RNA–Protein interactions for RNA: ENST00000624009.3

LINC00963-217, long intergenic non-protein coding RNA 963, humanhuman

TSL 5 BASIC

Gene LINC00963, Length 663 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-217ENST00000624009 OR2A1Q8NGT9 310 aa11.96□□□□□ -0.49
LINC00963-217ENST00000624009 IP6K3Q96PC2 410 aa11.96□□□□□ -0.49
LINC00963-217ENST00000624009 IL17FQ96PD4 163 aa11.96□□□□□ -0.49
LINC00963-217ENST00000624009 GBP5Q96PP8 586 aa11.96□□□□□ -0.49
LINC00963-217ENST00000624009 KRT12Q99456 494 aa11.96□□□□□ -0.49
LINC00963-217ENST00000624009 GPR21Q99679 349 aa11.96□□□□□ -0.49
LINC00963-217ENST00000624009 ERP44Q9BS26 406 aa11.96□□□□□ -0.49
LINC00963-217ENST00000624009 SLC7A5P2Q9GIP4 190 aa11.96□□□□□ -0.49
LINC00963-217ENST00000624009 SLC25A18Q9H1K4 315 aa11.96□□□□□ -0.49
LINC00963-217ENST00000624009 CHST8Q9H2A9 424 aa11.96□□□□□ -0.49
LINC00963-217ENST00000624009 PLAC1Q9HBJ0 212 aa11.96□□□□□ -0.49
LINC00963-217ENST00000624009 NSMCE4AQ9NXX6 385 aa11.96□□□□□ -0.49
LINC00963-217ENST00000624009 UTP6Q9NYH9 597 aaKnown RBP11.96□□□□□ -0.49
LINC00963-217ENST00000624009 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.96□□□□□ -0.49
LINC00963-217ENST00000624009 GALPQ9UBC7 116 aa11.96□□□□□ -0.49
LINC00963-217ENST00000624009 TRMT6Q9UJA5 497 aaKnown RBP11.96□□□□□ -0.49
LINC00963-217ENST00000624009 PADI2Q9Y2J8 665 aa11.96□□□□□ -0.49
LINC00963-217ENST00000624009 KCNMB2Q9Y691 235 aa11.96□□□□□ -0.49
LINC00963-217ENST00000624009 PTPN13Q12923 2485 aa11.96□□□□□ -0.5
LINC00963-217ENST00000624009 KATNA1O75449 491 aa11.95□□□□□ -0.5
LINC00963-217ENST00000624009 CCNDBP1O95273 360 aa11.95□□□□□ -0.5
LINC00963-217ENST00000624009 AHSGP02765 367 aa11.95□□□□□ -0.5
LINC00963-217ENST00000624009 TUBB4AP04350 444 aa11.95□□□□□ -0.5
LINC00963-217ENST00000624009 C8GP07360 202 aa11.95□□□□□ -0.5
LINC00963-217ENST00000624009 CAPN1P07384 714 aa11.95□□□□□ -0.5
LINC00963-217ENST00000624009 HRH2P25021 359 aa11.95□□□□□ -0.5
LINC00963-217ENST00000624009 GABRB3P28472 473 aa11.95□□□□□ -0.5
LINC00963-217ENST00000624009 PMS2P54278 862 aa11.95□□□□□ -0.5
LINC00963-217ENST00000624009 EMP3P54852 163 aa11.95□□□□□ -0.5
LINC00963-217ENST00000624009 ABATP80404 500 aa11.95□□□□□ -0.5
LINC00963-217ENST00000624009 MPP1Q00013 466 aa11.95□□□□□ -0.5
LINC00963-217ENST00000624009 CAV1Q03135 178 aa11.95□□□□□ -0.5
LINC00963-217ENST00000624009 CALCOCO2Q13137 446 aa11.95□□□□□ -0.5
LINC00963-217ENST00000624009 KCNAB2Q13303 367 aa11.95□□□□□ -0.5
LINC00963-217ENST00000624009 NCF4Q15080 339 aa11.95□□□□□ -0.5
LINC00963-217ENST00000624009 FCRL6Q6DN72 434 aa11.95□□□□□ -0.5
LINC00963-217ENST00000624009 FAM198BQ6UWH4 519 aa11.95□□□□□ -0.5
LINC00963-217ENST00000624009 SLC26A11Q86WA9 606 aa11.95□□□□□ -0.5
LINC00963-217ENST00000624009 MCATQ8IVS2 390 aaKnown RBP11.95□□□□□ -0.5
LINC00963-217ENST00000624009 IGDCC3Q8IVU1 814 aa11.95□□□□□ -0.5
LINC00963-217ENST00000624009 ANKRD7Q92527 254 aa11.95□□□□□ -0.5
LINC00963-217ENST00000624009 SLC30A3Q99726 388 aa11.95□□□□□ -0.5
LINC00963-217ENST00000624009 TRIM51Q9BSJ1 452 aa11.95□□□□□ -0.5
LINC00963-217ENST00000624009 SEMA4CQ9C0C4 833 aa11.95□□□□□ -0.5
LINC00963-217ENST00000624009 KLHL25Q9H0H3 589 aa11.95□□□□□ -0.5
LINC00963-217ENST00000624009 AKIRIN1Q9H9L7 192 aaPredicted RBP11.95□□□□□ -0.5
LINC00963-217ENST00000624009 MOCS1Q9NZB8 636 aa11.95□□□□□ -0.5
LINC00963-217ENST00000624009 TCFL5Q9UL49 500 aa11.95□□□□□ -0.5
LINC00963-217ENST00000624009 MRPS18BQ9Y676 258 aaKnown RBP11.95□□□□□ -0.5
LINC00963-217ENST00000624009 OR2A25A4D2G3 310 aa11.94□□□□□ -0.5
LINC00963-217ENST00000624009 E7ENX8 843 aa11.94□□□□□ -0.5
LINC00963-217ENST00000624009 SLC16A8O95907 504 aa11.94□□□□□ -0.5
LINC00963-217ENST00000624009 ALBP02768 609 aa11.94□□□□□ -0.5
LINC00963-217ENST00000624009 PRB1P04280 392 aa11.94□□□□□ -0.5
LINC00963-217ENST00000624009 FAM87AP0C7U9 286 aa11.94□□□□□ -0.5
LINC00963-217ENST00000624009 PRKAR1AP10644 381 aa11.94□□□□□ -0.5
LINC00963-217ENST00000624009 PIM1P11309 404 aaPredicted RBP11.94□□□□□ -0.5
LINC00963-217ENST00000624009 CMPK1P30085 196 aa11.94□□□□□ -0.5
LINC00963-217ENST00000624009 RPL21P46778 160 aaKnown RBP11.94□□□□□ -0.5
LINC00963-217ENST00000624009 PNLIPRP1P54315 467 aa11.94□□□□□ -0.5
LINC00963-217ENST00000624009 DCDP81605 110 aaKnown RBP11.94□□□□□ -0.5
LINC00963-217ENST00000624009 TIAL1Q01085 375 aaKnown RBP eCLIP11.94□□□□□ -0.53e-6■□□□□ 10.2
LINC00963-217ENST00000624009 TAP2Q03519 686 aa11.94□□□□□ -0.5
LINC00963-217ENST00000624009 PRDX1Q06830 199 aaKnown RBP11.94□□□□□ -0.5
LINC00963-217ENST00000624009 MGAT5Q09328 741 aa11.94□□□□□ -0.5
LINC00963-217ENST00000624009 ERV3-1Q14264 604 aa11.94□□□□□ -0.5
LINC00963-217ENST00000624009 GRM7Q14831 915 aa11.94□□□□□ -0.5
LINC00963-217ENST00000624009 FAM214AQ32MH5 1076 aa11.94□□□□□ -0.5
LINC00963-217ENST00000624009 CCSMST1Q4G0I0 132 aa11.94□□□□□ -0.5
LINC00963-217ENST00000624009 PRAMEF17Q5VTA0 474 aa11.94□□□□□ -0.5
LINC00963-217ENST00000624009 DUPD1Q68J44 220 aa11.94□□□□□ -0.5
LINC00963-217ENST00000624009 C16orf46Q6P387 395 aa11.94□□□□□ -0.5
LINC00963-217ENST00000624009 FAM199XQ6PEV8 388 aaPredicted RBP11.94□□□□□ -0.5
LINC00963-217ENST00000624009 RNF44Q7L0R7 432 aa11.94□□□□□ -0.5
LINC00963-217ENST00000624009 MCOLN3Q8TDD5 553 aa11.94□□□□□ -0.5
LINC00963-217ENST00000624009 ADAMTS17Q8TE56 1095 aa11.94□□□□□ -0.5
LINC00963-217ENST00000624009 FKBP10Q96AY3 582 aa11.94□□□□□ -0.5
LINC00963-217ENST00000624009 FAM136AQ96C01 138 aa11.94□□□□□ -0.5
LINC00963-217ENST00000624009 PDLIM5Q96HC4 596 aaKnown RBP11.94□□□□□ -0.5
LINC00963-217ENST00000624009 CCDC138Q96M89 665 aa11.94□□□□□ -0.5
LINC00963-217ENST00000624009 PKP4Q99569 1192 aa11.94□□□□□ -0.5
LINC00963-217ENST00000624009 WDR83Q9BRX9 315 aaKnown RBP11.94□□□□□ -0.5
LINC00963-217ENST00000624009 NDC1Q9BTX1 674 aa11.94□□□□□ -0.5
LINC00963-217ENST00000624009 PCBD2Q9H0N5 130 aa11.94□□□□□ -0.5
LINC00963-217ENST00000624009 RAB17Q9H0T7 212 aa11.94□□□□□ -0.5
LINC00963-217ENST00000624009 PARVBQ9HBI1 364 aa11.94□□□□□ -0.5
LINC00963-217ENST00000624009 TXLNGQ9NUQ3 528 aa11.94□□□□□ -0.5
LINC00963-217ENST00000624009 ZFATQ9P243 1243 aa11.94□□□□□ -0.5
LINC00963-217ENST00000624009 SNX7Q9UNH6 387 aa11.94□□□□□ -0.5
LINC00963-217ENST00000624009 CHMP2BQ9UQN3 213 aa11.94□□□□□ -0.5
LINC00963-217ENST00000624009 RUVBL2Q9Y230 463 aaKnown RBP11.94□□□□□ -0.5
LINC00963-217ENST00000624009 UTP11Q9Y3A2 253 aaKnown RBP11.94□□□□□ -0.5
LINC00963-217ENST00000624009 SPTBN1Q01082 2364 aaKnown RBP11.94□□□□□ -0.5
LINC00963-217ENST00000624009 ASH1LQ9NR48 2969 aaKnown RBP11.93□□□□□ -0.5
LINC00963-217ENST00000624009 A0A1B0GX78 115 aa11.93□□□□□ -0.5
LINC00963-217ENST00000624009 HCRTR1O43613 425 aa11.93□□□□□ -0.5
LINC00963-217ENST00000624009 BANF1O75531 89 aa11.93□□□□□ -0.5
LINC00963-217ENST00000624009 RFPL1O75677 317 aa11.93□□□□□ -0.5
LINC00963-217ENST00000624009 IGHEP01854 428 aa11.93□□□□□ -0.5
LINC00963-217ENST00000624009 GSTA2P09210 222 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms