RNA–Protein interactions for RNA: ENST00000622166.1

IGHV3-54-201, Transcript of immunoglobulin heavy variable 3-54 (pseudogene), humanhuman

BASIC

Gene IGHV3-54, Length 353 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-54-201ENST00000622166 JUPP14923 745 aa9.35□□□□□ -0.91
IGHV3-54-201ENST00000622166 JUNDP17535 347 aa9.35□□□□□ -0.91
IGHV3-54-201ENST00000622166 PFKLP17858 780 aa9.35□□□□□ -0.91
IGHV3-54-201ENST00000622166 GPX2P18283 190 aa9.35□□□□□ -0.91
IGHV3-54-201ENST00000622166 PRPS1L1P21108 318 aa9.35□□□□□ -0.91
IGHV3-54-201ENST00000622166 PCMT1P22061 227 aa9.35□□□□□ -0.91
IGHV3-54-201ENST00000622166 TACR1P25103 407 aa9.35□□□□□ -0.91
IGHV3-54-201ENST00000622166 ACVR2AP27037 513 aa9.35□□□□□ -0.91
IGHV3-54-201ENST00000622166 CD70P32970 193 aa9.35□□□□□ -0.91
IGHV3-54-201ENST00000622166 CDKN2CP42773 168 aa9.35□□□□□ -0.91
IGHV3-54-201ENST00000622166 PLA2G16P53816 162 aa9.35□□□□□ -0.91
IGHV3-54-201ENST00000622166 C21orf59P57076 290 aa9.35□□□□□ -0.91
IGHV3-54-201ENST00000622166 CXCR4P61073 352 aa9.35□□□□□ -0.91
IGHV3-54-201ENST00000622166 PTSQ03393 145 aa9.35□□□□□ -0.91
IGHV3-54-201ENST00000622166 SRSF11Q05519 484 aaKnown RBP9.35□□□□□ -0.91
IGHV3-54-201ENST00000622166 VAC14Q08AM6 782 aa9.35□□□□□ -0.91
IGHV3-54-201ENST00000622166 BNIP3Q12983 259 aa9.35□□□□□ -0.91
IGHV3-54-201ENST00000622166 CDK5R2Q13319 367 aa9.35□□□□□ -0.91
IGHV3-54-201ENST00000622166 KCNC3Q14003 757 aa9.35□□□□□ -0.91
IGHV3-54-201ENST00000622166 KEAP1Q14145 624 aa9.35□□□□□ -0.91
IGHV3-54-201ENST00000622166 CPSF6Q16630 551 aaKnown RBP eCLIP9.35□□□□□ -0.91
IGHV3-54-201ENST00000622166 PTCHD3Q3KNS1 767 aa9.35□□□□□ -0.91
IGHV3-54-201ENST00000622166 ATP13A5Q4VNC0 1218 aa9.35□□□□□ -0.91
IGHV3-54-201ENST00000622166 PRAMEF9Q5VWM5 478 aa9.35□□□□□ -0.91
IGHV3-54-201ENST00000622166 LIPJQ5W064 366 aa9.35□□□□□ -0.91
IGHV3-54-201ENST00000622166 LRRC66Q68CR7 880 aa9.35□□□□□ -0.91
IGHV3-54-201ENST00000622166 TXNDC8Q6A555 127 aa9.35□□□□□ -0.91
IGHV3-54-201ENST00000622166 NOXRED1Q6NXP6 359 aa9.35□□□□□ -0.91
IGHV3-54-201ENST00000622166 NEK5Q6P3R8 708 aa9.35□□□□□ -0.91
IGHV3-54-201ENST00000622166 C22orf39Q6P5X5 142 aa9.35□□□□□ -0.91
IGHV3-54-201ENST00000622166 XKR5Q6UX68 686 aa9.35□□□□□ -0.91
IGHV3-54-201ENST00000622166 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.35□□□□□ -0.91
IGHV3-54-201ENST00000622166 SLC16A12Q6ZSM3 486 aa9.35□□□□□ -0.91
IGHV3-54-201ENST00000622166 USP45Q70EL2 814 aa9.35□□□□□ -0.91
IGHV3-54-201ENST00000622166 ZNF551Q7Z340 670 aaPredicted RBP9.35□□□□□ -0.91
IGHV3-54-201ENST00000622166 ZDHHC21Q8IVQ6 265 aa9.35□□□□□ -0.91
IGHV3-54-201ENST00000622166 ZC3H7AQ8IWR0 971 aaKnown RBP9.35□□□□□ -0.91
IGHV3-54-201ENST00000622166 ZZZ3Q8IYH5 903 aa9.35□□□□□ -0.91
IGHV3-54-201ENST00000622166 REM2Q8IYK8 340 aaPredicted RBP9.35□□□□□ -0.91
IGHV3-54-201ENST00000622166 C10orf111Q8N326 155 aa9.35□□□□□ -0.91
IGHV3-54-201ENST00000622166 PAF1Q8N7H5 531 aa9.35□□□□□ -0.91
IGHV3-54-201ENST00000622166 SLAIN1Q8ND83 568 aa9.35□□□□□ -0.91
IGHV3-54-201ENST00000622166 CSGALNACT1Q8TDX6 532 aa9.35□□□□□ -0.91
IGHV3-54-201ENST00000622166 FRS2Q8WU20 508 aa9.35□□□□□ -0.91
IGHV3-54-201ENST00000622166 MTFMTQ96DP5 389 aaKnown RBP9.35□□□□□ -0.91
IGHV3-54-201ENST00000622166 APIPQ96GX9 242 aa9.35□□□□□ -0.91
IGHV3-54-201ENST00000622166 METTL2AQ96IZ6 378 aaKnown RBP9.35□□□□□ -0.91
IGHV3-54-201ENST00000622166 CCDC138Q96M89 665 aa9.35□□□□□ -0.91
IGHV3-54-201ENST00000622166 ZNF641Q96N77 438 aaPredicted RBP9.35□□□□□ -0.91
IGHV3-54-201ENST00000622166 ZNF558Q96NG5 402 aa9.35□□□□□ -0.91
IGHV3-54-201ENST00000622166 NODALQ96S42 347 aa9.35□□□□□ -0.91
IGHV3-54-201ENST00000622166 FAM83CQ9BQN1 747 aa9.35□□□□□ -0.91
IGHV3-54-201ENST00000622166 SPATA9Q9BWV2 254 aa9.35□□□□□ -0.91
IGHV3-54-201ENST00000622166 CEP44Q9C0F1 390 aa9.35□□□□□ -0.91
IGHV3-54-201ENST00000622166 RAD21L1Q9H4I0 556 aa9.35□□□□□ -0.91
IGHV3-54-201ENST00000622166 ELOVL6Q9H5J4 265 aa9.35□□□□□ -0.91
IGHV3-54-201ENST00000622166 VNN3Q9NY84 501 aa9.35□□□□□ -0.91
IGHV3-54-201ENST00000622166 ENPP5Q9UJA9 477 aa9.35□□□□□ -0.91
IGHV3-54-201ENST00000622166 RPS6KA6Q9UK32 745 aa9.35□□□□□ -0.91
IGHV3-54-201ENST00000622166 TMPRSS11EQ9UL52 423 aa9.35□□□□□ -0.91
IGHV3-54-201ENST00000622166 ABT1Q9ULW3 272 aaKnown RBP9.35□□□□□ -0.91
IGHV3-54-201ENST00000622166 CLEC4EQ9ULY5 219 aa9.35□□□□□ -0.91
IGHV3-54-201ENST00000622166 HS3ST2Q9Y278 367 aa9.35□□□□□ -0.91
IGHV3-54-201ENST00000622166 BPTFQ12830 3046 aa9.34□□□□□ -0.91
IGHV3-54-201ENST00000622166 SOBPA7XYQ1 873 aa9.34□□□□□ -0.91
IGHV3-54-201ENST00000622166 ZNF99A8MXY4 864 aaPredicted RBP9.34□□□□□ -0.91
IGHV3-54-201ENST00000622166 RFXANKO14593 260 aa9.34□□□□□ -0.91
IGHV3-54-201ENST00000622166 SCAMP3O14828 347 aaKnown RBP9.34□□□□□ -0.91
IGHV3-54-201ENST00000622166 FOXD2O60548 495 aaPredicted RBP9.34□□□□□ -0.91
IGHV3-54-201ENST00000622166 SCN2BO60939 215 aa9.34□□□□□ -0.91
IGHV3-54-201ENST00000622166 NDUFS2O75306 463 aa9.34□□□□□ -0.91
IGHV3-54-201ENST00000622166 BCAS1O75363 584 aaPredicted RBP9.34□□□□□ -0.91
IGHV3-54-201ENST00000622166 E2F6O75461 281 aa9.34□□□□□ -0.91
IGHV3-54-201ENST00000622166 POP4O95707 220 aaKnown RBP9.34□□□□□ -0.91
IGHV3-54-201ENST00000622166 GSNP06396 782 aa9.34□□□□□ -0.91
IGHV3-54-201ENST00000622166 HIST1H2AGP0C0S8 130 aaPredicted RBP9.34□□□□□ -0.91
IGHV3-54-201ENST00000622166 MYCLP1P12525 358 aaPredicted RBP9.34□□□□□ -0.91
IGHV3-54-201ENST00000622166 HSD3B1P14060 373 aa9.34□□□□□ -0.91
IGHV3-54-201ENST00000622166 ZNF182P17025 639 aaPredicted RBP9.34□□□□□ -0.91
IGHV3-54-201ENST00000622166 HIST1H2ADP20671 130 aa9.34□□□□□ -0.91
IGHV3-54-201ENST00000622166 CYP2A7P20853 494 aa9.34□□□□□ -0.91
IGHV3-54-201ENST00000622166 FPR1P21462 350 aa9.34□□□□□ -0.91
IGHV3-54-201ENST00000622166 AGXTP21549 392 aa9.34□□□□□ -0.91
IGHV3-54-201ENST00000622166 PRKACGP22612 351 aa9.34□□□□□ -0.91
IGHV3-54-201ENST00000622166 LHCGRP22888 699 aa9.34□□□□□ -0.91
IGHV3-54-201ENST00000622166 HSD3B2P26439 372 aa9.34□□□□□ -0.91
IGHV3-54-201ENST00000622166 SPINT3P49223 89 aa9.34□□□□□ -0.91
IGHV3-54-201ENST00000622166 BMXP51813 675 aa9.34□□□□□ -0.91
IGHV3-54-201ENST00000622166 NEK2P51955 445 aa9.34□□□□□ -0.91
IGHV3-54-201ENST00000622166 GP2P55259 537 aaKnown RBP9.34□□□□□ -0.91
IGHV3-54-201ENST00000622166 WNT3P56703 355 aa9.34□□□□□ -0.91
IGHV3-54-201ENST00000622166 GSTM4Q03013 218 aa9.34□□□□□ -0.91
IGHV3-54-201ENST00000622166 NOGQ13253 232 aa9.34□□□□□ -0.91
IGHV3-54-201ENST00000622166 SPIDRQ14159 915 aa9.34□□□□□ -0.91
IGHV3-54-201ENST00000622166 VMACQ2NL98 169 aa9.34□□□□□ -0.91
IGHV3-54-201ENST00000622166 PGS1Q32NB8 556 aa9.34□□□□□ -0.91
IGHV3-54-201ENST00000622166 ANKDD1AQ495B1 522 aa9.34□□□□□ -0.91
IGHV3-54-201ENST00000622166 CARD16Q5EG05 197 aa9.34□□□□□ -0.91
IGHV3-54-201ENST00000622166 FRG2Q64ET8 278 aa9.34□□□□□ -0.91
IGHV3-54-201ENST00000622166 KDM4DQ6B0I6 523 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms