RNA–Protein interactions for RNA: ENST00000624204.3

PMS1-221, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 3,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-221ENST00000624204 NXF2Q9GZY0 626 aaKnown RBP14.8□□□□□ -0.04
PMS1-221ENST00000624204 AASDHPPTQ9NRN7 309 aa14.8□□□□□ -0.04
PMS1-221ENST00000624204 HEBP1Q9NRV9 189 aa14.8□□□□□ -0.04
PMS1-221ENST00000624204 ZNF490Q9ULM2 529 aaPredicted RBP14.8□□□□□ -0.04
PMS1-221ENST00000624204 GPR39O43194 453 aa14.8□□□□□ -0.04
PMS1-221ENST00000624204 MAGEA11P43364 429 aa14.8□□□□□ -0.04
PMS1-221ENST00000624204 SOX4Q06945 474 aaPredicted RBP14.8□□□□□ -0.04
PMS1-221ENST00000624204 TIGD7Q6NT04 549 aaPredicted RBP14.8□□□□□ -0.04
PMS1-221ENST00000624204 TMPRSS11AQ6ZMR5 421 aa14.8□□□□□ -0.04
PMS1-221ENST00000624204 GPSM1Q86YR5 675 aa14.8□□□□□ -0.04
PMS1-221ENST00000624204 CAMKK1Q8N5S9 505 aa14.8□□□□□ -0.04
PMS1-221ENST00000624204 SMAD5Q99717 465 aaKnown RBP14.8□□□□□ -0.04
PMS1-221ENST00000624204 TMEM39AQ9NV64 488 aa14.8□□□□□ -0.04
PMS1-221ENST00000624204 MIOSQ9NXC5 875 aa14.8□□□□□ -0.04
PMS1-221ENST00000624204 FBXO9Q9UK97 447 aaPredicted RBP14.8□□□□□ -0.04
PMS1-221ENST00000624204 PRKAB1Q9Y478 270 aa14.8□□□□□ -0.04
PMS1-221ENST00000624204 PCDHB5Q9Y5E4 795 aa14.8□□□□□ -0.04
PMS1-221ENST00000624204 IQCF5A8MTL0 148 aa14.8□□□□□ -0.04
PMS1-221ENST00000624204 J3KR12 359 aa14.8□□□□□ -0.04
PMS1-221ENST00000624204 SEC22BO75396 215 aa14.8□□□□□ -0.04
PMS1-221ENST00000624204 PIK3CBP42338 1070 aa14.8□□□□□ -0.04
PMS1-221ENST00000624204 TBCEQ15813 527 aaPredicted RBP14.8□□□□□ -0.04
PMS1-221ENST00000624204 ZBTB6Q15916 424 aa14.8□□□□□ -0.04
PMS1-221ENST00000624204 BTBD16Q32M84 506 aa14.8□□□□□ -0.04
PMS1-221ENST00000624204 CYP27C1Q4G0S4 372 aa14.8□□□□□ -0.04
PMS1-221ENST00000624204 FAM171A1Q5VUB5 890 aa14.8□□□□□ -0.04
PMS1-221ENST00000624204 SNX20Q7Z614 316 aa14.8□□□□□ -0.04
PMS1-221ENST00000624204 KLHDC8BQ8IXV7 354 aa14.8□□□□□ -0.04
PMS1-221ENST00000624204 FCRL2Q96LA5 508 aaPredicted RBP14.8□□□□□ -0.04
PMS1-221ENST00000624204 APOL5Q9BWW9 433 aa14.8□□□□□ -0.04
PMS1-221ENST00000624204 MAGIXQ9H6Y5 334 aa14.8□□□□□ -0.04
PMS1-221ENST00000624204 CATSPERBQ9H7T0 1116 aa14.8□□□□□ -0.04
PMS1-221ENST00000624204 BPIFA1Q9NP55 256 aa14.8□□□□□ -0.04
PMS1-221ENST00000624204 ABCB8Q9NUT2 735 aa14.8□□□□□ -0.04
PMS1-221ENST00000624204 CFL2Q9Y281 166 aa14.8□□□□□ -0.04
PMS1-221ENST00000624204 SMIM28A0A1B0GU29 152 aa14.79□□□□□ -0.04
PMS1-221ENST00000624204 MYBPHLA2RUH7 354 aa14.79□□□□□ -0.04
PMS1-221ENST00000624204 GABRDO14764 452 aa14.79□□□□□ -0.04
PMS1-221ENST00000624204 PAGE1O75459 146 aa14.79□□□□□ -0.04
PMS1-221ENST00000624204 ERN1O75460 977 aaKnown RBP14.79□□□□□ -0.04
PMS1-221ENST00000624204 ADORA3P0DMS8 318 aa14.79□□□□□ -0.04
PMS1-221ENST00000624204 SDHBP21912 280 aa14.79□□□□□ -0.04
PMS1-221ENST00000624204 MYL9P24844 172 aa14.79□□□□□ -0.04
PMS1-221ENST00000624204 POU1F1P28069 291 aa14.79□□□□□ -0.04
PMS1-221ENST00000624204 DNAJA1P31689 397 aaKnown RBP14.79□□□□□ -0.04
PMS1-221ENST00000624204 TSTQ16762 297 aaKnown RBP14.79□□□□□ -0.04
PMS1-221ENST00000624204 GNASQ5JWF2 1037 aa14.79□□□□□ -0.04
PMS1-221ENST00000624204 CCSAPQ6IQ19 270 aaPredicted RBP14.79□□□□□ -0.04
PMS1-221ENST00000624204 CNPPD1Q9BV87 410 aa14.79□□□□□ -0.04
PMS1-221ENST00000624204 GON7Q9BXV9 100 aa14.79□□□□□ -0.04
PMS1-221ENST00000624204 REEP1Q9H902 201 aa14.79□□□□□ -0.04
PMS1-221ENST00000624204 RAD18Q9NS91 495 aa14.79□□□□□ -0.04
PMS1-221ENST00000624204 LDB2O43679 373 aa14.79□□□□□ -0.04
PMS1-221ENST00000624204 C1QCP02747 245 aa14.79□□□□□ -0.04
PMS1-221ENST00000624204 PSKH1P11801 424 aa14.79□□□□□ -0.04
PMS1-221ENST00000624204 PTGS2P35354 604 aa14.79□□□□□ -0.04
PMS1-221ENST00000624204 LILRA4P59901 499 aa14.79□□□□□ -0.04
PMS1-221ENST00000624204 POU6F2P78424 691 aaPredicted RBP14.79□□□□□ -0.04
PMS1-221ENST00000624204 PTCHD3Q3KNS1 767 aa14.79□□□□□ -0.04
PMS1-221ENST00000624204 DCAF4L1Q3SXM0 396 aa14.79□□□□□ -0.04
PMS1-221ENST00000624204 MARC1Q5VT66 337 aa14.79□□□□□ -0.04
PMS1-221ENST00000624204 NLRP8Q86W28 1048 aa14.79□□□□□ -0.04
PMS1-221ENST00000624204 LIX1Q8N485 282 aa14.79□□□□□ -0.04
PMS1-221ENST00000624204 YIPF7Q8N8F6 280 aa14.79□□□□□ -0.04
PMS1-221ENST00000624204 OR4L1Q8NH43 312 aa14.79□□□□□ -0.04
PMS1-221ENST00000624204 COQ8BQ96D53 544 aa14.79□□□□□ -0.04
PMS1-221ENST00000624204 PPP1R2P1Q96PQ5 205 aa14.79□□□□□ -0.04
PMS1-221ENST00000624204 DERL2Q9GZP9 239 aa14.79□□□□□ -0.04
PMS1-221ENST00000624204 AGO3Q9H9G7 860 aaKnown RBP14.79□□□□□ -0.04
PMS1-221ENST00000624204 SMURF1Q9HCE7 757 aa14.79□□□□□ -0.04
PMS1-221ENST00000624204 SIRT5Q9NXA8 310 aa14.79□□□□□ -0.04
PMS1-221ENST00000624204 HSPB11Q9Y547 144 aa14.79□□□□□ -0.04
PMS1-221ENST00000624204 GRXCR2A6NFK2 248 aa14.79□□□□□ -0.04
PMS1-221ENST00000624204 PIRO00625 290 aa14.79□□□□□ -0.04
PMS1-221ENST00000624204 NDUFS3O75489 264 aa14.79□□□□□ -0.04
PMS1-221ENST00000624204 COL6A1P12109 1028 aa14.79□□□□□ -0.04
PMS1-221ENST00000624204 FPR1P21462 350 aa14.79□□□□□ -0.04
PMS1-221ENST00000624204 VLDLRP98155 873 aa14.79□□□□□ -0.04
PMS1-221ENST00000624204 ZNF33AQ06730 810 aa14.79□□□□□ -0.04
PMS1-221ENST00000624204 FAPQ12884 760 aa14.79□□□□□ -0.04
PMS1-221ENST00000624204 PTPRRQ15256 657 aa14.79□□□□□ -0.04
PMS1-221ENST00000624204 PTPRNQ16849 979 aa14.79□□□□□ -0.04
PMS1-221ENST00000624204 SV2CQ496J9 727 aa14.79□□□□□ -0.04
PMS1-221ENST00000624204 LAX1Q8IWV1 398 aa14.79□□□□□ -0.04
PMS1-221ENST00000624204 SLC43A3Q8NBI5 491 aa14.79□□□□□ -0.04
PMS1-221ENST00000624204 OR4F6Q8NGB9 312 aa14.79□□□□□ -0.04
PMS1-221ENST00000624204 VANGL1Q8TAA9 524 aaPredicted RBP14.79□□□□□ -0.04
PMS1-221ENST00000624204 GGHQ92820 318 aa14.79□□□□□ -0.04
PMS1-221ENST00000624204 AFF4Q9UHB7 1163 aaKnown RBP14.79□□□□□ -0.04
PMS1-221ENST00000624204 OGDHLQ9ULD0 1010 aa14.79□□□□□ -0.04
PMS1-221ENST00000624204 ERVW-1Q9UQF0 538 aa14.79□□□□□ -0.04
PMS1-221ENST00000624204 PCDHGB2Q9Y5G2 931 aa14.79□□□□□ -0.04
PMS1-221ENST00000624204 PRRC2BQ5JSZ5 2229 aaKnown RBP14.79□□□□□ -0.04
PMS1-221ENST00000624204 H3BM21 787 aa14.78□□□□□ -0.04
PMS1-221ENST00000624204 EDNRBP24530 442 aa14.78□□□□□ -0.04
PMS1-221ENST00000624204 ST3GAL4Q11206 333 aa14.78□□□□□ -0.04
PMS1-221ENST00000624204 EFR3AQ14156 821 aa14.78□□□□□ -0.04
PMS1-221ENST00000624204 SLC27A1Q6PCB7 646 aa14.78□□□□□ -0.04
PMS1-221ENST00000624204 VN1R5Q7Z5H4 357 aa14.78□□□□□ -0.04
PMS1-221ENST00000624204 CIR1Q86X95 450 aaPredicted RBP14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms