RNA–Protein interactions for RNA: ENST00000621676.4

VPS11-208, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS11, Length 3,313 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-208ENST00000621676 RPL26P61254 145 aaKnown RBP10.22□□□□□ -0.77
VPS11-208ENST00000621676 SELPLGQ14242 412 aa10.22□□□□□ -0.77
VPS11-208ENST00000621676 SLBPQ14493 270 aaKnown RBP eCLIP10.22□□□□□ -0.77
VPS11-208ENST00000621676 OR4F3Q6IEY1 312 aa10.22□□□□□ -0.77
VPS11-208ENST00000621676 LARP4Q71RC2 724 aaKnown RBP eCLIP10.22□□□□□ -0.77
VPS11-208ENST00000621676 C1orf52Q8N6N3 182 aaKnown RBP10.22□□□□□ -0.77
VPS11-208ENST00000621676 FIG4Q92562 907 aa10.22□□□□□ -0.77
VPS11-208ENST00000621676 COL26A1Q96A83 441 aa10.22□□□□□ -0.77
VPS11-208ENST00000621676 RBCK1Q9BYM8 510 aa10.22□□□□□ -0.77
VPS11-208ENST00000621676 DPY30Q9C005 99 aa10.22□□□□□ -0.77
VPS11-208ENST00000621676 BTBD1Q9H0C5 482 aa10.22□□□□□ -0.77
VPS11-208ENST00000621676 TRIM39Q9HCM9 518 aa10.22□□□□□ -0.77
VPS11-208ENST00000621676 EBF1Q9UH73 591 aa10.22□□□□□ -0.77
VPS11-208ENST00000621676 RPL26L1Q9UNX3 145 aaKnown RBP10.22□□□□□ -0.77
VPS11-208ENST00000621676 SNX13Q9Y5W8 968 aa10.22□□□□□ -0.77
VPS11-208ENST00000621676 MED12Q93074 2177 aa10.22□□□□□ -0.77
VPS11-208ENST00000621676 NBASA2RRP1 2371 aa10.22□□□□□ -0.77
VPS11-208ENST00000621676 GBF1Q92538 1859 aa10.22□□□□□ -0.77
VPS11-208ENST00000621676 DIRAS1O95057 198 aa10.22□□□□□ -0.77
VPS11-208ENST00000621676 RPS17P08708 135 aaKnown RBP10.22□□□□□ -0.77
VPS11-208ENST00000621676 IMPA1P29218 277 aa10.22□□□□□ -0.77
VPS11-208ENST00000621676 PTDSS1P48651 473 aaKnown RBP10.22□□□□□ -0.77
VPS11-208ENST00000621676 PRKAG1P54619 331 aa10.22□□□□□ -0.77
VPS11-208ENST00000621676 CAMK2GQ13555 558 aaPredicted RBP10.22□□□□□ -0.77
VPS11-208ENST00000621676 GAS6Q14393 721 aa10.22□□□□□ -0.77
VPS11-208ENST00000621676 CLCA4Q14CN2 919 aa10.22□□□□□ -0.77
VPS11-208ENST00000621676 CYP20A1Q6UW02 462 aa10.22□□□□□ -0.77
VPS11-208ENST00000621676 BNC2Q6ZN30 1099 aaPredicted RBP10.22□□□□□ -0.77
VPS11-208ENST00000621676 METTL3Q86U44 580 aaKnown RBP10.22□□□□□ -0.77
VPS11-208ENST00000621676 METTL27Q8N6F8 245 aaPredicted RBP10.22□□□□□ -0.77
VPS11-208ENST00000621676 DPH2Q9BQC3 489 aaPredicted RBP10.22□□□□□ -0.77
VPS11-208ENST00000621676 ACPTQ9BZG2 426 aa10.22□□□□□ -0.77
VPS11-208ENST00000621676 ABCG4Q9H172 646 aa10.22□□□□□ -0.77
VPS11-208ENST00000621676 ALG2Q9H553 416 aa10.22□□□□□ -0.77
VPS11-208ENST00000621676 SLC6A13Q9NSD5 602 aa10.22□□□□□ -0.77
VPS11-208ENST00000621676 B4DGG1 531 aa10.21□□□□□ -0.77
VPS11-208ENST00000621676 DFNA5O60443 496 aa10.21□□□□□ -0.77
VPS11-208ENST00000621676 SLC22A3O75751 556 aa10.21□□□□□ -0.77
VPS11-208ENST00000621676 CPOXP36551 454 aa10.21□□□□□ -0.77
VPS11-208ENST00000621676 MTHFRP42898 656 aa10.21□□□□□ -0.77
VPS11-208ENST00000621676 GSSP48637 474 aa10.21□□□□□ -0.77
VPS11-208ENST00000621676 ID2Q02363 134 aa10.21□□□□□ -0.77
VPS11-208ENST00000621676 CLECL1Q8IZS7 167 aa10.21□□□□□ -0.77
VPS11-208ENST00000621676 RHEBL1Q8TAI7 183 aa10.21□□□□□ -0.77
VPS11-208ENST00000621676 RSRC1Q96IZ7 334 aaKnown RBP10.21□□□□□ -0.77
VPS11-208ENST00000621676 SLC32A1Q9H598 525 aa10.21□□□□□ -0.77
VPS11-208ENST00000621676 PTBP2Q9UKA9 531 aaKnown RBP10.21□□□□□ -0.77
VPS11-208ENST00000621676 ACSL6Q9UKU0 697 aa10.21□□□□□ -0.77
VPS11-208ENST00000621676 ZFC3H1O60293 1989 aaKnown RBP10.21□□□□□ -0.78
VPS11-208ENST00000621676 PI4KAP42356 2102 aa10.21□□□□□ -0.78
VPS11-208ENST00000621676 OR1F1O43749 312 aa10.21□□□□□ -0.78
VPS11-208ENST00000621676 TIPRLO75663 272 aa10.21□□□□□ -0.78
VPS11-208ENST00000621676 SEC24DO94855 1032 aaPredicted RBP10.21□□□□□ -0.78
VPS11-208ENST00000621676 MLYCDO95822 493 aa10.21□□□□□ -0.78
VPS11-208ENST00000621676 UROSP10746 265 aa10.21□□□□□ -0.78
VPS11-208ENST00000621676 EPORP19235 508 aa10.21□□□□□ -0.78
VPS11-208ENST00000621676 YAP1P46937 504 aaKnown RBP10.21□□□□□ -0.78
VPS11-208ENST00000621676 OLR1P78380 273 aa10.21□□□□□ -0.78
VPS11-208ENST00000621676 WDR53Q7Z5U6 358 aaPredicted RBP10.21□□□□□ -0.78
VPS11-208ENST00000621676 GALNT13Q8IUC8 556 aa10.21□□□□□ -0.78
VPS11-208ENST00000621676 CNPY4Q8N129 248 aa10.21□□□□□ -0.78
VPS11-208ENST00000621676 FAM46DQ8NEK8 389 aa10.21□□□□□ -0.78
VPS11-208ENST00000621676 OR13H1Q8NG92 308 aa10.21□□□□□ -0.78
VPS11-208ENST00000621676 ZCCHC10Q8TBK6 192 aa10.21□□□□□ -0.78
VPS11-208ENST00000621676 ELSPBP1Q96BH3 223 aa10.21□□□□□ -0.78
VPS11-208ENST00000621676 F2RL3Q96RI0 385 aa10.21□□□□□ -0.78
VPS11-208ENST00000621676 INSM2Q96T92 566 aaPredicted RBP10.21□□□□□ -0.78
VPS11-208ENST00000621676 INPP5KQ9BT40 448 aa10.21□□□□□ -0.78
VPS11-208ENST00000621676 LRTM1Q9HBL6 345 aa10.21□□□□□ -0.78
VPS11-208ENST00000621676 DNAJC11Q9NVH1 559 aa10.21□□□□□ -0.78
VPS11-208ENST00000621676 DMXL1Q9Y485 3027 aa10.21□□□□□ -0.78
VPS11-208ENST00000621676 SAC3D1A6NKF1 404 aa10.2□□□□□ -0.78
VPS11-208ENST00000621676 KLK1P06870 262 aa10.2□□□□□ -0.78
VPS11-208ENST00000621676 UBTFL6P0CB48 400 aaPredicted RBP10.2□□□□□ -0.78
VPS11-208ENST00000621676 ZCCHC18P0CG32 403 aa10.2□□□□□ -0.78
VPS11-208ENST00000621676 POLR2CP19387 275 aaPredicted RBP10.2□□□□□ -0.78
VPS11-208ENST00000621676 IGFALSP35858 605 aa10.2□□□□□ -0.78
VPS11-208ENST00000621676 CSNK1DP48730 415 aa10.2□□□□□ -0.78
VPS11-208ENST00000621676 PFN3P60673 137 aa10.2□□□□□ -0.78
VPS11-208ENST00000621676 PPP1CAP62136 330 aa10.2□□□□□ -0.78
VPS11-208ENST00000621676 RPS26P62854 115 aaKnown RBP10.2□□□□□ -0.78
VPS11-208ENST00000621676 LAPTM5Q13571 262 aa10.2□□□□□ -0.78
VPS11-208ENST00000621676 EIF4HQ15056 248 aaKnown RBP10.2□□□□□ -0.78
VPS11-208ENST00000621676 Q6ZSR6 202 aa10.2□□□□□ -0.78
VPS11-208ENST00000621676 C11orf74Q86VG3 221 aa10.2□□□□□ -0.78
VPS11-208ENST00000621676 SYT12Q8IV01 421 aa10.2□□□□□ -0.78
VPS11-208ENST00000621676 GPR65Q8IYL9 337 aa10.2□□□□□ -0.78
VPS11-208ENST00000621676 OR2I1PQ8NGU4 316 aa10.2□□□□□ -0.78
VPS11-208ENST00000621676 OR10A6Q8NH74 314 aa10.2□□□□□ -0.78
VPS11-208ENST00000621676 COQ10AQ96MF6 247 aa10.2□□□□□ -0.78
VPS11-208ENST00000621676 YIPF4Q9BSR8 244 aa10.2□□□□□ -0.78
VPS11-208ENST00000621676 SOX17Q9H6I2 414 aaPredicted RBP10.2□□□□□ -0.78
VPS11-208ENST00000621676 SPHK1Q9NYA1 384 aa10.2□□□□□ -0.78
VPS11-208ENST00000621676 VTI1BQ9UEU0 232 aa10.2□□□□□ -0.78
VPS11-208ENST00000621676 TBC1D29Q9UFV1 150 aa10.2□□□□□ -0.78
VPS11-208ENST00000621676 NCKAP1Q9Y2A7 1128 aa10.2□□□□□ -0.78
VPS11-208ENST00000621676 OARD1Q9Y530 152 aa10.2□□□□□ -0.78
VPS11-208ENST00000621676 KIF26AQ9ULI4 1882 aaPredicted RBP10.2□□□□□ -0.78
VPS11-208ENST00000621676 TRBV5-4A0A0C4DH59 114 aa10.2□□□□□ -0.78
VPS11-208ENST00000621676 CFAP73A6NFT4 308 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms