RNA–Protein interactions for RNA: ENST00000621897.1

BRCA1-229, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 375 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-229ENST00000621897 HOXD13P35453 343 aa3.7□□□□□ -1.82
BRCA1-229ENST00000621897 MMP12P39900 470 aa3.7□□□□□ -1.82
BRCA1-229ENST00000621897 HNF4AP41235 474 aa3.7□□□□□ -1.82
BRCA1-229ENST00000621897 PAX9P55771 341 aa3.7□□□□□ -1.82
BRCA1-229ENST00000621897 TAF10Q12962 218 aa3.7□□□□□ -1.82
BRCA1-229ENST00000621897 PPP2R5CQ13362 524 aa3.7□□□□□ -1.82
BRCA1-229ENST00000621897 HERC3Q15034 1050 aa3.7□□□□□ -1.82
BRCA1-229ENST00000621897 NECTIN1Q15223 517 aa3.7□□□□□ -1.82
BRCA1-229ENST00000621897 HLA-BQ31612 363 aa3.7□□□□□ -1.82
BRCA1-229ENST00000621897 PARP10Q53GL7 1025 aa3.7□□□□□ -1.82
BRCA1-229ENST00000621897 C2CD6Q53TS8 623 aa3.7□□□□□ -1.82
BRCA1-229ENST00000621897 CFAP58Q5T655 872 aa3.7□□□□□ -1.82
BRCA1-229ENST00000621897 RNASEH2BQ5TBB1 312 aaKnown RBP3.7□□□□□ -1.82
BRCA1-229ENST00000621897 C20orf194Q5TEA3 1177 aa3.7□□□□□ -1.82
BRCA1-229ENST00000621897 FAM205BPQ63HN1 556 aa3.7□□□□□ -1.82
BRCA1-229ENST00000621897 PAQR6Q6TCH4 344 aa3.7□□□□□ -1.82
BRCA1-229ENST00000621897 FIP1L1Q6UN15 594 aaKnown RBP3.7□□□□□ -1.82
BRCA1-229ENST00000621897 TMEM207Q6UWW9 146 aa3.7□□□□□ -1.82
BRCA1-229ENST00000621897 ABRAXAS1Q6UWZ7 409 aa3.7□□□□□ -1.82
BRCA1-229ENST00000621897 ENOSF1Q7L5Y1 443 aa3.7□□□□□ -1.82
BRCA1-229ENST00000621897 KRT74Q7RTS7 529 aa3.7□□□□□ -1.82
BRCA1-229ENST00000621897 CATSPER4Q7RTX7 472 aa3.7□□□□□ -1.82
BRCA1-229ENST00000621897 TMPRSS11BQ86T26 416 aa3.7□□□□□ -1.82
BRCA1-229ENST00000621897 LRRTM1Q86UE6 522 aa3.7□□□□□ -1.82
BRCA1-229ENST00000621897 TMEM173Q86WV6 379 aaPredicted RBP3.7□□□□□ -1.82
BRCA1-229ENST00000621897 LINC00346Q8IVM7 164 aa3.7□□□□□ -1.82
BRCA1-229ENST00000621897 SMAP2Q8WU79 429 aaPredicted RBP3.7□□□□□ -1.82
BRCA1-229ENST00000621897 N4BP2L2Q92802 583 aaPredicted RBP3.7□□□□□ -1.82
BRCA1-229ENST00000621897 CFAP53Q96M91 514 aa3.7□□□□□ -1.82
BRCA1-229ENST00000621897 RAD9AQ99638 391 aa3.7□□□□□ -1.82
BRCA1-229ENST00000621897 URM1Q9BTM9 101 aaKnown RBP3.7□□□□□ -1.82
BRCA1-229ENST00000621897 DGCR6LQ9BY27 220 aa3.7□□□□□ -1.82
BRCA1-229ENST00000621897 OR2B2Q9GZK3 357 aa3.7□□□□□ -1.82
BRCA1-229ENST00000621897 MMP27Q9H306 513 aa3.7□□□□□ -1.82
BRCA1-229ENST00000621897 OSGEPL1Q9H4B0 414 aa3.7□□□□□ -1.82
BRCA1-229ENST00000621897 PANK4Q9NVE7 773 aa3.7□□□□□ -1.82
BRCA1-229ENST00000621897 PSD3Q9NYI0 1048 aa3.7□□□□□ -1.82
BRCA1-229ENST00000621897 CFDP1Q9UEE9 299 aaPredicted RBP3.7□□□□□ -1.82
BRCA1-229ENST00000621897 KLK13Q9UKR3 277 aa3.7□□□□□ -1.82
BRCA1-229ENST00000621897 GRID1Q9ULK0 1009 aa3.7□□□□□ -1.82
BRCA1-229ENST00000621897 PPP1R3CQ9UQK1 317 aa3.7□□□□□ -1.82
BRCA1-229ENST00000621897 AGRNO00468 2067 aa3.7□□□□□ -1.82
BRCA1-229ENST00000621897 TSPY2A6NKD2 308 aa3.69□□□□□ -1.82
BRCA1-229ENST00000621897 H7C0S8 307 aa3.69□□□□□ -1.82
BRCA1-229ENST00000621897 DNTTP04053 509 aa3.69□□□□□ -1.82
BRCA1-229ENST00000621897 TRIM49P0CI25 452 aa3.69□□□□□ -1.82
BRCA1-229ENST00000621897 TRIM49CP0CI26 452 aa3.69□□□□□ -1.82
BRCA1-229ENST00000621897 TSPY3P0CV98 308 aa3.69□□□□□ -1.82
BRCA1-229ENST00000621897 TSPY8P0CW00 308 aa3.69□□□□□ -1.82
BRCA1-229ENST00000621897 AKR1B1P15121 316 aa3.69□□□□□ -1.82
BRCA1-229ENST00000621897 GJA1P17302 382 aa3.69□□□□□ -1.82
BRCA1-229ENST00000621897 JAK1P23458 1154 aa3.69□□□□□ -1.82
BRCA1-229ENST00000621897 DNASE1P24855 282 aa3.69□□□□□ -1.82
BRCA1-229ENST00000621897 CASQ1P31415 396 aa3.69□□□□□ -1.82
BRCA1-229ENST00000621897 NOVP48745 357 aa3.69□□□□□ -1.82
BRCA1-229ENST00000621897 MAZP56270 477 aaKnown RBP3.69□□□□□ -1.82
BRCA1-229ENST00000621897 HERV-K104P61576 105 aa3.69□□□□□ -1.82
BRCA1-229ENST00000621897 TSPY1Q01534 308 aa3.69□□□□□ -1.82
BRCA1-229ENST00000621897 PCLAFQ15004 111 aa3.69□□□□□ -1.82
BRCA1-229ENST00000621897 NBPF5PQ86XG9 351 aaPredicted RBP3.69□□□□□ -1.82
BRCA1-229ENST00000621897 ZNF595Q8IYB9 648 aa3.69□□□□□ -1.82
BRCA1-229ENST00000621897 NIPA2Q8N8Q9 360 aa3.69□□□□□ -1.82
BRCA1-229ENST00000621897 OR10G8Q8NGN5 311 aa3.69□□□□□ -1.82
BRCA1-229ENST00000621897 VANGL1Q8TAA9 524 aaPredicted RBP3.69□□□□□ -1.82
BRCA1-229ENST00000621897 ZNF519Q8TB69 540 aa3.69□□□□□ -1.82
BRCA1-229ENST00000621897 CCDC107Q8WV48 283 aa3.69□□□□□ -1.82
BRCA1-229ENST00000621897 SNX21Q969T3 373 aa3.69□□□□□ -1.82
BRCA1-229ENST00000621897 RADILQ96JH8 1075 aa3.69□□□□□ -1.82
BRCA1-229ENST00000621897 KRT12Q99456 494 aa3.69□□□□□ -1.82
BRCA1-229ENST00000621897 UPF3AQ9H1J1 476 aaKnown RBP3.69□□□□□ -1.82
BRCA1-229ENST00000621897 ZWILCHQ9H900 591 aa3.69□□□□□ -1.82
BRCA1-229ENST00000621897 HAUS2Q9NVX0 235 aa3.69□□□□□ -1.82
BRCA1-229ENST00000621897 WDR35Q9P2L0 1181 aa3.69□□□□□ -1.82
BRCA1-229ENST00000621897 TBC1D29Q9UFV1 150 aa3.69□□□□□ -1.82
BRCA1-229ENST00000621897 RABL2BQ9UNT1 228 aa3.69□□□□□ -1.82
BRCA1-229ENST00000621897 NME7Q9Y5B8 376 aa3.69□□□□□ -1.82
BRCA1-229ENST00000621897 GPR75-ASB3A0A0A6YYF3 556 aa3.68□□□□□ -1.82
BRCA1-229ENST00000621897 P4HA2O15460 535 aa3.68□□□□□ -1.82
BRCA1-229ENST00000621897 AHCYL1O43865 530 aa3.68□□□□□ -1.82
BRCA1-229ENST00000621897 MAGEC1O60732 1142 aa3.68□□□□□ -1.82
BRCA1-229ENST00000621897 SMIM18P0DKX4 95 aa3.68□□□□□ -1.82
BRCA1-229ENST00000621897 ACADSP16219 412 aa3.68□□□□□ -1.82
BRCA1-229ENST00000621897 CDH3P22223 829 aa3.68□□□□□ -1.82
BRCA1-229ENST00000621897 UGT1A4P22310 534 aa3.68□□□□□ -1.82
BRCA1-229ENST00000621897 MNDAP41218 407 aa3.68□□□□□ -1.82
BRCA1-229ENST00000621897 RPL21P46778 160 aaKnown RBP3.68□□□□□ -1.82
BRCA1-229ENST00000621897 CDH13P55290 713 aa3.68□□□□□ -1.82
BRCA1-229ENST00000621897 MAT1AQ00266 395 aaKnown RBP3.68□□□□□ -1.82
BRCA1-229ENST00000621897 SCARB2Q14108 478 aa3.68□□□□□ -1.82
BRCA1-229ENST00000621897 CA9Q16790 459 aa3.68□□□□□ -1.82
BRCA1-229ENST00000621897 ARMC4Q5T2S8 1044 aa3.68□□□□□ -1.82
BRCA1-229ENST00000621897 SLC25A47Q6Q0C1 308 aa3.68□□□□□ -1.82
BRCA1-229ENST00000621897 P2RY8Q86VZ1 359 aa3.68□□□□□ -1.82
BRCA1-229ENST00000621897 VSIG1Q86XK7 387 aa3.68□□□□□ -1.82
BRCA1-229ENST00000621897 GUF1Q8N442 669 aaKnown RBP3.68□□□□□ -1.82
BRCA1-229ENST00000621897 CARNMT1Q8N4J0 409 aa3.68□□□□□ -1.82
BRCA1-229ENST00000621897 AMER3Q8N944 861 aa3.68□□□□□ -1.82
BRCA1-229ENST00000621897 PRSS33Q8NF86 280 aa3.68□□□□□ -1.82
BRCA1-229ENST00000621897 LPGAT1Q92604 370 aa3.68□□□□□ -1.82
BRCA1-229ENST00000621897 ARHGAP45Q92619 1136 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms