RNA–Protein interactions for RNA: ENST00000617998.4

POLR2A-209, Transcript of RNA polymerase II subunit A, humanhuman

TSL 1 (best)

Gene POLR2A, Length 6,751 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2A-209ENST00000617998 STMN3Q9NZ72 180 aa10.63□□□□□ -0.71
POLR2A-209ENST00000617998 PTGFRNQ9P2B2 879 aa10.63□□□□□ -0.71
POLR2A-209ENST00000617998 EIF3KQ9UBQ5 218 aaKnown RBP10.63□□□□□ -0.71
POLR2A-209ENST00000617998 CORO1CQ9ULV4 474 aaPredicted RBP10.63□□□□□ -0.71
POLR2A-209ENST00000617998 BTRCQ9Y297 605 aa10.63□□□□□ -0.71
POLR2A-209ENST00000617998 SPAARA0A1B0GVQ0 90 aa10.63□□□□□ -0.71
POLR2A-209ENST00000617998 SNRPB2P08579 225 aaKnown RBP10.63□□□□□ -0.71
POLR2A-209ENST00000617998 UQCRC1P31930 480 aa10.63□□□□□ -0.71
POLR2A-209ENST00000617998 TAS2R40P59535 323 aa10.63□□□□□ -0.71
POLR2A-209ENST00000617998 KLHDC10Q6PID8 442 aa10.63□□□□□ -0.71
POLR2A-209ENST00000617998 RANBP3LQ86VV4 465 aaPredicted RBP10.63□□□□□ -0.71
POLR2A-209ENST00000617998 NAXDQ8IW45 347 aa10.63□□□□□ -0.71
POLR2A-209ENST00000617998 PEX11GQ96HA9 241 aa10.63□□□□□ -0.71
POLR2A-209ENST00000617998 GPER1Q99527 375 aa10.63□□□□□ -0.71
POLR2A-209ENST00000617998 SH3GL3Q99963 347 aa10.63□□□□□ -0.71
POLR2A-209ENST00000617998 PRSS16Q9NQE7 514 aa10.63□□□□□ -0.71
POLR2A-209ENST00000617998 DUXAA6NLW8 204 aa10.63□□□□□ -0.71
POLR2A-209ENST00000617998 SCO2O43819 266 aa10.63□□□□□ -0.71
POLR2A-209ENST00000617998 ZBTB11O95625 1053 aaPredicted RBP10.63□□□□□ -0.71
POLR2A-209ENST00000617998 MSL3P1P0C860 447 aa10.63□□□□□ -0.71
POLR2A-209ENST00000617998 PSMA4P25789 261 aaKnown RBP10.63□□□□□ -0.71
POLR2A-209ENST00000617998 AK4P27144 223 aaPredicted RBP10.63□□□□□ -0.71
POLR2A-209ENST00000617998 ID2Q02363 134 aa10.63□□□□□ -0.71
POLR2A-209ENST00000617998 PEG10Q86TG7 708 aaKnown RBP10.63□□□□□ -0.71
POLR2A-209ENST00000617998 PLD5Q8N7P1 536 aa10.63□□□□□ -0.71
POLR2A-209ENST00000617998 C4orf32Q8N8J7 132 aa10.63□□□□□ -0.71
POLR2A-209ENST00000617998 TMEM234Q8WY98 164 aa10.63□□□□□ -0.71
POLR2A-209ENST00000617998 RTKNQ9BST9 563 aa10.63□□□□□ -0.71
POLR2A-209ENST00000617998 C6orf106Q9H6K1 298 aaPredicted RBP10.63□□□□□ -0.71
POLR2A-209ENST00000617998 PLEKHA1Q9HB21 404 aa10.63□□□□□ -0.71
POLR2A-209ENST00000617998 MARCH5Q9NX47 278 aa10.63□□□□□ -0.71
POLR2A-209ENST00000617998 ENOPH1Q9UHY7 261 aa10.63□□□□□ -0.71
POLR2A-209ENST00000617998 MCTS1Q9ULC4 181 aaKnown RBP10.63□□□□□ -0.71
POLR2A-209ENST00000617998 CCL26Q9Y258 94 aa10.63□□□□□ -0.71
POLR2A-209ENST00000617998 AP3M1Q9Y2T2 418 aa10.63□□□□□ -0.71
POLR2A-209ENST00000617998 GJE1A6NN92 205 aa10.63□□□□□ -0.71
POLR2A-209ENST00000617998 TULP2O00295 520 aa10.63□□□□□ -0.71
POLR2A-209ENST00000617998 TGFB1P01137 390 aa10.63□□□□□ -0.71
POLR2A-209ENST00000617998 TBL3Q12788 808 aaKnown RBP10.63□□□□□ -0.71
POLR2A-209ENST00000617998 WLSQ5T9L3 541 aa10.63□□□□□ -0.71
POLR2A-209ENST00000617998 ZCCHC12Q6PEW1 402 aa10.63□□□□□ -0.71
POLR2A-209ENST00000617998 SUSD1Q6UWL2 747 aa10.63□□□□□ -0.71
POLR2A-209ENST00000617998 LRRTM3Q86VH5 581 aa10.63□□□□□ -0.71
POLR2A-209ENST00000617998 ZNF516Q92618 1163 aa10.63□□□□□ -0.71
POLR2A-209ENST00000617998 TSSK3Q96PN8 268 aa10.63□□□□□ -0.71
POLR2A-209ENST00000617998 FGFBP2Q9BYJ0 223 aa10.63□□□□□ -0.71
POLR2A-209ENST00000617998 EFCAB1Q9HAE3 211 aa10.63□□□□□ -0.71
POLR2A-209ENST00000617998 TMLHEQ9NVH6 421 aa10.63□□□□□ -0.71
POLR2A-209ENST00000617998 PCDH10Q9P2E7 1040 aa10.63□□□□□ -0.71
POLR2A-209ENST00000617998 THAP10Q9P2Z0 257 aaPredicted RBP10.63□□□□□ -0.71
POLR2A-209ENST00000617998 ZNF282Q9UDV7 671 aaPredicted RBP10.63□□□□□ -0.71
POLR2A-209ENST00000617998 SLC9B1P1A6NJY1 282 aa10.63□□□□□ -0.71
POLR2A-209ENST00000617998 RFXANKO14593 260 aa10.63□□□□□ -0.71
POLR2A-209ENST00000617998 ATP6V1B2P21281 511 aa10.63□□□□□ -0.71
POLR2A-209ENST00000617998 PPIBP23284 216 aaKnown RBP10.63□□□□□ -0.71
POLR2A-209ENST00000617998 EEFSECP57772 596 aaKnown RBP10.63□□□□□ -0.71
POLR2A-209ENST00000617998 SLC35G1Q2M3R5 365 aa10.63□□□□□ -0.71
POLR2A-209ENST00000617998 SIRPB2Q5JXA9 342 aa10.63□□□□□ -0.71
POLR2A-209ENST00000617998 PLEKHA7Q6IQ23 1121 aa10.63□□□□□ -0.71
POLR2A-209ENST00000617998 IGSF8Q969P0 613 aa10.63□□□□□ -0.71
POLR2A-209ENST00000617998 SEC14L3Q9UDX4 400 aa10.63□□□□□ -0.71
POLR2A-209ENST00000617998 SLC24A2Q9UI40 661 aa10.63□□□□□ -0.71
POLR2A-209ENST00000617998 SIX4Q9UIU6 781 aa10.63□□□□□ -0.71
POLR2A-209ENST00000617998 HS3ST3A1Q9Y663 406 aa10.63□□□□□ -0.71
POLR2A-209ENST00000617998 ASNA1O43681 348 aa10.63□□□□□ -0.71
POLR2A-209ENST00000617998 LIASO43766 372 aa10.63□□□□□ -0.71
POLR2A-209ENST00000617998 KLRC4O43908 158 aa10.63□□□□□ -0.71
POLR2A-209ENST00000617998 ATP5HO75947 161 aa10.63□□□□□ -0.71
POLR2A-209ENST00000617998 CKMT2P17540 419 aa10.63□□□□□ -0.71
POLR2A-209ENST00000617998 HSD17B3P37058 310 aa10.63□□□□□ -0.71
POLR2A-209ENST00000617998 DCDP81605 110 aaKnown RBP10.63□□□□□ -0.71
POLR2A-209ENST00000617998 EIF3IQ13347 325 aaKnown RBP10.63□□□□□ -0.71
POLR2A-209ENST00000617998 TMEM225Q6GV28 225 aa10.63□□□□□ -0.71
POLR2A-209ENST00000617998 TMEM200AQ86VY9 491 aa10.63□□□□□ -0.71
POLR2A-209ENST00000617998 ARMC8Q8IUR7 673 aa10.63□□□□□ -0.71
POLR2A-209ENST00000617998 LNX2Q8N448 690 aa10.63□□□□□ -0.71
POLR2A-209ENST00000617998 LYARQ9NX58 379 aaKnown RBP10.63□□□□□ -0.71
POLR2A-209ENST00000617998 NXT1Q9UKK6 140 aaKnown RBP10.63□□□□□ -0.71
POLR2A-209ENST00000617998 RGSL1A5PLK6 1076 aa10.62□□□□□ -0.71
POLR2A-209ENST00000617998 STMND1H3BQB6 276 aa10.62□□□□□ -0.71
POLR2A-209ENST00000617998 AP1S2P56377 157 aa10.62□□□□□ -0.71
POLR2A-209ENST00000617998 PPIDQ08752 370 aaKnown RBP10.62□□□□□ -0.71
POLR2A-209ENST00000617998 NOMO1Q15155 1222 aa10.62□□□□□ -0.71
POLR2A-209ENST00000617998 MEA1Q16626 185 aa10.62□□□□□ -0.71
POLR2A-209ENST00000617998 SAMD4BQ5PRF9 694 aaKnown RBP10.62□□□□□ -0.71
POLR2A-209ENST00000617998 RAD9BQ6WBX8 426 aa10.62□□□□□ -0.71
POLR2A-209ENST00000617998 PRELID2Q8N945 189 aa10.62□□□□□ -0.71
POLR2A-209ENST00000617998 EPYCQ99645 322 aa10.62□□□□□ -0.71
POLR2A-209ENST00000617998 CCNB1IP1Q9NPC3 277 aa10.62□□□□□ -0.71
POLR2A-209ENST00000617998 CHRAC1Q9NRG0 131 aa10.62□□□□□ -0.71
POLR2A-209ENST00000617998 GON4LQ3T8J9 2241 aa10.62□□□□□ -0.71
POLR2A-209ENST00000617998 CCDC162PA2VCL2 907 aa10.62□□□□□ -0.71
POLR2A-209ENST00000617998 H3BQF6 201 aa10.62□□□□□ -0.71
POLR2A-209ENST00000617998 RBMXL2O75526 392 aaKnown RBP10.62□□□□□ -0.71
POLR2A-209ENST00000617998 DNASE1L1P49184 302 aa10.62□□□□□ -0.71
POLR2A-209ENST00000617998 GSTM4Q03013 218 aa10.62□□□□□ -0.71
POLR2A-209ENST00000617998 GTF2H2Q13888 395 aa10.62□□□□□ -0.71
POLR2A-209ENST00000617998 NCF4Q15080 339 aa10.62□□□□□ -0.71
POLR2A-209ENST00000617998 GTF2H2CQ6P1K8 395 aa10.62□□□□□ -0.71
POLR2A-209ENST00000617998 GRAMD2AQ8IUY3 354 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms