RNA–Protein interactions for RNA: ENST00000621474.4

CBWD3-217, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-217ENST00000621474 HSD17B2P37059 387 aa13.79□□□□□ -0.2
CBWD3-217ENST00000621474 SLC26A3P40879 764 aa13.79□□□□□ -0.2
CBWD3-217ENST00000621474 MLLT3P42568 568 aaPredicted RBP13.79□□□□□ -0.2
CBWD3-217ENST00000621474 SERPINB8P50452 374 aa13.79□□□□□ -0.2
CBWD3-217ENST00000621474 TBPL1P62380 186 aa13.79□□□□□ -0.2
CBWD3-217ENST00000621474 TGFBIQ15582 683 aa13.79□□□□□ -0.2
CBWD3-217ENST00000621474 FCRL6Q6DN72 434 aa13.79□□□□□ -0.2
CBWD3-217ENST00000621474 AGTRAPQ6RW13 159 aa13.79□□□□□ -0.2
CBWD3-217ENST00000621474 CDHR3Q6ZTQ4 885 aa13.79□□□□□ -0.2
CBWD3-217ENST00000621474 ADAMTSL2Q86TH1 951 aa13.79□□□□□ -0.2
CBWD3-217ENST00000621474 LSMEM2Q8N112 164 aa13.79□□□□□ -0.2
CBWD3-217ENST00000621474 PLD6Q8N2A8 252 aaKnown RBP13.79□□□□□ -0.2
CBWD3-217ENST00000621474 C19orf47Q8N9M1 422 aaKnown RBP13.79□□□□□ -0.2
CBWD3-217ENST00000621474 KIAA1191Q96A73 305 aa13.79□□□□□ -0.2
CBWD3-217ENST00000621474 ZNF501Q96CX3 271 aaPredicted RBP13.79□□□□□ -0.2
CBWD3-217ENST00000621474 OR6C1Q96RD1 312 aa13.79□□□□□ -0.2
CBWD3-217ENST00000621474 MIPEPQ99797 713 aa13.79□□□□□ -0.2
CBWD3-217ENST00000621474 ACAT2Q9BWD1 397 aa13.79□□□□□ -0.2
CBWD3-217ENST00000621474 ATG10Q9H0Y0 220 aa13.79□□□□□ -0.2
CBWD3-217ENST00000621474 ARL15Q9NXU5 204 aa13.79□□□□□ -0.2
CBWD3-217ENST00000621474 SH2B3Q9UQQ2 575 aa13.79□□□□□ -0.2
CBWD3-217ENST00000621474 ACOT9Q9Y305 439 aa13.79□□□□□ -0.2
CBWD3-217ENST00000621474 PCDHGA7Q9Y5G6 932 aa13.79□□□□□ -0.2
CBWD3-217ENST00000621474 PCDHGA3Q9Y5H0 932 aa13.79□□□□□ -0.2
CBWD3-217ENST00000621474 KLK4Q9Y5K2 254 aa13.79□□□□□ -0.2
CBWD3-217ENST00000621474 SEC16AO15027 2179 aa13.78□□□□□ -0.2
CBWD3-217ENST00000621474 H3BMH7 237 aa13.78□□□□□ -0.2
CBWD3-217ENST00000621474 NVLO15381 856 aaKnown RBP13.78□□□□□ -0.2
CBWD3-217ENST00000621474 RFPL1O75677 317 aa13.78□□□□□ -0.2
CBWD3-217ENST00000621474 TIAF1O95411 115 aa13.78□□□□□ -0.2
CBWD3-217ENST00000621474 LTA4HP09960 611 aaKnown RBP13.78□□□□□ -0.2
CBWD3-217ENST00000621474 NUDT17P0C025 328 aa13.78□□□□□ -0.2
CBWD3-217ENST00000621474 HIST1H2AGP0C0S8 130 aaPredicted RBP13.78□□□□□ -0.2
CBWD3-217ENST00000621474 MSL3P1P0C860 447 aa13.78□□□□□ -0.2
CBWD3-217ENST00000621474 HIST1H2ADP20671 130 aa13.78□□□□□ -0.2
CBWD3-217ENST00000621474 CNTFP26441 200 aa13.78□□□□□ -0.2
CBWD3-217ENST00000621474 GRIA3P42263 894 aa13.78□□□□□ -0.2
CBWD3-217ENST00000621474 ERVPABLB-1P60509 514 aa13.78□□□□□ -0.2
CBWD3-217ENST00000621474 ATP6V0D1P61421 351 aa13.78□□□□□ -0.2
CBWD3-217ENST00000621474 CDKL1Q00532 357 aa13.78□□□□□ -0.2
CBWD3-217ENST00000621474 SF1Q15637 639 aaKnown RBP13.78□□□□□ -0.2
CBWD3-217ENST00000621474 GPR19Q15760 415 aa13.78□□□□□ -0.2
CBWD3-217ENST00000621474 TBC1D1Q86TI0 1168 aaPredicted RBP13.78□□□□□ -0.2
CBWD3-217ENST00000621474 MREGQ8N565 214 aa13.78□□□□□ -0.2
CBWD3-217ENST00000621474 OR2W6PQ8NHA6 318 aa13.78□□□□□ -0.2
CBWD3-217ENST00000621474 FBXL8Q96CD0 374 aa13.78□□□□□ -0.2
CBWD3-217ENST00000621474 HIST1H2AHQ96KK5 128 aa13.78□□□□□ -0.2
CBWD3-217ENST00000621474 TAAR9Q96RI9 348 aa13.78□□□□□ -0.2
CBWD3-217ENST00000621474 ATOH8Q96SQ7 321 aa13.78□□□□□ -0.2
CBWD3-217ENST00000621474 HIST1H2AJQ99878 128 aa13.78□□□□□ -0.2
CBWD3-217ENST00000621474 H2AFJQ9BTM1 129 aa13.78□□□□□ -0.2
CBWD3-217ENST00000621474 DDA1Q9BW61 102 aa13.78□□□□□ -0.2
CBWD3-217ENST00000621474 SGPP1Q9BX95 441 aa13.78□□□□□ -0.2
CBWD3-217ENST00000621474 SPRY4Q9C004 299 aa13.78□□□□□ -0.2
CBWD3-217ENST00000621474 CHRNA10Q9GZZ6 450 aa13.78□□□□□ -0.2
CBWD3-217ENST00000621474 CCDC86Q9H6F5 360 aaKnown RBP13.78□□□□□ -0.2
CBWD3-217ENST00000621474 SLC6A20Q9NP91 592 aa13.78□□□□□ -0.2
CBWD3-217ENST00000621474 INTS7Q9NVH2 962 aaKnown RBP13.78□□□□□ -0.2
CBWD3-217ENST00000621474 ZNF358Q9NW07 568 aa13.78□□□□□ -0.2
CBWD3-217ENST00000621474 SLC39A1Q9NY26 324 aa13.78□□□□□ -0.2
CBWD3-217ENST00000621474 PSMC3IPQ9P2W1 217 aaPredicted RBP13.78□□□□□ -0.2
CBWD3-217ENST00000621474 TAC3Q9UHF0 121 aa13.78□□□□□ -0.2
CBWD3-217ENST00000621474 ACSL6Q9UKU0 697 aa13.78□□□□□ -0.2
CBWD3-217ENST00000621474 PCDHB11Q9Y5F2 797 aa13.78□□□□□ -0.2
CBWD3-217ENST00000621474 A0A087X1B8 175 aa13.77□□□□□ -0.21
CBWD3-217ENST00000621474 CTSBP07858 339 aa13.77□□□□□ -0.21
CBWD3-217ENST00000621474 SNRPAP09012 282 aaKnown RBP13.77□□□□□ -0.21
CBWD3-217ENST00000621474 TFEBP19484 476 aa13.77□□□□□ -0.21
CBWD3-217ENST00000621474 RBMS1P29558 406 aaKnown RBP13.77□□□□□ -0.21
CBWD3-217ENST00000621474 FOXM1Q08050 763 aa13.77□□□□□ -0.21
CBWD3-217ENST00000621474 TUBB3Q13509 450 aa13.77□□□□□ -0.21
CBWD3-217ENST00000621474 ICE2Q659A1 982 aa13.77□□□□□ -0.21
CBWD3-217ENST00000621474 TIFABQ6ZNK6 161 aa13.77□□□□□ -0.21
CBWD3-217ENST00000621474 CCDC91Q7Z6B0 441 aa13.77□□□□□ -0.21
CBWD3-217ENST00000621474 CYP4X1Q8N118 509 aa13.77□□□□□ -0.21
CBWD3-217ENST00000621474 OR56A3Q8NH54 315 aa13.77□□□□□ -0.21
CBWD3-217ENST00000621474 EPS8L3Q8TE67 593 aaKnown RBP13.77□□□□□ -0.21
CBWD3-217ENST00000621474 PYCR2Q96C36 320 aa13.77□□□□□ -0.21
CBWD3-217ENST00000621474 ZNF578Q96N58 590 aaPredicted RBP13.77□□□□□ -0.21
CBWD3-217ENST00000621474 CNTNAP3BQ96NU0 1288 aa13.77□□□□□ -0.21
CBWD3-217ENST00000621474 OR4K3Q96R72 315 aa13.77□□□□□ -0.21
CBWD3-217ENST00000621474 CNTNAP3Q9BZ76 1288 aa13.77□□□□□ -0.21
CBWD3-217ENST00000621474 B3GNT4Q9C0J1 378 aa13.77□□□□□ -0.21
CBWD3-217ENST00000621474 ALG9Q9H6U8 611 aa13.77□□□□□ -0.21
CBWD3-217ENST00000621474 SYNPO2LQ9H987 977 aa13.77□□□□□ -0.21
CBWD3-217ENST00000621474 THSD1Q9NS62 852 aa13.77□□□□□ -0.21
CBWD3-217ENST00000621474 FGF21Q9NSA1 209 aa13.77□□□□□ -0.21
CBWD3-217ENST00000621474 SOHLH2Q9NX45 425 aa13.77□□□□□ -0.21
CBWD3-217ENST00000621474 TBK1Q9UHD2 729 aa13.77□□□□□ -0.21
CBWD3-217ENST00000621474 ANKRD11Q6UB99 2663 aaPredicted RBP13.76□□□□□ -0.21
CBWD3-217ENST00000621474 ZNF839A8K0R7 811 aa13.76□□□□□ -0.21
CBWD3-217ENST00000621474 FOXO6A8MYZ6 492 aa13.76□□□□□ -0.21
CBWD3-217ENST00000621474 POLR1CO15160 346 aaPredicted RBP13.76□□□□□ -0.21
CBWD3-217ENST00000621474 CTSVO60911 334 aa13.76□□□□□ -0.21
CBWD3-217ENST00000621474 KRT37O76014 449 aa13.76□□□□□ -0.21
CBWD3-217ENST00000621474 KLHL2O95198 593 aa13.76□□□□□ -0.21
CBWD3-217ENST00000621474 FGF5P12034 268 aa13.76□□□□□ -0.21
CBWD3-217ENST00000621474 MTHFD2P13995 350 aa13.76□□□□□ -0.21
CBWD3-217ENST00000621474 SLCO1A2P46721 670 aa13.76□□□□□ -0.21
CBWD3-217ENST00000621474 RAB15P59190 212 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms