RNA–Protein interactions for RNA: ENST00000617054.1

NEK3-207, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 3,256 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-207ENST00000617054 ANKRD46Q86W74 232 aa7.56□□□□□ -1.2
NEK3-207ENST00000617054 TP53I13Q8NBR0 393 aaPredicted RBP7.56□□□□□ -1.2
NEK3-207ENST00000617054 BHLHE22Q8NFJ8 381 aaPredicted RBP7.56□□□□□ -1.2
NEK3-207ENST00000617054 OR2L2Q8NH16 312 aa7.56□□□□□ -1.2
NEK3-207ENST00000617054 UBTD2Q8WUN7 234 aa7.56□□□□□ -1.2
NEK3-207ENST00000617054 TFGQ92734 400 aaPredicted RBP7.56□□□□□ -1.2
NEK3-207ENST00000617054 APOLD1Q96LR9 279 aa7.56□□□□□ -1.2
NEK3-207ENST00000617054 SPNS1Q9H2V7 528 aa7.56□□□□□ -1.2
NEK3-207ENST00000617054 XKR8Q9H6D3 395 aa7.56□□□□□ -1.2
NEK3-207ENST00000617054 LMCD1Q9NZU5 365 aa7.56□□□□□ -1.2
NEK3-207ENST00000617054 AK5Q9Y6K8 562 aa7.56□□□□□ -1.2
NEK3-207ENST00000617054 PCM1Q15154 2024 aa7.55□□□□□ -1.2
NEK3-207ENST00000617054 MGAT4DA6NG13 374 aa7.55□□□□□ -1.2
NEK3-207ENST00000617054 AKAP10O43572 662 aa7.55□□□□□ -1.2
NEK3-207ENST00000617054 ENO2P09104 434 aaPredicted RBP7.55□□□□□ -1.2
NEK3-207ENST00000617054 ACADMP11310 421 aa7.55□□□□□ -1.2
NEK3-207ENST00000617054 ADSLP30566 484 aaPredicted RBP7.55□□□□□ -1.2
NEK3-207ENST00000617054 KCNK10P57789 538 aa7.55□□□□□ -1.2
NEK3-207ENST00000617054 FLOT2Q14254 428 aa7.55□□□□□ -1.2
NEK3-207ENST00000617054 HERC3Q15034 1050 aa7.55□□□□□ -1.2
NEK3-207ENST00000617054 TRMT5Q32P41 509 aaKnown RBP7.55□□□□□ -1.2
NEK3-207ENST00000617054 OXLD1Q5BKU9 147 aa7.55□□□□□ -1.2
NEK3-207ENST00000617054 RALGPS2Q86X27 583 aaPredicted RBP7.55□□□□□ -1.2
NEK3-207ENST00000617054 FAM160A2Q8N612 972 aaPredicted RBP7.55□□□□□ -1.2
NEK3-207ENST00000617054 DEFB119Q8N690 84 aa7.55□□□□□ -1.2
NEK3-207ENST00000617054 CCL4L1Q8NHW4 92 aa7.55□□□□□ -1.2
NEK3-207ENST00000617054 RLN3Q8WXF3 142 aa7.55□□□□□ -1.2
NEK3-207ENST00000617054 CCDC138Q96M89 665 aa7.55□□□□□ -1.2
NEK3-207ENST00000617054 PPM1MQ96MI6 270 aa7.55□□□□□ -1.2
NEK3-207ENST00000617054 GABRG3Q99928 467 aa7.55□□□□□ -1.2
NEK3-207ENST00000617054 ZCCHC2Q9C0B9 1178 aaKnown RBP7.55□□□□□ -1.2
NEK3-207ENST00000617054 OR52A5Q9H2C5 316 aa7.55□□□□□ -1.2
NEK3-207ENST00000617054 EBF2Q9HAK2 575 aa7.55□□□□□ -1.2
NEK3-207ENST00000617054 LRTM1Q9HBL6 345 aa7.55□□□□□ -1.2
NEK3-207ENST00000617054 CROTQ9UKG9 612 aa7.55□□□□□ -1.2
NEK3-207ENST00000617054 PNMA8BQ9ULN7 279 aaPredicted RBP7.55□□□□□ -1.2
NEK3-207ENST00000617054 CA14Q9ULX7 337 aa7.55□□□□□ -1.2
NEK3-207ENST00000617054 KCNE1BA0A087WTH5 132 aa7.55□□□□□ -1.2
NEK3-207ENST00000617054 MAGEB17A8MXT2 336 aa7.55□□□□□ -1.2
NEK3-207ENST00000617054 QSOX1O00391 747 aa7.55□□□□□ -1.2
NEK3-207ENST00000617054 IFRD1O00458 451 aaPredicted RBP7.55□□□□□ -1.2
NEK3-207ENST00000617054 SLC22A2O15244 555 aa7.55□□□□□ -1.2
NEK3-207ENST00000617054 MBTPS2O43462 519 aa7.55□□□□□ -1.2
NEK3-207ENST00000617054 RGS14O43566 566 aa7.55□□□□□ -1.2
NEK3-207ENST00000617054 STATHP02808 62 aa7.55□□□□□ -1.2
NEK3-207ENST00000617054 ANPEPP15144 967 aa7.55□□□□□ -1.2
NEK3-207ENST00000617054 NPPBP16860 134 aa7.55□□□□□ -1.2
NEK3-207ENST00000617054 ACADLP28330 430 aa7.55□□□□□ -1.2
NEK3-207ENST00000617054 IGFALSP35858 605 aa7.55□□□□□ -1.2
NEK3-207ENST00000617054 GNPDA1P46926 289 aa7.55□□□□□ -1.2
NEK3-207ENST00000617054 AP1S2P56377 157 aa7.55□□□□□ -1.2
NEK3-207ENST00000617054 RPS21P63220 83 aaKnown RBP7.55□□□□□ -1.2
NEK3-207ENST00000617054 CDC16Q13042 620 aa7.55□□□□□ -1.2
NEK3-207ENST00000617054 NFYCQ13952 458 aa7.55□□□□□ -1.2
NEK3-207ENST00000617054 FAM174BQ3ZCQ3 159 aa7.55□□□□□ -1.2
NEK3-207ENST00000617054 BCL7AQ4VC05 210 aa7.55□□□□□ -1.2
NEK3-207ENST00000617054 LPCAT4Q643R3 524 aa7.55□□□□□ -1.2
NEK3-207ENST00000617054 OGFOD2Q6N063 350 aa7.55□□□□□ -1.2
NEK3-207ENST00000617054 ANKRD26P1Q6NSI1 321 aa7.55□□□□□ -1.2
NEK3-207ENST00000617054 ZNF765Q7L2R6 523 aa7.55□□□□□ -1.2
NEK3-207ENST00000617054 SPATA19Q7Z5L4 167 aa7.55□□□□□ -1.2
NEK3-207ENST00000617054 LRRTM4Q86VH4 590 aa7.55□□□□□ -1.2
NEK3-207ENST00000617054 GPR156Q8NFN8 814 aa7.55□□□□□ -1.2
NEK3-207ENST00000617054 TSACCQ96A04 125 aaPredicted RBP7.55□□□□□ -1.2
NEK3-207ENST00000617054 FBXL8Q96CD0 374 aa7.55□□□□□ -1.2
NEK3-207ENST00000617054 PRO3102Q9H379 93 aa7.55□□□□□ -1.2
NEK3-207ENST00000617054 IMP3Q9NV31 184 aaKnown RBP7.55□□□□□ -1.2
NEK3-207ENST00000617054 SUFUQ9UMX1 484 aa7.55□□□□□ -1.2
NEK3-207ENST00000617054 NME4O00746 187 aa7.54□□□□□ -1.2
NEK3-207ENST00000617054 LIN7AO14910 233 aaPredicted RBP7.54□□□□□ -1.2
NEK3-207ENST00000617054 PLRG1O43660 514 aaKnown RBP7.54□□□□□ -1.2
NEK3-207ENST00000617054 BCKDHAP12694 445 aa7.54□□□□□ -1.2
NEK3-207ENST00000617054 NCK1P16333 377 aa7.54□□□□□ -1.2
NEK3-207ENST00000617054 ME2P23368 584 aa7.54□□□□□ -1.2
NEK3-207ENST00000617054 AK4P27144 223 aaPredicted RBP7.54□□□□□ -1.2
NEK3-207ENST00000617054 ACADVLP49748 655 aa7.54□□□□□ -1.2
NEK3-207ENST00000617054 TPMTP51580 245 aa7.54□□□□□ -1.2
NEK3-207ENST00000617054 TAP2Q03519 686 aa7.54□□□□□ -1.2
NEK3-207ENST00000617054 EMX2Q04743 252 aa7.54□□□□□ -1.2
NEK3-207ENST00000617054 GSTA3Q16772 222 aa7.54□□□□□ -1.2
NEK3-207ENST00000617054 ZNF542PQ5EBM4 170 aa7.54□□□□□ -1.2
NEK3-207ENST00000617054 SPANXN4Q5MJ08 99 aa7.54□□□□□ -1.2
NEK3-207ENST00000617054 FAM180BQ6P0A1 224 aa7.54□□□□□ -1.2
NEK3-207ENST00000617054 ADAMTSL4Q6UY14 1074 aa7.54□□□□□ -1.2
NEK3-207ENST00000617054 LRRC70Q7Z2Q7 622 aa7.54□□□□□ -1.2
NEK3-207ENST00000617054 SPATA24Q86W54 205 aa7.54□□□□□ -1.2
NEK3-207ENST00000617054 FAM3CQ92520 227 aa7.54□□□□□ -1.2
NEK3-207ENST00000617054 USP7Q93009 1102 aa7.54□□□□□ -1.2
NEK3-207ENST00000617054 LRRC58Q96CX6 371 aa7.54□□□□□ -1.2
NEK3-207ENST00000617054 NECTIN4Q96NY8 510 aa7.54□□□□□ -1.2
NEK3-207ENST00000617054 SGK2Q9HBY8 427 aa7.54□□□□□ -1.2
NEK3-207ENST00000617054 PRDM8Q9NQV8 689 aa7.54□□□□□ -1.2
NEK3-207ENST00000617054 SLC6A13Q9NSD5 602 aa7.54□□□□□ -1.2
NEK3-207ENST00000617054 EBF1Q9UH73 591 aa7.54□□□□□ -1.2
NEK3-207ENST00000617054 TRPS1Q9UHF7 1281 aa7.54□□□□□ -1.2
NEK3-207ENST00000617054 GPR34Q9UPC5 381 aa7.54□□□□□ -1.2
NEK3-207ENST00000617054 INVSQ9Y283 1065 aa7.54□□□□□ -1.2
NEK3-207ENST00000617054 SLCO1B1Q9Y6L6 691 aa7.54□□□□□ -1.2
NEK3-207ENST00000617054 TDRD6O60522 2096 aaKnown RBP7.54□□□□□ -1.2
NEK3-207ENST00000617054 FXYD1O00168 92 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms