RNA–Protein interactions for RNA: ENST00000619079.1

UPF3A-212, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2

Gene UPF3A, Length 2,423 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-212ENST00000619079 ROGDIQ9GZN7 287 aa10.55□□□□□ -0.72
UPF3A-212ENST00000619079 TKTL2Q9H0I9 626 aa10.55□□□□□ -0.72
UPF3A-212ENST00000619079 RASSF1Q9NS23 344 aa10.55□□□□□ -0.72
UPF3A-212ENST00000619079 OLA1Q9NTK5 396 aaKnown RBP10.55□□□□□ -0.72
UPF3A-212ENST00000619079 RBM22Q9NW64 420 aaKnown RBP eCLIP10.55□□□□□ -0.72
UPF3A-212ENST00000619079 ERVK13-1Q9NX77 482 aa10.55□□□□□ -0.72
UPF3A-212ENST00000619079 EVLQ9UI08 416 aaPredicted RBP10.55□□□□□ -0.72
UPF3A-212ENST00000619079 PSORS1C1Q9UIG5 152 aa10.55□□□□□ -0.72
UPF3A-212ENST00000619079 SNX7Q9UNH6 387 aa10.55□□□□□ -0.72
UPF3A-212ENST00000619079 KLHL20Q9Y2M5 609 aa10.55□□□□□ -0.72
UPF3A-212ENST00000619079 CRYL1Q9Y2S2 319 aa10.55□□□□□ -0.72
UPF3A-212ENST00000619079 SNTNA6NMZ2 147 aa10.55□□□□□ -0.72
UPF3A-212ENST00000619079 M0QZ92 97 aa10.55□□□□□ -0.72
UPF3A-212ENST00000619079 CITO14578 2027 aa10.55□□□□□ -0.72
UPF3A-212ENST00000619079 CTDSP2O14595 271 aa10.55□□□□□ -0.72
UPF3A-212ENST00000619079 HCRTO43612 131 aa10.55□□□□□ -0.72
UPF3A-212ENST00000619079 MAFKO60675 156 aa10.55□□□□□ -0.72
UPF3A-212ENST00000619079 CPNE3O75131 537 aaKnown RBP10.55□□□□□ -0.72
UPF3A-212ENST00000619079 TSPAN9O75954 239 aa10.55□□□□□ -0.72
UPF3A-212ENST00000619079 HLA-DQB2P05538 268 aa10.55□□□□□ -0.72
UPF3A-212ENST00000619079 G6PDP11413 515 aa10.55□□□□□ -0.72
UPF3A-212ENST00000619079 MYCLP1P12525 358 aaPredicted RBP10.55□□□□□ -0.72
UPF3A-212ENST00000619079 HTR7P34969 479 aa10.55□□□□□ -0.72
UPF3A-212ENST00000619079 SCN1AP35498 2009 aa10.55□□□□□ -0.72
UPF3A-212ENST00000619079 PNPLA4P41247 253 aa10.55□□□□□ -0.72
UPF3A-212ENST00000619079 GNPDA1P46926 289 aa10.55□□□□□ -0.72
UPF3A-212ENST00000619079 CXCR3P49682 368 aa10.55□□□□□ -0.72
UPF3A-212ENST00000619079 RGS6P49758 472 aa10.55□□□□□ -0.72
UPF3A-212ENST00000619079 LIMK1P53667 647 aa10.55□□□□□ -0.72
UPF3A-212ENST00000619079 SLAMF1Q13291 335 aa10.55□□□□□ -0.72
UPF3A-212ENST00000619079 TNK1Q13470 666 aa10.55□□□□□ -0.72
UPF3A-212ENST00000619079 PRSS36Q5K4E3 855 aa10.55□□□□□ -0.72
UPF3A-212ENST00000619079 C9orf57Q5W0N0 161 aa10.55□□□□□ -0.72
UPF3A-212ENST00000619079 DPY19L3Q6ZPD9 716 aa10.55□□□□□ -0.72
UPF3A-212ENST00000619079 HFE2Q6ZVN8 426 aa10.55□□□□□ -0.72
UPF3A-212ENST00000619079 SERINC5Q86VE9 423 aa10.55□□□□□ -0.72
UPF3A-212ENST00000619079 OR10T2Q8NGX3 314 aa10.55□□□□□ -0.72
UPF3A-212ENST00000619079 OMA1Q96E52 524 aa10.55□□□□□ -0.72
UPF3A-212ENST00000619079 Q96MT0 163 aa10.55□□□□□ -0.72
UPF3A-212ENST00000619079 COL21A1Q96P44 957 aa10.55□□□□□ -0.72
UPF3A-212ENST00000619079 TRNT1Q96Q11 434 aaKnown RBP10.55□□□□□ -0.72
UPF3A-212ENST00000619079 ZNF382Q96SR6 550 aa10.55□□□□□ -0.72
UPF3A-212ENST00000619079 RAD9AQ99638 391 aa10.55□□□□□ -0.72
UPF3A-212ENST00000619079 ATXN3LQ9H3M9 355 aa10.55□□□□□ -0.72
UPF3A-212ENST00000619079 ZNF556Q9HAH1 456 aa10.55□□□□□ -0.72
UPF3A-212ENST00000619079 AASSQ9UDR5 926 aa10.55□□□□□ -0.72
UPF3A-212ENST00000619079 PCTPQ9UKL6 214 aa10.55□□□□□ -0.72
UPF3A-212ENST00000619079 RABL2BQ9UNT1 228 aa10.55□□□□□ -0.72
UPF3A-212ENST00000619079 ARIH1Q9Y4X5 557 aaPredicted RBP10.55□□□□□ -0.72
UPF3A-212ENST00000619079 PCDHB5Q9Y5E4 795 aa10.55□□□□□ -0.72
UPF3A-212ENST00000619079 MYLKQ15746 1914 aa10.54□□□□□ -0.72
UPF3A-212ENST00000619079 A0A0X1KG70 313 aa10.54□□□□□ -0.72
UPF3A-212ENST00000619079 LCHNA4D1U4 455 aa10.54□□□□□ -0.72
UPF3A-212ENST00000619079 MBLAC1A4D2B0 266 aaPredicted RBP10.54□□□□□ -0.72
UPF3A-212ENST00000619079 OR5K3A6NET4 321 aa10.54□□□□□ -0.72
UPF3A-212ENST00000619079 MROH6A6NGR9 719 aa10.54□□□□□ -0.72
UPF3A-212ENST00000619079 hCG_2039718K7EN88 272 aa10.54□□□□□ -0.72
UPF3A-212ENST00000619079 FGF10O15520 208 aaPredicted RBP10.54□□□□□ -0.72
UPF3A-212ENST00000619079 MTRF1O75570 445 aaKnown RBP10.54□□□□□ -0.72
UPF3A-212ENST00000619079 GLP2RO95838 553 aa10.54□□□□□ -0.72
UPF3A-212ENST00000619079 VTNP04004 478 aa10.54□□□□□ -0.72
UPF3A-212ENST00000619079 ALPPP05187 535 aa10.54□□□□□ -0.72
UPF3A-212ENST00000619079 CDK1P06493 297 aa10.54□□□□□ -0.72
UPF3A-212ENST00000619079 HLA-DMAP28067 261 aa10.54□□□□□ -0.72
UPF3A-212ENST00000619079 HOXC8P31273 242 aa10.54□□□□□ -0.72
UPF3A-212ENST00000619079 NDUFV1P49821 464 aa10.54□□□□□ -0.72
UPF3A-212ENST00000619079 DGKQP52824 942 aa10.54□□□□□ -0.72
UPF3A-212ENST00000619079 DAOAP59103 153 aa10.54□□□□□ -0.72
UPF3A-212ENST00000619079 ASAH1Q13510 395 aa10.54□□□□□ -0.72
UPF3A-212ENST00000619079 KDELC1Q6UW63 502 aa10.54□□□□□ -0.72
UPF3A-212ENST00000619079 KDELC2Q7Z4H8 507 aa10.54□□□□□ -0.72
UPF3A-212ENST00000619079 SPNS2Q8IVW8 549 aa10.54□□□□□ -0.72
UPF3A-212ENST00000619079 VWA5B2Q8N398 1253 aa10.54□□□□□ -0.72
UPF3A-212ENST00000619079 ZMIZ2Q8NF64 920 aa10.54□□□□□ -0.72
UPF3A-212ENST00000619079 GPR150Q8NGU9 434 aa10.54□□□□□ -0.72
UPF3A-212ENST00000619079 PEX13Q92968 403 aa10.54□□□□□ -0.72
UPF3A-212ENST00000619079 ACOX2Q99424 681 aa10.54□□□□□ -0.72
UPF3A-212ENST00000619079 CHCHD6Q9BRQ6 235 aa10.54□□□□□ -0.72
UPF3A-212ENST00000619079 TBCDQ9BTW9 1192 aa10.54□□□□□ -0.72
UPF3A-212ENST00000619079 SLC25A51Q9H1U9 297 aa10.54□□□□□ -0.72
UPF3A-212ENST00000619079 ACTL8Q9H568 366 aa10.54□□□□□ -0.72
UPF3A-212ENST00000619079 ATP13A1Q9HD20 1204 aa10.54□□□□□ -0.72
UPF3A-212ENST00000619079 C1orf109Q9NX04 203 aa10.54□□□□□ -0.72
UPF3A-212ENST00000619079 STOML2Q9UJZ1 356 aa10.54□□□□□ -0.72
UPF3A-212ENST00000619079 ANKRD12Q6UB98 2062 aa10.54□□□□□ -0.72
UPF3A-212ENST00000619079 SMIM35A0A1B0GVV1 85 aa10.54□□□□□ -0.72
UPF3A-212ENST00000619079 CLCA1A8K7I4 914 aa10.54□□□□□ -0.72
UPF3A-212ENST00000619079 TLL1O43897 1013 aa10.54□□□□□ -0.72
UPF3A-212ENST00000619079 KLK8O60259 260 aa10.54□□□□□ -0.72
UPF3A-212ENST00000619079 PCDHGA12O60330 932 aa10.54□□□□□ -0.72
UPF3A-212ENST00000619079 TSPAN1O60635 241 aa10.54□□□□□ -0.72
UPF3A-212ENST00000619079 TMCC2O75069 709 aa10.54□□□□□ -0.72
UPF3A-212ENST00000619079 ECI2O75521 394 aa10.54□□□□□ -0.72
UPF3A-212ENST00000619079 IL6P05231 212 aa10.54□□□□□ -0.72
UPF3A-212ENST00000619079 CAPN1P07384 714 aa10.54□□□□□ -0.72
UPF3A-212ENST00000619079 TNFSF8P32971 234 aa10.54□□□□□ -0.72
UPF3A-212ENST00000619079 PTGS2P35354 604 aa10.54□□□□□ -0.72
UPF3A-212ENST00000619079 ETV3P41162 512 aa10.54□□□□□ -0.72
UPF3A-212ENST00000619079 TEKQ02763 1124 aa10.54□□□□□ -0.72
UPF3A-212ENST00000619079 CREMQ03060 361 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms