RNA–Protein interactions for RNA: ENST00000623007.3

LDB3-208, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,664 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-208ENST00000623007 CD207Q9UJ71 328 aa15.86■□□□□ 0.13
LDB3-208ENST00000623007 PDE4DIPQ5VU43 2346 aa15.86■□□□□ 0.13
LDB3-208ENST00000623007 ZFC3H1O60293 1989 aaKnown RBP15.86■□□□□ 0.13
LDB3-208ENST00000623007 A0A1W2PP55 124 aa15.86■□□□□ 0.13
LDB3-208ENST00000623007 FOXE1O00358 373 aaPredicted RBP15.86■□□□□ 0.13
LDB3-208ENST00000623007 PCCBP05166 539 aa15.86■□□□□ 0.13
LDB3-208ENST00000623007 FCGR1AP12314 374 aa15.86■□□□□ 0.13
LDB3-208ENST00000623007 HOXB2P14652 356 aa15.86■□□□□ 0.13
LDB3-208ENST00000623007 CXCR2P25025 360 aa15.86■□□□□ 0.13
LDB3-208ENST00000623007 PDHA2P29803 388 aa15.86■□□□□ 0.13
LDB3-208ENST00000623007 HSPA13P48723 471 aa15.86■□□□□ 0.13
LDB3-208ENST00000623007 HMGCS1Q01581 520 aa15.86■□□□□ 0.13
LDB3-208ENST00000623007 SRSF11Q05519 484 aaKnown RBP15.86■□□□□ 0.13
LDB3-208ENST00000623007 MAPKAPK3Q16644 382 aa15.86■□□□□ 0.13
LDB3-208ENST00000623007 ZXDCQ2QGD7 858 aaPredicted RBP15.86■□□□□ 0.13
LDB3-208ENST00000623007 SGO1Q5FBB7 561 aa15.86■□□□□ 0.13
LDB3-208ENST00000623007 TMEM196Q5HYL7 178 aa15.86■□□□□ 0.13
LDB3-208ENST00000623007 EOGTQ5NDL2 527 aa15.86■□□□□ 0.13
LDB3-208ENST00000623007 ATG9BQ674R7 924 aa15.86■□□□□ 0.13
LDB3-208ENST00000623007 NAIF1Q69YI7 327 aaPredicted RBP15.86■□□□□ 0.13
LDB3-208ENST00000623007 EP400NLQ6ZTU2 488 aa15.86■□□□□ 0.13
LDB3-208ENST00000623007 C11orf96Q7Z7L8 435 aa15.86■□□□□ 0.13
LDB3-208ENST00000623007 DENND6BQ8NEG7 585 aa15.86■□□□□ 0.13
LDB3-208ENST00000623007 GANCQ8TET4 914 aa15.86■□□□□ 0.13
LDB3-208ENST00000623007 ZNF480Q8WV37 535 aa15.86■□□□□ 0.13
LDB3-208ENST00000623007 NRG4Q8WWG1 115 aa15.86■□□□□ 0.13
LDB3-208ENST00000623007 TMEM125Q96AQ2 219 aa15.86■□□□□ 0.13
LDB3-208ENST00000623007 LRCH3Q96II8 777 aa15.86■□□□□ 0.13
LDB3-208ENST00000623007 RAB11FIP5Q9BXF6 653 aa15.86■□□□□ 0.13
LDB3-208ENST00000623007 C8orf4Q9NR00 106 aa15.86■□□□□ 0.13
LDB3-208ENST00000623007 SPATA6Q9NWH7 488 aaPredicted RBP15.86■□□□□ 0.13
LDB3-208ENST00000623007 CNOT11Q9UKZ1 510 aaKnown RBP15.86■□□□□ 0.13
LDB3-208ENST00000623007 AP4S1Q9Y587 144 aa15.86■□□□□ 0.13
LDB3-208ENST00000623007 PRRC2BQ5JSZ5 2229 aaKnown RBP15.86■□□□□ 0.13
LDB3-208ENST00000623007 PRSS51A0A1B0GVH4 220 aa15.85■□□□□ 0.13
LDB3-208ENST00000623007 H0YJX3 145 aa15.85■□□□□ 0.13
LDB3-208ENST00000623007 H3BNX3 289 aa15.85■□□□□ 0.13
LDB3-208ENST00000623007 PLK4O00444 970 aa15.85■□□□□ 0.13
LDB3-208ENST00000623007 NME4O00746 187 aa15.85■□□□□ 0.13
LDB3-208ENST00000623007 SLC34A2O95436 690 aa15.85■□□□□ 0.13
LDB3-208ENST00000623007 PGRP06401 933 aa15.85■□□□□ 0.13
LDB3-208ENST00000623007 GPIP06744 558 aa15.85■□□□□ 0.13
LDB3-208ENST00000623007 BCKDHAP12694 445 aa15.85■□□□□ 0.13
LDB3-208ENST00000623007 AMD1P17707 334 aa15.85■□□□□ 0.13
LDB3-208ENST00000623007 TCN1P20061 433 aaPredicted RBP15.85■□□□□ 0.13
LDB3-208ENST00000623007 IL10P22301 178 aa15.85■□□□□ 0.13
LDB3-208ENST00000623007 BDKRB1P46663 353 aa15.85■□□□□ 0.13
LDB3-208ENST00000623007 MRPS22P82650 360 aaKnown RBP15.85■□□□□ 0.13
LDB3-208ENST00000623007 DOC2AQ14183 400 aa15.85■□□□□ 0.13
LDB3-208ENST00000623007 FXNQ16595 210 aa15.85■□□□□ 0.13
LDB3-208ENST00000623007 LCTLQ6UWM7 567 aa15.85■□□□□ 0.13
LDB3-208ENST00000623007 TRIM74Q86UV6 250 aa15.85■□□□□ 0.13
LDB3-208ENST00000623007 EFCAB3Q8N7B9 438 aa15.85■□□□□ 0.13
LDB3-208ENST00000623007 TP53I13Q8NBR0 393 aaPredicted RBP15.85■□□□□ 0.13
LDB3-208ENST00000623007 VPS33AQ96AX1 596 aa15.85■□□□□ 0.13
LDB3-208ENST00000623007 TEX37Q96LM6 180 aa15.85■□□□□ 0.13
LDB3-208ENST00000623007 BTBD9Q96Q07 612 aa15.85■□□□□ 0.13
LDB3-208ENST00000623007 KCTD14Q9BQ13 255 aaPredicted RBP15.85■□□□□ 0.13
LDB3-208ENST00000623007 SLC17A9Q9BYT1 436 aa15.85■□□□□ 0.13
LDB3-208ENST00000623007 TRIT1Q9H3H1 467 aaKnown RBP15.85■□□□□ 0.13
LDB3-208ENST00000623007 Q9H521 79 aa15.85■□□□□ 0.13
LDB3-208ENST00000623007 ACTL8Q9H568 366 aa15.85■□□□□ 0.13
LDB3-208ENST00000623007 FARSBQ9NSD9 589 aaKnown RBP15.85■□□□□ 0.13
LDB3-208ENST00000623007 ARMC1Q9NVT9 282 aa15.85■□□□□ 0.13
LDB3-208ENST00000623007 SIRT5Q9NXA8 310 aa15.85■□□□□ 0.13
LDB3-208ENST00000623007 FAM8A1Q9UBU6 413 aa15.85■□□□□ 0.13
LDB3-208ENST00000623007 MAGEL2Q9UJ55 1249 aa15.85■□□□□ 0.13
LDB3-208ENST00000623007 MCM8Q9UJA3 840 aa15.85■□□□□ 0.13
LDB3-208ENST00000623007 ASF1AQ9Y294 204 aa15.85■□□□□ 0.13
LDB3-208ENST00000623007 SNX13Q9Y5W8 968 aa15.85■□□□□ 0.13
LDB3-208ENST00000623007 TICRRQ7Z2Z1 1910 aa15.84■□□□□ 0.13
LDB3-208ENST00000623007 SORBS2O94875 1100 aaKnown RBP15.84■□□□□ 0.13
LDB3-208ENST00000623007 SLC35G4P0C7Q5 338 aa15.84■□□□□ 0.13
LDB3-208ENST00000623007 PSMA4P25789 261 aaKnown RBP15.84■□□□□ 0.13
LDB3-208ENST00000623007 IL12AP29459 219 aa15.84■□□□□ 0.13
LDB3-208ENST00000623007 RPL3P39023 403 aaKnown RBP15.84■□□□□ 0.13
LDB3-208ENST00000623007 TBPL1P62380 186 aa15.84■□□□□ 0.13
LDB3-208ENST00000623007 DLX2Q07687 328 aaPredicted RBP15.84■□□□□ 0.13
LDB3-208ENST00000623007 ACSM2AQ08AH3 577 aa15.84■□□□□ 0.13
LDB3-208ENST00000623007 ADGRE1Q14246 886 aa15.84■□□□□ 0.13
LDB3-208ENST00000623007 TMEM259Q4ZIN3 620 aa15.84■□□□□ 0.13
LDB3-208ENST00000623007 OGFRL1Q5TC84 451 aaPredicted RBP15.84■□□□□ 0.13
LDB3-208ENST00000623007 ACSM2BQ68CK6 577 aa15.84■□□□□ 0.13
LDB3-208ENST00000623007 CRTC3Q6UUV7 619 aa15.84■□□□□ 0.13
LDB3-208ENST00000623007 HORMAD1Q86X24 394 aa15.84■□□□□ 0.13
LDB3-208ENST00000623007 TBC1D21Q8IYX1 336 aa15.84■□□□□ 0.13
LDB3-208ENST00000623007 KRT78Q8N1N4 520 aa15.84■□□□□ 0.13
LDB3-208ENST00000623007 RNF148Q8N7C7 305 aa15.84■□□□□ 0.13
LDB3-208ENST00000623007 OR5K2Q8NHB8 316 aa15.84■□□□□ 0.13
LDB3-208ENST00000623007 TFGQ92734 400 aaPredicted RBP15.84■□□□□ 0.13
LDB3-208ENST00000623007 CXorf40BQ96DE9 158 aa15.84■□□□□ 0.13
LDB3-208ENST00000623007 ITCHQ96J02 903 aa15.84■□□□□ 0.13
LDB3-208ENST00000623007 HBEGFQ99075 208 aa15.84■□□□□ 0.13
LDB3-208ENST00000623007 PRPF18Q99633 342 aaKnown RBP15.84■□□□□ 0.13
LDB3-208ENST00000623007 CGREF1Q99674 301 aa15.84■□□□□ 0.13
LDB3-208ENST00000623007 ECSITQ9BQ95 431 aa15.84■□□□□ 0.13
LDB3-208ENST00000623007 RPP25Q9BUL9 199 aaKnown RBP15.84■□□□□ 0.13
LDB3-208ENST00000623007 SGK2Q9HBY8 427 aa15.84■□□□□ 0.13
LDB3-208ENST00000623007 E7EQ34 232 aa15.83■□□□□ 0.13
LDB3-208ENST00000623007 CACNB4O00305 520 aaPredicted RBP15.83■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms