RNA–Protein interactions for RNA: ENST00000620854.4

NEDD9-216, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5 BASIC

Gene NEDD9, Length 4,086 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-216ENST00000620854 CACNG3O60359 315 aa6.79□□□□□ -1.32
NEDD9-216ENST00000620854 KERAO60938 352 aa6.79□□□□□ -1.32
NEDD9-216ENST00000620854 CREG1O75629 220 aa6.79□□□□□ -1.32
NEDD9-216ENST00000620854 ADH1AP07327 375 aa6.79□□□□□ -1.32
NEDD9-216ENST00000620854 CKBP12277 381 aa6.79□□□□□ -1.32
NEDD9-216ENST00000620854 ZNF7P17097 686 aaPredicted RBP6.79□□□□□ -1.32
NEDD9-216ENST00000620854 MSH3P20585 1137 aa6.79□□□□□ -1.32
NEDD9-216ENST00000620854 DNAJB1P25685 340 aa6.79□□□□□ -1.32
NEDD9-216ENST00000620854 GPR15P49685 360 aa6.79□□□□□ -1.32
NEDD9-216ENST00000620854 IFITM2Q01629 132 aa6.79□□□□□ -1.32
NEDD9-216ENST00000620854 PPIGQ13427 754 aaKnown RBP eCLIP6.79□□□□□ -1.322e-8■■□□□ 11.7
NEDD9-216ENST00000620854 ARMCX4Q5H9R4 360 aa6.79□□□□□ -1.32
NEDD9-216ENST00000620854 CEP78Q5JTW2 689 aa6.79□□□□□ -1.32
NEDD9-216ENST00000620854 PIK3R6Q5UE93 754 aa6.79□□□□□ -1.32
NEDD9-216ENST00000620854 FUT10Q6P4F1 479 aa6.79□□□□□ -1.32
NEDD9-216ENST00000620854 CCDC149Q6ZUS6 474 aa6.79□□□□□ -1.32
NEDD9-216ENST00000620854 ZDHHC21Q8IVQ6 265 aa6.79□□□□□ -1.32
NEDD9-216ENST00000620854 SLC13A3Q8WWT9 602 aa6.79□□□□□ -1.32
NEDD9-216ENST00000620854 AARSD1Q9BTE6 412 aaKnown RBP6.79□□□□□ -1.32
NEDD9-216ENST00000620854 NUAK2Q9H093 628 aa6.79□□□□□ -1.32
NEDD9-216ENST00000620854 ACTL8Q9H568 366 aa6.79□□□□□ -1.32
NEDD9-216ENST00000620854 NSUN3Q9H649 340 aaKnown RBP6.79□□□□□ -1.32
NEDD9-216ENST00000620854 C11orf49Q9H6J7 331 aa6.79□□□□□ -1.32
NEDD9-216ENST00000620854 IPPKQ9H8X2 491 aa6.79□□□□□ -1.32
NEDD9-216ENST00000620854 FLRT1Q9NZU1 646 aa6.79□□□□□ -1.32
NEDD9-216ENST00000620854 ZNF639Q9UID6 485 aa6.79□□□□□ -1.32
NEDD9-216ENST00000620854 PCTPQ9UKL6 214 aa6.79□□□□□ -1.32
NEDD9-216ENST00000620854 TPRKBQ9Y3C4 175 aa6.79□□□□□ -1.32
NEDD9-216ENST00000620854 PIPSLA2A3N6 862 aa6.79□□□□□ -1.32
NEDD9-216ENST00000620854 TTC34A8MYJ7 566 aa6.79□□□□□ -1.32
NEDD9-216ENST00000620854 HHLA1C9JL84 531 aa6.79□□□□□ -1.32
NEDD9-216ENST00000620854 GABRDO14764 452 aa6.79□□□□□ -1.32
NEDD9-216ENST00000620854 RGS10O43665 173 aa6.79□□□□□ -1.32
NEDD9-216ENST00000620854 IDH3BO43837 385 aa6.79□□□□□ -1.32
NEDD9-216ENST00000620854 MMP2P08253 660 aa6.79□□□□□ -1.32
NEDD9-216ENST00000620854 CHRM5P08912 532 aaPredicted RBP6.79□□□□□ -1.32
NEDD9-216ENST00000620854 CD6P30203 668 aa6.79□□□□□ -1.32
NEDD9-216ENST00000620854 PPP5CP53041 499 aa6.79□□□□□ -1.32
NEDD9-216ENST00000620854 FOXM1Q08050 763 aa6.79□□□□□ -1.32
NEDD9-216ENST00000620854 ANGPT1Q15389 498 aa6.79□□□□□ -1.32
NEDD9-216ENST00000620854 BCL2A1Q16548 175 aa6.79□□□□□ -1.32
NEDD9-216ENST00000620854 LRIT3Q3SXY7 679 aa6.79□□□□□ -1.32
NEDD9-216ENST00000620854 CARD16Q5EG05 197 aa6.79□□□□□ -1.32
NEDD9-216ENST00000620854 VARS2Q5ST30 1063 aaKnown RBP6.79□□□□□ -1.32
NEDD9-216ENST00000620854 HIST2H2AA3Q6FI13 130 aa6.79□□□□□ -1.32
NEDD9-216ENST00000620854 PSAPL1Q6NUJ1 521 aa6.79□□□□□ -1.32
NEDD9-216ENST00000620854 LYSMD2Q8IV50 215 aa6.79□□□□□ -1.32
NEDD9-216ENST00000620854 LIX1Q8N485 282 aa6.79□□□□□ -1.32
NEDD9-216ENST00000620854 ATAD1Q8NBU5 361 aa6.79□□□□□ -1.32
NEDD9-216ENST00000620854 OR6K2Q8NGY2 324 aa6.79□□□□□ -1.32
NEDD9-216ENST00000620854 OR52J3Q8NH60 311 aa6.79□□□□□ -1.32
NEDD9-216ENST00000620854 PAWRQ96IZ0 340 aaKnown RBP6.79□□□□□ -1.32
NEDD9-216ENST00000620854 CTRCQ99895 268 aa6.79□□□□□ -1.32
NEDD9-216ENST00000620854 ACBD6Q9BR61 282 aa6.79□□□□□ -1.32
NEDD9-216ENST00000620854 MIEF1Q9NQG6 463 aa6.79□□□□□ -1.32
NEDD9-216ENST00000620854 UBA2Q9UBT2 640 aaPredicted RBP6.79□□□□□ -1.32
NEDD9-216ENST00000620854 ABCG2Q9UNQ0 655 aa6.79□□□□□ -1.32
NEDD9-216ENST00000620854 A0A0D9SEW6 157 aa6.79□□□□□ -1.32
NEDD9-216ENST00000620854 CCDC85CA6NKD9 419 aa6.79□□□□□ -1.32
NEDD9-216ENST00000620854 CLTBP09497 229 aa6.79□□□□□ -1.32
NEDD9-216ENST00000620854 POU2F1P14859 743 aa6.79□□□□□ -1.32
NEDD9-216ENST00000620854 ITIH1P19827 911 aa6.79□□□□□ -1.32
NEDD9-216ENST00000620854 RRM2P31350 389 aa6.79□□□□□ -1.32
NEDD9-216ENST00000620854 LIPAP38571 399 aa6.79□□□□□ -1.32
NEDD9-216ENST00000620854 ZNF135P52742 658 aaPredicted RBP6.79□□□□□ -1.32
NEDD9-216ENST00000620854 STC1P52823 247 aa6.79□□□□□ -1.32
NEDD9-216ENST00000620854 PHC1P78364 1004 aa6.79□□□□□ -1.32
NEDD9-216ENST00000620854 CREMQ03060 361 aa6.79□□□□□ -1.32
NEDD9-216ENST00000620854 ACSM2AQ08AH3 577 aa6.79□□□□□ -1.32
NEDD9-216ENST00000620854 SMARCB1Q12824 385 aa6.79□□□□□ -1.32
NEDD9-216ENST00000620854 DUSP4Q13115 394 aa6.79□□□□□ -1.32
NEDD9-216ENST00000620854 PRSS36Q5K4E3 855 aa6.79□□□□□ -1.32
NEDD9-216ENST00000620854 UBXN11Q5T124 520 aa6.79□□□□□ -1.32
NEDD9-216ENST00000620854 ACSM2BQ68CK6 577 aa6.79□□□□□ -1.32
NEDD9-216ENST00000620854 NEK10Q6ZWH5 1172 aa6.79□□□□□ -1.32
NEDD9-216ENST00000620854 CLDN19Q8N6F1 224 aa6.79□□□□□ -1.32
NEDD9-216ENST00000620854 TTC29Q8NA56 475 aaPredicted RBP6.79□□□□□ -1.32
NEDD9-216ENST00000620854 PIK3C3Q8NEB9 887 aa6.79□□□□□ -1.32
NEDD9-216ENST00000620854 DYNC2LI1Q8TCX1 351 aa6.79□□□□□ -1.32
NEDD9-216ENST00000620854 IGSF8Q969P0 613 aa6.79□□□□□ -1.32
NEDD9-216ENST00000620854 ZNF486Q96H40 463 aaPredicted RBP6.79□□□□□ -1.32
NEDD9-216ENST00000620854 CNDP2Q96KP4 475 aaKnown RBP6.79□□□□□ -1.32
NEDD9-216ENST00000620854 ZIC5Q96T25 663 aa6.79□□□□□ -1.32
NEDD9-216ENST00000620854 APOL4Q9BPW4 351 aa6.79□□□□□ -1.32
NEDD9-216ENST00000620854 TTYH2Q9BSA4 534 aa6.79□□□□□ -1.32
NEDD9-216ENST00000620854 TFB2MQ9H5Q4 396 aaKnown RBP6.79□□□□□ -1.32
NEDD9-216ENST00000620854 C8orf4Q9NR00 106 aa6.79□□□□□ -1.32
NEDD9-216ENST00000620854 OSER1Q9NX31 292 aa6.79□□□□□ -1.32
NEDD9-216ENST00000620854 QPCTLQ9NXS2 382 aa6.79□□□□□ -1.32
NEDD9-216ENST00000620854 SNX6Q9UNH7 406 aa6.79□□□□□ -1.32
NEDD9-216ENST00000620854 SPO11Q9Y5K1 396 aa6.79□□□□□ -1.32
NEDD9-216ENST00000620854 VPS4BO75351 444 aa6.78□□□□□ -1.32
NEDD9-216ENST00000620854 WBP4O75554 376 aaKnown RBP6.78□□□□□ -1.32
NEDD9-216ENST00000620854 GABARAPO95166 117 aa6.78□□□□□ -1.32
NEDD9-216ENST00000620854 ITGB1P05556 798 aa6.78□□□□□ -1.32
NEDD9-216ENST00000620854 PGRP06401 933 aa6.78□□□□□ -1.32
NEDD9-216ENST00000620854 COL6A1P12109 1028 aa6.78□□□□□ -1.32
NEDD9-216ENST00000620854 GADD45AP24522 165 aa6.78□□□□□ -1.32
NEDD9-216ENST00000620854 BMPR1AP36894 532 aa6.78□□□□□ -1.32
NEDD9-216ENST00000620854 MLLT6P55198 1093 aaPredicted RBP6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms