□□ 0.65
PCDHB11-202ENST00000624887 A0A096LPI6 279 aa19.12■□□□□ 0.65
PCDHB11-202ENST00000624887 TBC1D3BA6NDS4 549 aa19.12■□□□□ 0.65
PCDHB11-202ENST00000624887 C1orf105O95561 183 aa19.12■□□□□ 0.65
PCDHB11-202ENST00000624887 SMIM18P0DKX4 95 aa19.12■□□□□ 0.65
PCDHB11-202ENST00000624887 CDH1P12830 882 aa19.12■□□□□ 0.65
PCDHB11-202ENST00000624887 GRIA2P42262 883 aa19.12■□□□□ 0.65
PCDHB11-202ENST00000624887 POLE2P56282 527 aa19.12■□□□□ 0.65
PCDHB11-202ENST00000624887 ATP6AP1Q15904 470 aa19.12■□□□□ 0.65
PCDHB11-202ENST00000624887 TANGO2Q6ICL3 276 aa19.12■□□□□ 0.65
PCDHB11-202ENST00000624887 DNAJC14Q6Y2X3 702 aaPredicted RBP19.12■□□□□ 0.65
PCDHB11-202ENST00000624887 CARM1Q86X55 608 aa19.12■□□□□ 0.65
PCDHB11-202ENST00000624887 TRAPPC5Q8IUR0 188 aa19.12■□□□□ 0.65
PCDHB11-202ENST00000624887 RNF175Q8N4F7 328 aa19.12■□□□□ 0.65
PCDHB11-202ENST00000624887 OR10A6Q8NH74 314 aa19.12■□□□□ 0.65
PCDHB11-202ENST00000624887 RMND5AQ9H871 391 aa19.12■□□□□ 0.65
PCDHB11-202ENST00000624887 TRIM39Q9HCM9 518 aa19.12■□□□□ 0.65
PCDHB11-202ENST00000624887 SPATA6Q9NWH7 488 aaPredicted RBP19.12■□□□□ 0.65
PCDHB11-202ENST00000624887 VPS29Q9UBQ0 182 aa19.12■□□□□ 0.65
PCDHB11-202ENST00000624887 PPT2Q9UMR5 302 aa19.12■□□□□ 0.65
PCDHB11-202ENST00000624887 PCDHB14Q9Y5E9 798 aa19.12■□□□□ 0.65
PCDHB11-202ENST00000624887 GMNNO75496 209 aa19.11■□□□□ 0.65
PCDHB11-202ENST00000624887 OPRD1P41143 372 aa19.11■□□□□ 0.65
PCDHB11-202ENST00000624887 CCR3P51677 355 aa19.11■□□□□ 0.65
PCDHB11-202ENST00000624887 RAB30Q15771 203 aa19.11■□□□□ 0.65
PCDHB11-202ENST00000624887 LIN52Q52LA3 116 aa19.11■□□□□ 0.65
PCDHB11-202ENST00000624887 TMTC4Q5T4D3 741 aa19.11■□□□□ 0.65
PCDHB11-202ENST00000624887 SPRED1Q7Z699 444 aa19.11■□□□□ 0.65
PCDHB11-202ENST00000624887 DSG4Q86SJ6 1040 aa19.11■□□□□ 0.65
PCDHB11-202ENST00000624887 MMAAQ8IVH4 418 aaKnown RBP19.11■□□□□ 0.65
PCDHB11-202ENST00000624887 CFAP206Q8IYR0 622 aa19.11■□□□□ 0.65
PCDHB11-202ENST00000624887 ZFAND2BQ8WV99 257 aa19.11■□□□□ 0.65
PCDHB11-202ENST00000624887 SUSD6Q92537 303 aa19.11■□□□□ 0.65
PCDHB11-202ENST00000624887 ITCHQ96J02 903 aa19.11■□□□□ 0.65
PCDHB11-202ENST00000624887 ZNF514Q96K75 400 aaPredicted RBP19.11■□□□□ 0.65
PCDHB11-202ENST00000624887 LINC00615Q96LM1 132 aaPredicted RBP19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms