RNA–Protein interactions for RNA: ENST00000624166.3

ATRX-214, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 1 (best)

Gene ATRX, Length 4,272 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-214ENST00000624166 ITIH5Q86UX2 942 aa11.54□□□□□ -0.56
ATRX-214ENST00000624166 GFM1Q96RP9 751 aaKnown RBP11.54□□□□□ -0.56
ATRX-214ENST00000624166 RACGAP1Q9H0H5 632 aa11.54□□□□□ -0.56
ATRX-214ENST00000624166 SGK2Q9HBY8 427 aa11.54□□□□□ -0.56
ATRX-214ENST00000624166 ITM2CQ9NQX7 267 aa11.54□□□□□ -0.56
ATRX-214ENST00000624166 POLR3BQ9NW08 1133 aaPredicted RBP11.54□□□□□ -0.56
ATRX-214ENST00000624166 ZNF224Q9NZL3 707 aa11.54□□□□□ -0.56
ATRX-214ENST00000624166 MRPS7Q9Y2R9 242 aaKnown RBP11.54□□□□□ -0.56
ATRX-214ENST00000624166 A8MX80 341 aa11.54□□□□□ -0.56
ATRX-214ENST00000624166 DIRAS1O95057 198 aa11.54□□□□□ -0.56
ATRX-214ENST00000624166 ALPLP05186 524 aa11.54□□□□□ -0.56
ATRX-214ENST00000624166 C8GP07360 202 aa11.54□□□□□ -0.56
ATRX-214ENST00000624166 KCNA5P22460 613 aa11.54□□□□□ -0.56
ATRX-214ENST00000624166 EDNRBP24530 442 aa11.54□□□□□ -0.56
ATRX-214ENST00000624166 SPAM1P38567 509 aa11.54□□□□□ -0.56
ATRX-214ENST00000624166 FEN1P39748 380 aaKnown RBP11.54□□□□□ -0.56
ATRX-214ENST00000624166 NKX2-5P52952 324 aaPredicted RBP11.54□□□□□ -0.56
ATRX-214ENST00000624166 RAPSNQ13702 412 aa11.54□□□□□ -0.56
ATRX-214ENST00000624166 OR4D1Q15615 310 aa11.54□□□□□ -0.56
ATRX-214ENST00000624166 PLA2G4EQ3MJ16 856 aa11.54□□□□□ -0.56
ATRX-214ENST00000624166 CRTC2Q53ET0 693 aaPredicted RBP11.54□□□□□ -0.56
ATRX-214ENST00000624166 C10orf62Q5T681 223 aaPredicted RBP11.54□□□□□ -0.56
ATRX-214ENST00000624166 OR4F3Q6IEY1 312 aa11.54□□□□□ -0.56
ATRX-214ENST00000624166 C11orf88Q6PI97 169 aa11.54□□□□□ -0.56
ATRX-214ENST00000624166 CXXC5Q7LFL8 322 aaKnown RBP11.54□□□□□ -0.56
ATRX-214ENST00000624166 MRPS31Q92665 395 aaKnown RBP11.54□□□□□ -0.56
ATRX-214ENST00000624166 HTATIP2Q9BUP3 242 aa11.54□□□□□ -0.56
ATRX-214ENST00000624166 PDGFDQ9GZP0 370 aaPredicted RBP11.54□□□□□ -0.56
ATRX-214ENST00000624166 GORASP2Q9H8Y8 452 aa11.54□□□□□ -0.56
ATRX-214ENST00000624166 RAD18Q9NS91 495 aa11.54□□□□□ -0.56
ATRX-214ENST00000624166 NLE1Q9NVX2 485 aaPredicted RBP11.54□□□□□ -0.56
ATRX-214ENST00000624166 FAM120CQ9NX05 1096 aaKnown RBP11.54□□□□□ -0.56
ATRX-214ENST00000624166 FLRT1Q9NZU1 646 aa11.54□□□□□ -0.56
ATRX-214ENST00000624166 HSFX1Q9UBD0 423 aa11.54□□□□□ -0.56
ATRX-214ENST00000624166 SLC27A5Q9Y2P5 690 aa11.54□□□□□ -0.56
ATRX-214ENST00000624166 PCDHGB6Q9Y5F9 930 aa11.54□□□□□ -0.56
ATRX-214ENST00000624166 OR6C75A6NL08 312 aa11.53□□□□□ -0.56
ATRX-214ENST00000624166 H0YC42 278 aa11.53□□□□□ -0.56
ATRX-214ENST00000624166 ARNTLO00327 626 aa11.53□□□□□ -0.56
ATRX-214ENST00000624166 HOXA2O43364 376 aa11.53□□□□□ -0.56
ATRX-214ENST00000624166 IL7P13232 177 aa11.53□□□□□ -0.56
ATRX-214ENST00000624166 TNNI3P19429 210 aa11.53□□□□□ -0.56
ATRX-214ENST00000624166 PTGS2P35354 604 aa11.53□□□□□ -0.56
ATRX-214ENST00000624166 GGT5P36269 586 aa11.53□□□□□ -0.56
ATRX-214ENST00000624166 SNRPD1P62314 119 aaKnown RBP11.53□□□□□ -0.56
ATRX-214ENST00000624166 EMX1Q04741 257 aaPredicted RBP11.53□□□□□ -0.56
ATRX-214ENST00000624166 STX4Q12846 297 aa11.53□□□□□ -0.56
ATRX-214ENST00000624166 LAPTM4AQ15012 233 aa11.53□□□□□ -0.56
ATRX-214ENST00000624166 SNAPC1Q16533 368 aa11.53□□□□□ -0.56
ATRX-214ENST00000624166 TRIM71Q2Q1W2 868 aaKnown RBP11.53□□□□□ -0.56
ATRX-214ENST00000624166 PROX2Q3B8N5 592 aa11.53□□□□□ -0.56
ATRX-214ENST00000624166 PKDCCQ504Y2 493 aa11.53□□□□□ -0.56
ATRX-214ENST00000624166 RFTN2Q52LD8 501 aaPredicted RBP11.53□□□□□ -0.56
ATRX-214ENST00000624166 BEND5Q7L4P6 421 aa11.53□□□□□ -0.56
ATRX-214ENST00000624166 DCP2Q8IU60 420 aaKnown RBP11.53□□□□□ -0.56
ATRX-214ENST00000624166 TICAM1Q8IUC6 712 aa11.53□□□□□ -0.56
ATRX-214ENST00000624166 UBE2J2Q8N2K1 259 aa11.53□□□□□ -0.56
ATRX-214ENST00000624166 CDCA5Q96FF9 252 aa11.53□□□□□ -0.56
ATRX-214ENST00000624166 C3orf30Q96M34 536 aa11.53□□□□□ -0.56
ATRX-214ENST00000624166 BRD9Q9H8M2 597 aa11.53□□□□□ -0.56
ATRX-214ENST00000624166 CRTAC1Q9NQ79 661 aa11.53□□□□□ -0.56
ATRX-214ENST00000624166 PAK6Q9NQU5 681 aaPredicted RBP11.53□□□□□ -0.56
ATRX-214ENST00000624166 DUS2Q9NX74 493 aaKnown RBP11.53□□□□□ -0.56
ATRX-214ENST00000624166 PAQR5Q9NXK6 330 aaPredicted RBP11.53□□□□□ -0.56
ATRX-214ENST00000624166 MARCH4Q9P2E8 410 aaPredicted RBP11.53□□□□□ -0.56
ATRX-214ENST00000624166 ABCD2Q9UBJ2 740 aa11.53□□□□□ -0.56
ATRX-214ENST00000624166 PHLPP1O60346 1717 aa11.53□□□□□ -0.56
ATRX-214ENST00000624166 AGAP5A6NIR3 686 aa11.53□□□□□ -0.56
ATRX-214ENST00000624166 CKMP06732 381 aa11.53□□□□□ -0.56
ATRX-214ENST00000624166 ALDOCP09972 364 aaKnown RBP11.53□□□□□ -0.56
ATRX-214ENST00000624166 AGXTP21549 392 aa11.53□□□□□ -0.56
ATRX-214ENST00000624166 ST3GAL4Q11206 333 aa11.53□□□□□ -0.56
ATRX-214ENST00000624166 SMARCB1Q12824 385 aa11.53□□□□□ -0.56
ATRX-214ENST00000624166 SERINC3Q13530 473 aa11.53□□□□□ -0.56
ATRX-214ENST00000624166 E2F2Q14209 437 aa11.53□□□□□ -0.56
ATRX-214ENST00000624166 OXA1LQ15070 435 aa11.53□□□□□ -0.56
ATRX-214ENST00000624166 KCTD11Q693B1 232 aa11.53□□□□□ -0.56
ATRX-214ENST00000624166 PM20D1Q6GTS8 502 aa11.53□□□□□ -0.56
ATRX-214ENST00000624166 ZSWIM9Q86XI8 627 aa11.53□□□□□ -0.56
ATRX-214ENST00000624166 SLC30A8Q8IWU4 369 aa11.53□□□□□ -0.56
ATRX-214ENST00000624166 OR10Q1Q8NGQ4 319 aa11.53□□□□□ -0.56
ATRX-214ENST00000624166 PPP1R13LQ8WUF5 828 aa11.53□□□□□ -0.56
ATRX-214ENST00000624166 UFD1Q92890 307 aa11.53□□□□□ -0.56
ATRX-214ENST00000624166 ASPNQ9BXN1 380 aa11.53□□□□□ -0.56
ATRX-214ENST00000624166 SLC32A1Q9H598 525 aa11.53□□□□□ -0.56
ATRX-214ENST00000624166 SMPD4Q9NXE4 827 aa11.53□□□□□ -0.56
ATRX-214ENST00000624166 AKAP7Q9P0M2 348 aaPredicted RBP11.53□□□□□ -0.56
ATRX-214ENST00000624166 MOSPD1Q9UJG1 213 aa11.53□□□□□ -0.56
ATRX-214ENST00000624166 ERVW-1Q9UQF0 538 aa11.53□□□□□ -0.56
ATRX-214ENST00000624166 RWDD3Q9Y3V2 267 aa11.53□□□□□ -0.56
ATRX-214ENST00000624166 ARVCFO00192 962 aa11.53□□□□□ -0.56
ATRX-214ENST00000624166 ACSL4O60488 711 aa11.53□□□□□ -0.56
ATRX-214ENST00000624166 NR2F1P10589 423 aa11.53□□□□□ -0.56
ATRX-214ENST00000624166 ERP29P30040 261 aaKnown RBP11.53□□□□□ -0.56
ATRX-214ENST00000624166 CYP4F8P98187 520 aa11.53□□□□□ -0.56
ATRX-214ENST00000624166 PTGR1Q14914 329 aa11.53□□□□□ -0.56
ATRX-214ENST00000624166 ZDHHC20Q5W0Z9 365 aa11.53□□□□□ -0.56
ATRX-214ENST00000624166 KRT78Q8N1N4 520 aa11.53□□□□□ -0.56
ATRX-214ENST00000624166 UMODL1-AS1Q8N2C9 162 aa11.53□□□□□ -0.56
ATRX-214ENST00000624166 BBS4Q96RK4 519 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms