RNA–Protein interactions for RNA: ENST00000622702.1

PDLIM2-221, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5 BASIC

Gene PDLIM2, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-221ENST00000622702 AGTR2P50052 363 aa19.16■□□□□ 0.66
PDLIM2-221ENST00000622702 DNAJB13P59910 316 aa19.16■□□□□ 0.66
PDLIM2-221ENST00000622702 TBPL1P62380 186 aa19.16■□□□□ 0.66
PDLIM2-221ENST00000622702 SQSTM1Q13501 440 aa19.16■□□□□ 0.66
PDLIM2-221ENST00000622702 C18orf21Q32NC0 220 aaPredicted RBP19.16■□□□□ 0.66
PDLIM2-221ENST00000622702 HES3Q5TGS1 186 aa19.16■□□□□ 0.66
PDLIM2-221ENST00000622702 CAPN13Q6MZZ7 669 aaPredicted RBP19.16■□□□□ 0.66
PDLIM2-221ENST00000622702 TMPRSS7Q7RTY8 843 aa19.16■□□□□ 0.66
PDLIM2-221ENST00000622702 C10orf107Q8IVU9 208 aa19.16■□□□□ 0.66
PDLIM2-221ENST00000622702 GALNT15Q8N3T1 639 aa19.16■□□□□ 0.66
PDLIM2-221ENST00000622702 LMNTD1Q8N9Z9 388 aa19.16■□□□□ 0.66
PDLIM2-221ENST00000622702 PPFIBP2Q8ND30 876 aa19.16■□□□□ 0.66
PDLIM2-221ENST00000622702 OR10G6Q8NH81 332 aa19.16■□□□□ 0.66
PDLIM2-221ENST00000622702 RSC1A1Q92681 617 aa19.16■□□□□ 0.66
PDLIM2-221ENST00000622702 RAB33BQ9H082 229 aa19.16■□□□□ 0.66
PDLIM2-221ENST00000622702 CCDC177Q9NQR7 707 aaPredicted RBP19.16■□□□□ 0.66
PDLIM2-221ENST00000622702 HRASLS2Q9NWW9 162 aa19.16■□□□□ 0.66
PDLIM2-221ENST00000622702 KLK13Q9UKR3 277 aa19.16■□□□□ 0.66
PDLIM2-221ENST00000622702 ANGPTL2Q9UKU9 493 aa19.16■□□□□ 0.66
PDLIM2-221ENST00000622702 MATN2O00339 956 aa19.16■□□□□ 0.66
PDLIM2-221ENST00000622702 CASC3O15234 703 aaKnown RBP19.16■□□□□ 0.66
PDLIM2-221ENST00000622702 TYRP1P17643 537 aa19.16■□□□□ 0.66
PDLIM2-221ENST00000622702 AMD1P17707 334 aa19.16■□□□□ 0.66
PDLIM2-221ENST00000622702 IMPDH1P20839 514 aa19.16■□□□□ 0.66
PDLIM2-221ENST00000622702 ALDH3A1P30838 453 aa19.16■□□□□ 0.66
PDLIM2-221ENST00000622702 HERVK_113P63132 956 aa19.16■□□□□ 0.66
PDLIM2-221ENST00000622702 KIR2DS3Q14952 304 aa19.16■□□□□ 0.66
PDLIM2-221ENST00000622702 FBXO48Q5FWF7 155 aa19.16■□□□□ 0.66
PDLIM2-221ENST00000622702 HHATQ5VTY9 493 aa19.16■□□□□ 0.66
PDLIM2-221ENST00000622702 LRRC70Q7Z2Q7 622 aa19.16■□□□□ 0.66
PDLIM2-221ENST00000622702 TMPRSS12Q86WS5 348 aa19.16■□□□□ 0.66
PDLIM2-221ENST00000622702 C2orf73Q8N5S3 287 aaPredicted RBP19.16■□□□□ 0.66
PDLIM2-221ENST00000622702 Q8N9G6 341 aaPredicted RBP19.16■□□□□ 0.66
PDLIM2-221ENST00000622702 ESAMQ96AP7 390 aa19.16■□□□□ 0.66
PDLIM2-221ENST00000622702 SLC22A18Q96BI1 424 aa19.16■□□□□ 0.66
PDLIM2-221ENST00000622702 PYCR2Q96C36 320 aa19.16■□□□□ 0.66
PDLIM2-221ENST00000622702 L3HYPDHQ96EM0 354 aa19.16■□□□□ 0.66
PDLIM2-221ENST00000622702 ERVK-6Q9BXR3 956 aa19.16■□□□□ 0.66
PDLIM2-221ENST00000622702 PCBD2Q9H0N5 130 aa19.16■□□□□ 0.66
PDLIM2-221ENST00000622702 INTS7Q9NVH2 962 aaKnown RBP19.16■□□□□ 0.66
PDLIM2-221ENST00000622702 SPHK1Q9NYA1 384 aa19.16■□□□□ 0.66
PDLIM2-221ENST00000622702 EPHA6Q9UF33 1036 aa19.16■□□□□ 0.66
PDLIM2-221ENST00000622702 ASB1Q9Y576 335 aa19.16■□□□□ 0.66
PDLIM2-221ENST00000622702 UNC13CQ8NB66 2214 aa19.15■□□□□ 0.66
PDLIM2-221ENST00000622702 AKAP13Q12802 2813 aa19.15■□□□□ 0.66
PDLIM2-221ENST00000622702 PIPSLA2A3N6 862 aa19.15■□□□□ 0.66
PDLIM2-221ENST00000622702 FAM149AA5PLN7 773 aa19.15■□□□□ 0.66
PDLIM2-221ENST00000622702 DUX1O43812 170 aa19.15■□□□□ 0.66
PDLIM2-221ENST00000622702 TRIM13O60858 407 aa19.15■□□□□ 0.66
PDLIM2-221ENST00000622702 SIX3O95343 332 aaPredicted RBP19.15■□□□□ 0.66
PDLIM2-221ENST00000622702 RPS17P08708 135 aaKnown RBP19.15■□□□□ 0.66
PDLIM2-221ENST00000622702 JUPP14923 745 aa19.15■□□□□ 0.66
PDLIM2-221ENST00000622702 POLR2CP19387 275 aaPredicted RBP19.15■□□□□ 0.66
PDLIM2-221ENST00000622702 CD1CP29017 333 aa19.15■□□□□ 0.66
PDLIM2-221ENST00000622702 OAS2P29728 719 aaKnown RBP19.15■□□□□ 0.66
PDLIM2-221ENST00000622702 PEBP1P30086 187 aaKnown RBP19.15■□□□□ 0.66
PDLIM2-221ENST00000622702 GDF5P43026 501 aa19.15■□□□□ 0.66
PDLIM2-221ENST00000622702 PRKAA1Q13131 559 aa19.15■□□□□ 0.66
PDLIM2-221ENST00000622702 LIPMQ5VYY2 423 aa19.15■□□□□ 0.66
PDLIM2-221ENST00000622702 SUSD1Q6UWL2 747 aa19.15■□□□□ 0.66
PDLIM2-221ENST00000622702 MARCH9Q86YJ5 346 aa19.15■□□□□ 0.66
PDLIM2-221ENST00000622702 ARFGAP2Q8N6H7 521 aa19.15■□□□□ 0.66
PDLIM2-221ENST00000622702 MDM1Q8TC05 714 aa19.15■□□□□ 0.66
PDLIM2-221ENST00000622702 MGARPQ8TDB4 240 aa19.15■□□□□ 0.66
PDLIM2-221ENST00000622702 MED8Q96G25 268 aa19.15■□□□□ 0.66
PDLIM2-221ENST00000622702 TMEM237Q96Q45 408 aa19.15■□□□□ 0.66
PDLIM2-221ENST00000622702 MECRQ9BV79 373 aa19.15■□□□□ 0.66
PDLIM2-221ENST00000622702 SYNDIG1Q9H7V2 258 aa19.15■□□□□ 0.66
PDLIM2-221ENST00000622702 MLXIPLQ9NP71 852 aa19.15■□□□□ 0.66
PDLIM2-221ENST00000622702 CEP295Q9C0D2 2601 aa19.15■□□□□ 0.66
PDLIM2-221ENST00000622702 C2orf74A8MZ97 194 aa19.14■□□□□ 0.65
PDLIM2-221ENST00000622702 K7EPI3 171 aa19.14■□□□□ 0.65
PDLIM2-221ENST00000622702 WDR47O94967 919 aa19.14■□□□□ 0.65
PDLIM2-221ENST00000622702 EEF1DP29692 281 aaKnown RBP19.14■□□□□ 0.65
PDLIM2-221ENST00000622702 CCL7P80098 99 aa19.14■□□□□ 0.65
PDLIM2-221ENST00000622702 SHC2P98077 582 aa19.14■□□□□ 0.65
PDLIM2-221ENST00000622702 ASPHQ12797 758 aa19.14■□□□□ 0.65
PDLIM2-221ENST00000622702 CLPPQ16740 277 aaPredicted RBP19.14■□□□□ 0.65
PDLIM2-221ENST00000622702 ZNF678Q5SXM1 525 aa19.14■□□□□ 0.65
PDLIM2-221ENST00000622702 PRAMEF13Q5VWM6 474 aa19.14■□□□□ 0.65
PDLIM2-221ENST00000622702 ARMC6Q6NXE6 501 aa19.14■□□□□ 0.65
PDLIM2-221ENST00000622702 LCTLQ6UWM7 567 aa19.14■□□□□ 0.65
PDLIM2-221ENST00000622702 TAX1BP1Q86VP1 789 aa19.14■□□□□ 0.65
PDLIM2-221ENST00000622702 THOC6Q86W42 341 aaKnown RBP19.14■□□□□ 0.65
PDLIM2-221ENST00000622702 OR2A1Q8NGT9 310 aa19.14■□□□□ 0.65
PDLIM2-221ENST00000622702 FLVCR1-AS1Q8TAF5 88 aa19.14■□□□□ 0.65
PDLIM2-221ENST00000622702 AHCYL2Q96HN2 611 aaKnown RBP19.14■□□□□ 0.65
PDLIM2-221ENST00000622702 OR4K3Q96R72 315 aa19.14■□□□□ 0.65
PDLIM2-221ENST00000622702 MIPEPQ99797 713 aa19.14■□□□□ 0.65
PDLIM2-221ENST00000622702 ACTR10Q9NZ32 417 aa19.14■□□□□ 0.65
PDLIM2-221ENST00000622702 OPTCQ9UBM4 332 aa19.14■□□□□ 0.65
PDLIM2-221ENST00000622702 CLCA2Q9UQC9 943 aa19.14■□□□□ 0.65
PDLIM2-221ENST00000622702 SLC22A14Q9Y267 594 aa19.14■□□□□ 0.65
PDLIM2-221ENST00000622702 NEUROG3Q9Y4Z2 214 aa19.14■□□□□ 0.65
PDLIM2-221ENST00000622702 PCDHB11Q9Y5F2 797 aa19.14■□□□□ 0.65
PDLIM2-221ENST00000622702 PCM1Q15154 2024 aa19.13■□□□□ 0.65
PDLIM2-221ENST00000622702 LRRC14BA6NHZ5 514 aa19.13■□□□□ 0.65
PDLIM2-221ENST00000622702 E2F3O00716 465 aa19.13■□□□□ 0.65
PDLIM2-221ENST00000622702 CCNT2O60583 730 aaKnown RBP19.13■□□□□ 0.65
PDLIM2-221ENST00000622702 FKBP9O95302 570 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms