RNA–Protein interactions for RNA: ENST00000617103.4

CLTCL1-209, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,859 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-209ENST00000617103 ELMOD2Q8IZ81 293 aa10.42□□□□□ -0.74
CLTCL1-209ENST00000617103 AHCYL2Q96HN2 611 aaKnown RBP10.42□□□□□ -0.74
CLTCL1-209ENST00000617103 MAF1Q9H063 256 aa10.42□□□□□ -0.74
CLTCL1-209ENST00000617103 SPATA7Q9P0W8 599 aa10.42□□□□□ -0.74
CLTCL1-209ENST00000617103 VPS29Q9UBQ0 182 aa10.42□□□□□ -0.74
CLTCL1-209ENST00000617103 ZNF639Q9UID6 485 aa10.42□□□□□ -0.74
CLTCL1-209ENST00000617103 CNOT11Q9UKZ1 510 aaKnown RBP10.42□□□□□ -0.74
CLTCL1-209ENST00000617103 HCN2Q9UL51 889 aa10.42□□□□□ -0.74
CLTCL1-209ENST00000617103 COL5A2P05997 1499 aaPredicted RBP10.42□□□□□ -0.74
CLTCL1-209ENST00000617103 MYBPHLA2RUH7 354 aa10.42□□□□□ -0.74
CLTCL1-209ENST00000617103 INMT-MINDY4F8WBC2 141 aa10.42□□□□□ -0.74
CLTCL1-209ENST00000617103 PCDH7O60245 1069 aa10.42□□□□□ -0.74
CLTCL1-209ENST00000617103 NIPSNAP2O75323 286 aa10.42□□□□□ -0.74
CLTCL1-209ENST00000617103 GSTT2P0CG29 244 aa10.42□□□□□ -0.74
CLTCL1-209ENST00000617103 LMO2P25791 158 aa10.42□□□□□ -0.74
CLTCL1-209ENST00000617103 GBX2P52951 348 aaPredicted RBP10.42□□□□□ -0.74
CLTCL1-209ENST00000617103 CEBPGP53567 150 aa10.42□□□□□ -0.74
CLTCL1-209ENST00000617103 SF1Q15637 639 aaKnown RBP10.42□□□□□ -0.74
CLTCL1-209ENST00000617103 TMEM236Q5W0B7 351 aa10.42□□□□□ -0.74
CLTCL1-209ENST00000617103 OR4F3Q6IEY1 312 aa10.42□□□□□ -0.74
CLTCL1-209ENST00000617103 SLC30A6Q6NXT4 461 aa10.42□□□□□ -0.74
CLTCL1-209ENST00000617103 PLCZ1Q86YW0 608 aa10.42□□□□□ -0.74
CLTCL1-209ENST00000617103 AKAP1Q92667 903 aaKnown RBP eCLIP10.42□□□□□ -0.74
CLTCL1-209ENST00000617103 CREB3L1Q96BA8 519 aa10.42□□□□□ -0.74
CLTCL1-209ENST00000617103 SNX27Q96L92 541 aa10.42□□□□□ -0.74
CLTCL1-209ENST00000617103 ZNF558Q96NG5 402 aa10.42□□□□□ -0.74
CLTCL1-209ENST00000617103 ZNF717Q9BY31 904 aaPredicted RBP10.42□□□□□ -0.74
CLTCL1-209ENST00000617103 HPF1Q9NWY4 346 aa10.42□□□□□ -0.74
CLTCL1-209ENST00000617103 MKS1Q9NXB0 559 aa10.42□□□□□ -0.74
CLTCL1-209ENST00000617103 MRTO4Q9UKD2 239 aaKnown RBP10.42□□□□□ -0.74
CLTCL1-209ENST00000617103 PREX1Q8TCU6 1659 aa10.42□□□□□ -0.74
CLTCL1-209ENST00000617103 A0A075B6Q4 140 aa10.42□□□□□ -0.74
CLTCL1-209ENST00000617103 FXYD6-FXYD2A0A087WZ82 144 aa10.42□□□□□ -0.74
CLTCL1-209ENST00000617103 GRM6O15303 877 aa10.42□□□□□ -0.74
CLTCL1-209ENST00000617103 CHRNA1P02708 482 aa10.42□□□□□ -0.74
CLTCL1-209ENST00000617103 RLN2P04090 185 aa10.42□□□□□ -0.74
CLTCL1-209ENST00000617103 H1F0P07305 194 aaKnown RBP10.42□□□□□ -0.74
CLTCL1-209ENST00000617103 SRPRAP08240 638 aaKnown RBP10.42□□□□□ -0.74
CLTCL1-209ENST00000617103 OR4Q2P0C623 313 aa10.42□□□□□ -0.74
CLTCL1-209ENST00000617103 GIMD1P0DJR0 217 aa10.42□□□□□ -0.74
CLTCL1-209ENST00000617103 PROZP22891 400 aa10.42□□□□□ -0.74
CLTCL1-209ENST00000617103 PPP3R1P63098 170 aa10.42□□□□□ -0.74
CLTCL1-209ENST00000617103 LINC00471Q8N535 108 aa10.42□□□□□ -0.74
CLTCL1-209ENST00000617103 C2orf73Q8N5S3 287 aaPredicted RBP10.42□□□□□ -0.74
CLTCL1-209ENST00000617103 EFHD2Q96C19 240 aaPredicted RBP10.42□□□□□ -0.74
CLTCL1-209ENST00000617103 CDKN2AIPNLQ96HQ2 116 aa10.42□□□□□ -0.74
CLTCL1-209ENST00000617103 FXYD6Q9H0Q3 95 aa10.42□□□□□ -0.74
CLTCL1-209ENST00000617103 FZD8Q9H461 694 aa10.42□□□□□ -0.74
CLTCL1-209ENST00000617103 FBRSL1Q9HCM7 1045 aaKnown RBP10.42□□□□□ -0.74
CLTCL1-209ENST00000617103 FARSBQ9NSD9 589 aaKnown RBP10.42□□□□□ -0.74
CLTCL1-209ENST00000617103 PAK1IP1Q9NWT1 392 aaPredicted RBP10.42□□□□□ -0.74
CLTCL1-209ENST00000617103 SOHLH2Q9NX45 425 aa10.42□□□□□ -0.74
CLTCL1-209ENST00000617103 PCDHGB1Q9Y5G3 927 aa10.42□□□□□ -0.74
CLTCL1-209ENST00000617103 GOLGA4Q13439 2230 aaKnown RBP10.42□□□□□ -0.74
CLTCL1-209ENST00000617103 KIDINS220Q9ULH0 1771 aa10.42□□□□□ -0.74
CLTCL1-209ENST00000617103 KHKP50053 298 aa10.41□□□□□ -0.74
CLTCL1-209ENST00000617103 SMSP52788 366 aa10.41□□□□□ -0.74
CLTCL1-209ENST00000617103 CEACAM7Q14002 265 aa10.41□□□□□ -0.74
CLTCL1-209ENST00000617103 PRAMEF17Q5VTA0 474 aa10.41□□□□□ -0.74
CLTCL1-209ENST00000617103 LRP10Q7Z4F1 713 aa10.41□□□□□ -0.74
CLTCL1-209ENST00000617103 CAND1Q86VP6 1230 aaKnown RBP10.41□□□□□ -0.74
CLTCL1-209ENST00000617103 ANKRD13BQ86YJ7 626 aa10.41□□□□□ -0.74
CLTCL1-209ENST00000617103 SLC15A3Q8IY34 581 aa10.41□□□□□ -0.74
CLTCL1-209ENST00000617103 CORO1BQ9BR76 489 aa10.41□□□□□ -0.74
CLTCL1-209ENST00000617103 UCK2Q9BZX2 261 aa10.41□□□□□ -0.74
CLTCL1-209ENST00000617103 IFT46Q9NQC8 304 aa10.41□□□□□ -0.74
CLTCL1-209ENST00000617103 CTPS2Q9NRF8 586 aa10.41□□□□□ -0.74
CLTCL1-209ENST00000617103 WRAP73Q9P2S5 460 aaPredicted RBP10.41□□□□□ -0.74
CLTCL1-209ENST00000617103 TNFRSF10DQ9UBN6 386 aa10.41□□□□□ -0.74
CLTCL1-209ENST00000617103 MGAT4AQ9UM21 535 aa10.41□□□□□ -0.74
CLTCL1-209ENST00000617103 ERVK-11Q9UQG0 969 aa10.41□□□□□ -0.74
CLTCL1-209ENST00000617103 PSAT1Q9Y617 370 aa10.41□□□□□ -0.74
CLTCL1-209ENST00000617103 SLIT3O75094 1523 aa10.41□□□□□ -0.74
CLTCL1-209ENST00000617103 A8MV72 311 aaPredicted RBP10.41□□□□□ -0.74
CLTCL1-209ENST00000617103 E7ESA3 106 aa10.41□□□□□ -0.74
CLTCL1-209ENST00000617103 ARL6IP5O75915 188 aa10.41□□□□□ -0.74
CLTCL1-209ENST00000617103 OPN1SWP03999 348 aa10.41□□□□□ -0.74
CLTCL1-209ENST00000617103 HLA-DQB2P05538 268 aa10.41□□□□□ -0.74
CLTCL1-209ENST00000617103 F7P08709 466 aaPredicted RBP10.41□□□□□ -0.74
CLTCL1-209ENST00000617103 G6PDP11413 515 aa10.41□□□□□ -0.74
CLTCL1-209ENST00000617103 HTR1BP28222 390 aa10.41□□□□□ -0.74
CLTCL1-209ENST00000617103 OR1D2P34982 312 aa10.41□□□□□ -0.74
CLTCL1-209ENST00000617103 EMX2Q04743 252 aa10.41□□□□□ -0.74
CLTCL1-209ENST00000617103 DGKZQ13574 1117 aa10.41□□□□□ -0.74
CLTCL1-209ENST00000617103 CAMK1Q14012 370 aa10.41□□□□□ -0.74
CLTCL1-209ENST00000617103 DUOXA1Q1HG43 343 aa10.41□□□□□ -0.74
CLTCL1-209ENST00000617103 CDCA2Q69YH5 1023 aaPredicted RBP10.41□□□□□ -0.74
CLTCL1-209ENST00000617103 GALNTL5Q7Z4T8 443 aa10.41□□□□□ -0.74
CLTCL1-209ENST00000617103 NEK7Q8TDX7 302 aa10.41□□□□□ -0.74
CLTCL1-209ENST00000617103 OR8D1Q8WZ84 308 aa10.41□□□□□ -0.74
CLTCL1-209ENST00000617103 LGALS12Q96DT0 336 aa10.41□□□□□ -0.74
CLTCL1-209ENST00000617103 HERC2P3Q9BVR0 1158 aa10.41□□□□□ -0.74
CLTCL1-209ENST00000617103 MEMO1Q9Y316 297 aa10.41□□□□□ -0.74
CLTCL1-209ENST00000617103 TRBC2A0A5B9 178 aa10.41□□□□□ -0.74
CLTCL1-209ENST00000617103 PQBP1O60828 265 aaKnown RBP10.41□□□□□ -0.74
CLTCL1-209ENST00000617103 CCBE1Q6UXH8 406 aaPredicted RBP10.41□□□□□ -0.74
CLTCL1-209ENST00000617103 ADGRD2Q7Z7M1 963 aa10.41□□□□□ -0.74
CLTCL1-209ENST00000617103 PARGQ86W56 976 aa10.41□□□□□ -0.74
CLTCL1-209ENST00000617103 PHYKPLQ8IUZ5 450 aa10.41□□□□□ -0.74
CLTCL1-209ENST00000617103 ZNF548Q8NEK5 533 aaPredicted RBP10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms