RNA–Protein interactions for RNA: ENST00000621181.4

CLK1-215, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best) BASIC

Gene CLK1, Length 1,843 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-215ENST00000621181 CST8O60676 142 aa7.54□□□□□ -1.2
CLK1-215ENST00000621181 SHBGP04278 402 aa7.54□□□□□ -1.2
CLK1-215ENST00000621181 ITGALP20701 1170 aa7.54□□□□□ -1.2
CLK1-215ENST00000621181 SOX8P57073 446 aa7.54□□□□□ -1.2
CLK1-215ENST00000621181 TFDP2Q14188 446 aa7.54□□□□□ -1.2
CLK1-215ENST00000621181 UBAP2Q5T6F2 1119 aaKnown RBP7.54□□□□□ -1.2
CLK1-215ENST00000621181 LRRC38Q5VT99 294 aa7.54□□□□□ -1.2
CLK1-215ENST00000621181 AGAP7PQ5VUJ5 663 aa7.54□□□□□ -1.2
CLK1-215ENST00000621181 PRAMEF13Q5VWM6 474 aa7.54□□□□□ -1.2
CLK1-215ENST00000621181 SP5Q6BEB4 398 aaPredicted RBP7.54□□□□□ -1.2
CLK1-215ENST00000621181 TLDC1Q6P9B6 456 aa7.54□□□□□ -1.2
CLK1-215ENST00000621181 FAM180AQ6UWF9 173 aa7.54□□□□□ -1.2
CLK1-215ENST00000621181 PPP1R32Q7Z5V6 425 aa7.54□□□□□ -1.2
CLK1-215ENST00000621181 TRIM73Q86UV7 250 aa7.54□□□□□ -1.2
CLK1-215ENST00000621181 FJX1Q86VR8 437 aa7.54□□□□□ -1.2
CLK1-215ENST00000621181 SLC13A5Q86YT5 568 aaPredicted RBP7.54□□□□□ -1.2
CLK1-215ENST00000621181 MCEMP1Q8IX19 187 aa7.54□□□□□ -1.2
CLK1-215ENST00000621181 ADGRF3Q8IZF5 1079 aa7.54□□□□□ -1.2
CLK1-215ENST00000621181 CNPY4Q8N129 248 aa7.54□□□□□ -1.2
CLK1-215ENST00000621181 ZNF567Q8N184 647 aa7.54□□□□□ -1.2
CLK1-215ENST00000621181 FBXO25Q8TCJ0 367 aa7.54□□□□□ -1.2
CLK1-215ENST00000621181 FAR1Q8WVX9 515 aa7.54□□□□□ -1.2
CLK1-215ENST00000621181 UBLCP1Q8WVY7 318 aaPredicted RBP7.54□□□□□ -1.2
CLK1-215ENST00000621181 TFGQ92734 400 aaPredicted RBP7.54□□□□□ -1.2
CLK1-215ENST00000621181 ULK4Q96C45 1275 aa7.54□□□□□ -1.2
CLK1-215ENST00000621181 PGM2Q96G03 612 aa7.54□□□□□ -1.2
CLK1-215ENST00000621181 AGAP4Q96P64 663 aa7.54□□□□□ -1.2
CLK1-215ENST00000621181 COPS8Q99627 209 aa7.54□□□□□ -1.2
CLK1-215ENST00000621181 NDC1Q9BTX1 674 aa7.54□□□□□ -1.2
CLK1-215ENST00000621181 SPRTNQ9H040 489 aaPredicted RBP7.54□□□□□ -1.2
CLK1-215ENST00000621181 OR52A5Q9H2C5 316 aa7.54□□□□□ -1.2
CLK1-215ENST00000621181 EPS8L2Q9H6S3 715 aa7.54□□□□□ -1.2
CLK1-215ENST00000621181 MVB12BQ9H7P6 319 aa7.54□□□□□ -1.2
CLK1-215ENST00000621181 COG4Q9H9E3 785 aa7.54□□□□□ -1.2
CLK1-215ENST00000621181 DDX56Q9NY93 547 aaKnown RBP7.54□□□□□ -1.2
CLK1-215ENST00000621181 FKBPLQ9UIM3 349 aa7.54□□□□□ -1.2
CLK1-215ENST00000621181 FBXL4Q9UKA2 621 aa7.54□□□□□ -1.2
CLK1-215ENST00000621181 SNX24Q9Y343 169 aa7.54□□□□□ -1.2
CLK1-215ENST00000621181 GOLGA6L10A0A0M3HER8 536 aa7.53□□□□□ -1.2
CLK1-215ENST00000621181 GOLGA6L10A6NI86 522 aa7.53□□□□□ -1.2
CLK1-215ENST00000621181 HCRTR1O43613 425 aa7.53□□□□□ -1.2
CLK1-215ENST00000621181 ALOX12BO75342 701 aa7.53□□□□□ -1.2
CLK1-215ENST00000621181 AGTP01019 485 aa7.53□□□□□ -1.2
CLK1-215ENST00000621181 UMODP07911 640 aa7.53□□□□□ -1.2
CLK1-215ENST00000621181 EDN3P14138 238 aa7.53□□□□□ -1.2
CLK1-215ENST00000621181 PECAM1P16284 738 aaPredicted RBP7.53□□□□□ -1.2
CLK1-215ENST00000621181 DRD4P21917 467 aa7.53□□□□□ -1.2
CLK1-215ENST00000621181 ALAS2P22557 587 aa7.53□□□□□ -1.2
CLK1-215ENST00000621181 PDHA2P29803 388 aa7.53□□□□□ -1.2
CLK1-215ENST00000621181 HPDP32754 393 aaPredicted RBP7.53□□□□□ -1.2
CLK1-215ENST00000621181 COILP38432 576 aaPredicted RBP7.53□□□□□ -1.2
CLK1-215ENST00000621181 CD151P48509 253 aa7.53□□□□□ -1.2
CLK1-215ENST00000621181 MAGOHP61326 146 aaKnown RBP7.53□□□□□ -1.2
CLK1-215ENST00000621181 TMPRSS15P98073 1019 aa7.53□□□□□ -1.2
CLK1-215ENST00000621181 ZNF169Q14929 603 aaPredicted RBP7.53□□□□□ -1.2
CLK1-215ENST00000621181 TLR1Q15399 786 aa7.53□□□□□ -1.2
CLK1-215ENST00000621181 MFSD7Q6UXD7 560 aa7.53□□□□□ -1.2
CLK1-215ENST00000621181 NXPE1Q8N323 547 aa7.53□□□□□ -1.2
CLK1-215ENST00000621181 UBL4BQ8N7F7 174 aa7.53□□□□□ -1.2
CLK1-215ENST00000621181 HEXDCQ8WVB3 486 aa7.53□□□□□ -1.2
CLK1-215ENST00000621181 MAGOHBQ96A72 148 aaKnown RBP7.53□□□□□ -1.2
CLK1-215ENST00000621181 NACC2Q96BF6 587 aa7.53□□□□□ -1.2
CLK1-215ENST00000621181 HAUS1Q96CS2 278 aa7.53□□□□□ -1.2
CLK1-215ENST00000621181 ZNF317Q96PQ6 595 aaPredicted RBP7.53□□□□□ -1.2
CLK1-215ENST00000621181 FICDQ9BVA6 458 aa7.53□□□□□ -1.2
CLK1-215ENST00000621181 SLC24A3Q9HC58 644 aa7.53□□□□□ -1.2
CLK1-215ENST00000621181 COPG2Q9UBF2 871 aa7.53□□□□□ -1.2
CLK1-215ENST00000621181 DCHS2Q6V1P9 2916 aa7.53□□□□□ -1.2
CLK1-215ENST00000621181 SNRNP200O75643 2136 aaKnown RBP7.52□□□□□ -1.2
CLK1-215ENST00000621181 A0A1B0GUH1 482 aa7.52□□□□□ -1.2
CLK1-215ENST00000621181 HEATR9A2RTY3 570 aa7.52□□□□□ -1.2
CLK1-215ENST00000621181 H3BMH7 237 aa7.52□□□□□ -1.2
CLK1-215ENST00000621181 E2F3O00716 465 aa7.52□□□□□ -1.2
CLK1-215ENST00000621181 SPOPO43791 374 aa7.52□□□□□ -1.2
CLK1-215ENST00000621181 CNOT3O75175 753 aaKnown RBP7.52□□□□□ -1.2
CLK1-215ENST00000621181 ANXA9O76027 345 aa7.52□□□□□ -1.2
CLK1-215ENST00000621181 CRTAMO95727 393 aa7.52□□□□□ -1.2
CLK1-215ENST00000621181 UGT2B7P16662 529 aa7.52□□□□□ -1.2
CLK1-215ENST00000621181 MMP11P24347 488 aa7.52□□□□□ -1.2
CLK1-215ENST00000621181 IVDP26440 423 aa7.52□□□□□ -1.2
CLK1-215ENST00000621181 SHMT2P34897 504 aa7.52□□□□□ -1.2
CLK1-215ENST00000621181 CDKN2BP42772 138 aa7.52□□□□□ -1.2
CLK1-215ENST00000621181 TSFMP43897 325 aaKnown RBP7.52□□□□□ -1.2
CLK1-215ENST00000621181 GEMP55040 296 aa7.52□□□□□ -1.2
CLK1-215ENST00000621181 RPA4Q13156 261 aa7.52□□□□□ -1.2
CLK1-215ENST00000621181 ZIC1Q15915 447 aa7.52□□□□□ -1.2
CLK1-215ENST00000621181 ZXDCQ2QGD7 858 aaPredicted RBP7.52□□□□□ -1.2
CLK1-215ENST00000621181 KRT71Q3SY84 523 aa7.52□□□□□ -1.2
CLK1-215ENST00000621181 B3GNTL1Q67FW5 361 aaPredicted RBP7.52□□□□□ -1.2
CLK1-215ENST00000621181 MRPL14Q6P1L8 145 aaKnown RBP7.52□□□□□ -1.2
CLK1-215ENST00000621181 SNX20Q7Z614 316 aa7.52□□□□□ -1.2
CLK1-215ENST00000621181 OR13C4Q8NGS5 318 aa7.52□□□□□ -1.2
CLK1-215ENST00000621181 OR2A14Q96R47 310 aa7.52□□□□□ -1.2
CLK1-215ENST00000621181 APOL2Q9BQE5 337 aa7.52□□□□□ -1.2
CLK1-215ENST00000621181 FAM129AQ9BZQ8 928 aa7.52□□□□□ -1.2
CLK1-215ENST00000621181 TRIM31Q9BZY9 425 aa7.52□□□□□ -1.2
CLK1-215ENST00000621181 FAM96AQ9H5X1 160 aa7.52□□□□□ -1.2
CLK1-215ENST00000621181 SLC6A20Q9NP91 592 aa7.52□□□□□ -1.2
CLK1-215ENST00000621181 IGSF5Q9NSI5 407 aa7.52□□□□□ -1.2
CLK1-215ENST00000621181 OLAHQ9NV23 265 aa7.52□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms