RNA–Protein interactions for RNA: ENST00000619644.4

SMTN-223, Transcript of smoothelin, human

TSL 2 BASIC

Gene SMTN, Length 3,227 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMTN-223	ENST00000619644	NEK6	Q9HC98	313 aa		14.11	□□□□□ -0.15
SMTN-223	ENST00000619644	IL17C	Q9P0M4	197 aa		14.11	□□□□□ -0.15
SMTN-223	ENST00000619644	DLGAP4	Q9Y2H0	992 aa		14.11	□□□□□ -0.15
SMTN-223	ENST00000619644	PCDHB7	Q9Y5E2	793 aa		14.11	□□□□□ -0.15
SMTN-223	ENST00000619644	C2orf78	A6NCI8	922 aa		14.1	□□□□□ -0.15
SMTN-223	ENST00000619644	PER2	O15055	1255 aa		14.1	□□□□□ -0.15
SMTN-223	ENST00000619644	GUCY1B2	O75343	617 aa		14.1	□□□□□ -0.15
SMTN-223	ENST00000619644	C1QC	P02747	245 aa		14.1	□□□□□ -0.15
SMTN-223	ENST00000619644	BCKDHA	P12694	445 aa		14.1	□□□□□ -0.15
SMTN-223	ENST00000619644	PRKAR2A	P13861	404 aa	Known RBP	14.1	□□□□□ -0.15
SMTN-223	ENST00000619644	ITGAL	P20701	1170 aa		14.1	□□□□□ -0.15
SMTN-223	ENST00000619644	DGKA	P23743	735 aa		14.1	□□□□□ -0.15
SMTN-223	ENST00000619644	SLC11A1	P49279	550 aa		14.1	□□□□□ -0.15
SMTN-223	ENST00000619644	COPZ1	P61923	177 aa		14.1	□□□□□ -0.15
SMTN-223	ENST00000619644	FAM189B	P81408	668 aa		14.1	□□□□□ -0.15
SMTN-223	ENST00000619644	PCBP2	Q15366	365 aa	Known RBP eCLIP	14.1	□□□□□ -0.15	2e-7	■■■■□ 24.4
SMTN-223	ENST00000619644	YIPF6	Q96EC8	236 aa		14.1	□□□□□ -0.15
SMTN-223	ENST00000619644	TPD52L3	Q96J77	140 aa		14.1	□□□□□ -0.15
SMTN-223	ENST00000619644	APOLD1	Q96LR9	279 aa		14.1	□□□□□ -0.15
SMTN-223	ENST00000619644	CEP44	Q9C0F1	390 aa		14.1	□□□□□ -0.15
SMTN-223	ENST00000619644	TBX1	O43435	398 aa		14.1	□□□□□ -0.15
SMTN-223	ENST00000619644	STC2	O76061	302 aa		14.1	□□□□□ -0.15
SMTN-223	ENST00000619644	EOMES	O95936	686 aa		14.1	□□□□□ -0.15
SMTN-223	ENST00000619644	AQP1	P29972	269 aa		14.1	□□□□□ -0.15
SMTN-223	ENST00000619644	CA8	P35219	290 aa		14.1	□□□□□ -0.15
SMTN-223	ENST00000619644	GRK3	P35626	688 aa		14.1	□□□□□ -0.15
SMTN-223	ENST00000619644	CLCN4	P51793	760 aa		14.1	□□□□□ -0.15
SMTN-223	ENST00000619644	ARHGDIA	P52565	204 aa		14.1	□□□□□ -0.15
SMTN-223	ENST00000619644	ARPC4	P59998	168 aa		14.1	□□□□□ -0.15
SMTN-223	ENST00000619644	PRKCZ	Q05513	592 aa		14.1	□□□□□ -0.15
SMTN-223	ENST00000619644	MBTPS1	Q14703	1052 aa		14.1	□□□□□ -0.15
SMTN-223	ENST00000619644	ACOX1	Q15067	660 aa		14.1	□□□□□ -0.15
SMTN-223	ENST00000619644	SMN1	Q16637	294 aa	Known RBP	14.1	□□□□□ -0.15
SMTN-223	ENST00000619644	ZNF691	Q5VV52	312 aa		14.1	□□□□□ -0.15
SMTN-223	ENST00000619644	ANGPTL8	Q6UXH0	198 aa		14.1	□□□□□ -0.15
SMTN-223	ENST00000619644	ZNF621	Q6ZSS3	439 aa		14.1	□□□□□ -0.15
SMTN-223	ENST00000619644	NEK10	Q6ZWH5	1172 aa		14.1	□□□□□ -0.15
SMTN-223	ENST00000619644	LACC1	Q8IV20	430 aa		14.1	□□□□□ -0.15
SMTN-223	ENST00000619644	MSRB3	Q8IXL7	192 aa		14.1	□□□□□ -0.15
SMTN-223	ENST00000619644	ATG16L2	Q8NAA4	619 aa		14.1	□□□□□ -0.15
SMTN-223	ENST00000619644	ZNF540	Q8NDQ6	660 aa		14.1	□□□□□ -0.15
SMTN-223	ENST00000619644	ASIC4	Q96FT7	647 aa		14.1	□□□□□ -0.15
SMTN-223	ENST00000619644	MYO19	Q96H55	970 aa		14.1	□□□□□ -0.15
SMTN-223	ENST00000619644	CD244	Q9BZW8	370 aa		14.1	□□□□□ -0.15
SMTN-223	ENST00000619644	XRN2	Q9H0D6	950 aa	Known RBP eCLIP	14.1	□□□□□ -0.15
SMTN-223	ENST00000619644	RNF38	Q9H0F5	515 aa		14.1	□□□□□ -0.15
SMTN-223	ENST00000619644	PRDM8	Q9NQV8	689 aa		14.1	□□□□□ -0.15
SMTN-223	ENST00000619644		H3BNC9	293 aa		14.09	□□□□□ -0.15
SMTN-223	ENST00000619644	SLC28A1	O00337	649 aa		14.09	□□□□□ -0.15
SMTN-223	ENST00000619644	DYRK3	O43781	588 aa		14.09	□□□□□ -0.15
SMTN-223	ENST00000619644	MYC	P01106	439 aa	Predicted RBP	14.09	□□□□□ -0.15
SMTN-223	ENST00000619644	SPN	P16150	400 aa		14.09	□□□□□ -0.15
SMTN-223	ENST00000619644	TACR1	P25103	407 aa		14.09	□□□□□ -0.15
SMTN-223	ENST00000619644	PHC1	P78364	1004 aa		14.09	□□□□□ -0.15
SMTN-223	ENST00000619644	MAD2L1	Q13257	205 aa	Predicted RBP	14.09	□□□□□ -0.15
SMTN-223	ENST00000619644	CST9	Q5W186	159 aa		14.09	□□□□□ -0.15
SMTN-223	ENST00000619644	ANKS3	Q6ZW76	656 aa		14.09	□□□□□ -0.15
SMTN-223	ENST00000619644	GALNT13	Q8IUC8	556 aa		14.09	□□□□□ -0.15
SMTN-223	ENST00000619644	TMEM132C	Q8N3T6	1108 aa		14.09	□□□□□ -0.15
SMTN-223	ENST00000619644	AADAT	Q8N5Z0	425 aa		14.09	□□□□□ -0.15
SMTN-223	ENST00000619644	ZBTB2	Q8N680	514 aa		14.09	□□□□□ -0.15
SMTN-223	ENST00000619644	OR5K1	Q8NHB7	308 aa		14.09	□□□□□ -0.15
SMTN-223	ENST00000619644	C1orf109	Q9NX04	203 aa		14.09	□□□□□ -0.15
SMTN-223	ENST00000619644	SCN10A	Q9Y5Y9	1956 aa		14.09	□□□□□ -0.15
SMTN-223	ENST00000619644	MANBA	O00462	879 aa		14.09	□□□□□ -0.15
SMTN-223	ENST00000619644	RFXANK	O14593	260 aa		14.09	□□□□□ -0.15
SMTN-223	ENST00000619644	STK16	O75716	305 aa		14.09	□□□□□ -0.15
SMTN-223	ENST00000619644	VNN2	O95498	520 aa		14.09	□□□□□ -0.15
SMTN-223	ENST00000619644	IL6	P05231	212 aa		14.09	□□□□□ -0.15
SMTN-223	ENST00000619644	CCDC159	P0C7I6	412 aa		14.09	□□□□□ -0.15
SMTN-223	ENST00000619644	MAG	P20916	626 aa		14.09	□□□□□ -0.15
SMTN-223	ENST00000619644	ITPKA	P23677	461 aa		14.09	□□□□□ -0.15
SMTN-223	ENST00000619644	CASP3	P42574	277 aa		14.09	□□□□□ -0.15
SMTN-223	ENST00000619644	CDKN2C	P42773	168 aa		14.09	□□□□□ -0.15
SMTN-223	ENST00000619644	RPS14	P62263	151 aa	Known RBP	14.09	□□□□□ -0.15
SMTN-223	ENST00000619644	FKBP1B	P68106	108 aa		14.09	□□□□□ -0.15
SMTN-223	ENST00000619644	BOP1	Q14137	746 aa	Known RBP	14.09	□□□□□ -0.15
SMTN-223	ENST00000619644	CHRNA6	Q15825	494 aa		14.09	□□□□□ -0.15
SMTN-223	ENST00000619644	STEAP3	Q658P3	488 aa		14.09	□□□□□ -0.15
SMTN-223	ENST00000619644	OR4F3	Q6IEY1	312 aa		14.09	□□□□□ -0.15
SMTN-223	ENST00000619644	HORMAD1	Q86X24	394 aa		14.09	□□□□□ -0.15
SMTN-223	ENST00000619644	DCP2	Q8IU60	420 aa	Known RBP	14.09	□□□□□ -0.15
SMTN-223	ENST00000619644	RBFA	Q8N0V3	343 aa		14.09	□□□□□ -0.15
SMTN-223	ENST00000619644	RPL3L	Q92901	407 aa	Known RBP	14.09	□□□□□ -0.15
SMTN-223	ENST00000619644	MIR1-1HG	Q9H1L0	117 aa		14.09	□□□□□ -0.15
SMTN-223	ENST00000619644	GORASP2	Q9H8Y8	452 aa		14.09	□□□□□ -0.15
SMTN-223	ENST00000619644	GPRC5B	Q9NZH0	403 aa		14.09	□□□□□ -0.15
SMTN-223	ENST00000619644	TMA7	Q9Y2S6	64 aa	Known RBP	14.09	□□□□□ -0.15
SMTN-223	ENST00000619644	PCDHGB1	Q9Y5G3	927 aa		14.09	□□□□□ -0.15
SMTN-223	ENST00000619644	GMPPB	Q9Y5P6	360 aa		14.09	□□□□□ -0.15
SMTN-223	ENST00000619644	ISPD	A4D126	451 aa		14.09	□□□□□ -0.15
SMTN-223	ENST00000619644	ADAMTS4	O75173	837 aa		14.09	□□□□□ -0.15
SMTN-223	ENST00000619644	SCEL	O95171	688 aa		14.09	□□□□□ -0.15
SMTN-223	ENST00000619644	PDYN	P01213	254 aa		14.09	□□□□□ -0.15
SMTN-223	ENST00000619644	CASP9	P55211	416 aa		14.09	□□□□□ -0.15
SMTN-223	ENST00000619644	CDK5R2	Q13319	367 aa		14.09	□□□□□ -0.15
SMTN-223	ENST00000619644	DDX59	Q5T1V6	619 aa	Known RBP eCLIP	14.09	□□□□□ -0.15
SMTN-223	ENST00000619644	ADGRF1	Q5T601	910 aa		14.09	□□□□□ -0.15
SMTN-223	ENST00000619644	ELMOD1	Q8N336	334 aa		14.09	□□□□□ -0.15
SMTN-223	ENST00000619644	SVOPL	Q8N434	492 aa		14.09	□□□□□ -0.15

Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms