RNA–Protein interactions for RNA: ENST00000622633.4

LITAF-221, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-221ENST00000622633 PBX3P40426 434 aa12.15□□□□□ -0.46
LITAF-221ENST00000622633 IL10RBQ08334 325 aa12.15□□□□□ -0.46
LITAF-221ENST00000622633 SERINC3Q13530 473 aa12.15□□□□□ -0.46
LITAF-221ENST00000622633 PLCL1Q15111 1095 aa12.15□□□□□ -0.46
LITAF-221ENST00000622633 LTB4RQ15722 352 aa12.15□□□□□ -0.46
LITAF-221ENST00000622633 SGCAQ16586 387 aa12.15□□□□□ -0.46
LITAF-221ENST00000622633 INTS11Q5TA45 600 aaKnown RBP12.15□□□□□ -0.46
LITAF-221ENST00000622633 PAQR3Q6TCH7 311 aa12.15□□□□□ -0.46
LITAF-221ENST00000622633 SCIMPQ6UWF3 145 aa12.15□□□□□ -0.46
LITAF-221ENST00000622633 LIPIQ6XZB0 460 aa12.15□□□□□ -0.46
LITAF-221ENST00000622633 CFAP77Q6ZQR2 320 aa12.15□□□□□ -0.46
LITAF-221ENST00000622633 IFNEQ86WN2 208 aa12.15□□□□□ -0.46
LITAF-221ENST00000622633 CAMK1DQ8IU85 385 aa12.15□□□□□ -0.46
LITAF-221ENST00000622633 MINDY1Q8N5J2 469 aa12.15□□□□□ -0.46
LITAF-221ENST00000622633 ZNF565Q8N9K5 539 aa12.15□□□□□ -0.46
LITAF-221ENST00000622633 OR7A2PQ8NGA2 310 aa12.15□□□□□ -0.46
LITAF-221ENST00000622633 GPR150Q8NGU9 434 aa12.15□□□□□ -0.46
LITAF-221ENST00000622633 DYNC2LI1Q8TCX1 351 aa12.15□□□□□ -0.46
LITAF-221ENST00000622633 DEDD2Q8WXF8 326 aa12.15□□□□□ -0.46
LITAF-221ENST00000622633 AKAP1Q92667 903 aaKnown RBP eCLIP12.15□□□□□ -0.462e-6■■■□□ 16.5
LITAF-221ENST00000622633 POLR1EQ9GZS1 481 aaKnown RBP12.15□□□□□ -0.46
LITAF-221ENST00000622633 TMEM168Q9H0V1 697 aa12.15□□□□□ -0.46
LITAF-221ENST00000622633 A0A1W2PRG6 482 aa12.15□□□□□ -0.46
LITAF-221ENST00000622633 SLC12A8A0AV02 714 aa12.15□□□□□ -0.46
LITAF-221ENST00000622633 OR6C65A6NJZ3 312 aa12.15□□□□□ -0.46
LITAF-221ENST00000622633 CRCPO75575 148 aa12.15□□□□□ -0.46
LITAF-221ENST00000622633 RHOBTB1O94844 696 aa12.15□□□□□ -0.46
LITAF-221ENST00000622633 ELK4P28324 431 aa12.15□□□□□ -0.46
LITAF-221ENST00000622633 OXTRP30559 389 aa12.15□□□□□ -0.46
LITAF-221ENST00000622633 TSPAN7P41732 249 aa12.15□□□□□ -0.46
LITAF-221ENST00000622633 SUOXP51687 545 aa12.15□□□□□ -0.46
LITAF-221ENST00000622633 SSTP61278 116 aa12.15□□□□□ -0.46
LITAF-221ENST00000622633 PRMT9Q6P2P2 845 aa12.15□□□□□ -0.46
LITAF-221ENST00000622633 TSPYL5Q86VY4 417 aaPredicted RBP12.15□□□□□ -0.46
LITAF-221ENST00000622633 CMTR2Q8IYT2 770 aaKnown RBP12.15□□□□□ -0.46
LITAF-221ENST00000622633 CFAP52Q8N1V2 620 aa12.15□□□□□ -0.46
LITAF-221ENST00000622633 DNAJB14Q8TBM8 379 aa12.15□□□□□ -0.46
LITAF-221ENST00000622633 TEX47Q8TBZ9 253 aa12.15□□□□□ -0.46
LITAF-221ENST00000622633 PHOSPHO2Q8TCD6 241 aa12.15□□□□□ -0.46
LITAF-221ENST00000622633 TEX37Q96LM6 180 aa12.15□□□□□ -0.46
LITAF-221ENST00000622633 SYT17Q9BSW7 474 aa12.15□□□□□ -0.46
LITAF-221ENST00000622633 FBXO44Q9H4M3 255 aa12.15□□□□□ -0.46
LITAF-221ENST00000622633 TFB2MQ9H5Q4 396 aaKnown RBP12.15□□□□□ -0.46
LITAF-221ENST00000622633 SDR39U1Q9NRG7 319 aaPredicted RBP12.15□□□□□ -0.46
LITAF-221ENST00000622633 MARCH2Q9P0N8 246 aa12.15□□□□□ -0.46
LITAF-221ENST00000622633 TRMT6Q9UJA5 497 aaKnown RBP12.15□□□□□ -0.46
LITAF-221ENST00000622633 NLRC5Q86WI3 1866 aa12.15□□□□□ -0.47
LITAF-221ENST00000622633 NCF1BA6NI72 391 aaPredicted RBP12.14□□□□□ -0.47
LITAF-221ENST00000622633 AQP12BA6NM10 295 aa12.14□□□□□ -0.47
LITAF-221ENST00000622633 NCF1CA8MVU1 366 aaPredicted RBP12.14□□□□□ -0.47
LITAF-221ENST00000622633 F8W036 122 aa12.14□□□□□ -0.47
LITAF-221ENST00000622633 KPNA5O15131 536 aa12.14□□□□□ -0.47
LITAF-221ENST00000622633 FGF1P05230 155 aa12.14□□□□□ -0.47
LITAF-221ENST00000622633 ACADMP11310 421 aa12.14□□□□□ -0.47
LITAF-221ENST00000622633 NCF1P14598 390 aaPredicted RBP12.14□□□□□ -0.47
LITAF-221ENST00000622633 PRDX3P30048 256 aaKnown RBP12.14□□□□□ -0.47
LITAF-221ENST00000622633 NKX3-2P78367 333 aa12.14□□□□□ -0.47
LITAF-221ENST00000622633 RELQ04864 619 aaPredicted RBP12.14□□□□□ -0.47
LITAF-221ENST00000622633 ZNF235Q14590 738 aa12.14□□□□□ -0.47
LITAF-221ENST00000622633 INPP5AQ14642 412 aa12.14□□□□□ -0.47
LITAF-221ENST00000622633 SETMARQ53H47 684 aaPredicted RBP12.14□□□□□ -0.47
LITAF-221ENST00000622633 RABL3Q5HYI8 236 aa12.14□□□□□ -0.47
LITAF-221ENST00000622633 C10orf120Q5SQS8 335 aa12.14□□□□□ -0.47
LITAF-221ENST00000622633 BLOC1S3Q6QNY0 202 aa12.14□□□□□ -0.47
LITAF-221ENST00000622633 AQP12AQ8IXF9 295 aa12.14□□□□□ -0.47
LITAF-221ENST00000622633 DCP1BQ8IZD4 617 aaKnown RBP12.14□□□□□ -0.47
LITAF-221ENST00000622633 FBXO39Q8N4B4 442 aa12.14□□□□□ -0.47
LITAF-221ENST00000622633 RHEBL1Q8TAI7 183 aa12.14□□□□□ -0.47
LITAF-221ENST00000622633 CDKN2AIPNLQ96HQ2 116 aa12.14□□□□□ -0.47
LITAF-221ENST00000622633 SMIM14Q96QK8 99 aa12.14□□□□□ -0.47
LITAF-221ENST00000622633 SLIRPQ9GZT3 109 aaKnown RBP12.14□□□□□ -0.47
LITAF-221ENST00000622633 SLC52A3Q9NQ40 469 aa12.14□□□□□ -0.47
LITAF-221ENST00000622633 AGO1Q9UL18 857 aaKnown RBP12.14□□□□□ -0.47
LITAF-221ENST00000622633 PRG3Q9Y2Y8 225 aaPredicted RBP12.14□□□□□ -0.47
LITAF-221ENST00000622633 PRELID3BQ9Y3B1 194 aa12.14□□□□□ -0.47
LITAF-221ENST00000622633 PTPRDP23468 1912 aa12.14□□□□□ -0.47
LITAF-221ENST00000622633 DRGXA6NNA5 263 aa12.14□□□□□ -0.47
LITAF-221ENST00000622633 CDC7O00311 574 aa12.14□□□□□ -0.47
LITAF-221ENST00000622633 ARPC2O15144 300 aa12.14□□□□□ -0.47
LITAF-221ENST00000622633 INPP4BO15327 924 aa12.14□□□□□ -0.47
LITAF-221ENST00000622633 ECI2O75521 394 aa12.14□□□□□ -0.47
LITAF-221ENST00000622633 GABARAPO95166 117 aa12.14□□□□□ -0.47
LITAF-221ENST00000622633 IGHA2P01877 340 aa12.14□□□□□ -0.47
LITAF-221ENST00000622633 HSD17B1P14061 328 aa12.14□□□□□ -0.47
LITAF-221ENST00000622633 NCK1P16333 377 aa12.14□□□□□ -0.47
LITAF-221ENST00000622633 ZNF30P17039 623 aa12.14□□□□□ -0.47
LITAF-221ENST00000622633 HLA-DPA1P20036 260 aa12.14□□□□□ -0.47
LITAF-221ENST00000622633 FASP25445 335 aa12.14□□□□□ -0.47
LITAF-221ENST00000622633 ALDH4A1P30038 563 aa12.14□□□□□ -0.47
LITAF-221ENST00000622633 CAPGP40121 348 aa12.14□□□□□ -0.47
LITAF-221ENST00000622633 OR1G1P47890 313 aa12.14□□□□□ -0.47
LITAF-221ENST00000622633 AGTR2P50052 363 aa12.14□□□□□ -0.47
LITAF-221ENST00000622633 STC1P52823 247 aa12.14□□□□□ -0.47
LITAF-221ENST00000622633 CYP4F2P78329 520 aa12.14□□□□□ -0.47
LITAF-221ENST00000622633 CYP4F3Q08477 520 aa12.14□□□□□ -0.47
LITAF-221ENST00000622633 FAPQ12884 760 aa12.14□□□□□ -0.47
LITAF-221ENST00000622633 LCP2Q13094 533 aa12.14□□□□□ -0.47
LITAF-221ENST00000622633 GPR50Q13585 617 aa12.14□□□□□ -0.47
LITAF-221ENST00000622633 EFR3AQ14156 821 aa12.14□□□□□ -0.47
LITAF-221ENST00000622633 TSNQ15631 228 aaKnown RBP12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms