RNA–Protein interactions for RNA: ENST00000616952.1

AP003900.1-202, humanhuman

TSL 3

Gene AP003900.1, Length 225 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003900.1-202ENST00000616952 USP8P40818 1118 aa9.63□□□□□ -0.87
AP003900.1-202ENST00000616952 CETN1Q12798 172 aa9.63□□□□□ -0.87
AP003900.1-202ENST00000616952 GTF2H3Q13889 308 aa9.63□□□□□ -0.87
AP003900.1-202ENST00000616952 CCDC14Q49A88 953 aa9.63□□□□□ -0.87
AP003900.1-202ENST00000616952 C2CD6Q53TS8 623 aa9.63□□□□□ -0.87
AP003900.1-202ENST00000616952 C20orf204Q6ZNR8 217 aa9.63□□□□□ -0.87
AP003900.1-202ENST00000616952 STRADAQ7RTN6 431 aa9.63□□□□□ -0.87
AP003900.1-202ENST00000616952 SLFN11Q7Z7L1 901 aa9.63□□□□□ -0.87
AP003900.1-202ENST00000616952 CRLF3Q8IUI8 442 aa9.63□□□□□ -0.87
AP003900.1-202ENST00000616952 TRAM1L1Q8N609 369 aa9.63□□□□□ -0.87
AP003900.1-202ENST00000616952 IMMP1LQ96LU5 166 aa9.63□□□□□ -0.87
AP003900.1-202ENST00000616952 ZNF599Q96NL3 588 aa9.63□□□□□ -0.87
AP003900.1-202ENST00000616952 LYSMD1Q96S90 227 aa9.63□□□□□ -0.87
AP003900.1-202ENST00000616952 NRTNQ99748 197 aa9.63□□□□□ -0.87
AP003900.1-202ENST00000616952 METTL5Q9NRN9 209 aaKnown RBP9.63□□□□□ -0.87
AP003900.1-202ENST00000616952 TMEM160Q9NX00 188 aa9.63□□□□□ -0.87
AP003900.1-202ENST00000616952 IL1RAPL1Q9NZN1 696 aa9.63□□□□□ -0.87
AP003900.1-202ENST00000616952 ZNF282Q9UDV7 671 aaPredicted RBP9.63□□□□□ -0.87
AP003900.1-202ENST00000616952 MTRF1LQ9UGC7 380 aaKnown RBP9.63□□□□□ -0.87
AP003900.1-202ENST00000616952 COLEC10Q9Y6Z7 277 aa9.63□□□□□ -0.87
AP003900.1-202ENST00000616952 LOC102723996A0A087X1L8 192 aa9.62□□□□□ -0.87
AP003900.1-202ENST00000616952 GABRR3A8MPY1 467 aa9.62□□□□□ -0.87
AP003900.1-202ENST00000616952 DVL2O14641 736 aa9.62□□□□□ -0.87
AP003900.1-202ENST00000616952 POP7O75817 140 aaKnown RBP9.62□□□□□ -0.87
AP003900.1-202ENST00000616952 SLC35G4P0C7Q5 338 aa9.62□□□□□ -0.87
AP003900.1-202ENST00000616952 PAX1P15863 534 aa9.62□□□□□ -0.87
AP003900.1-202ENST00000616952 SRD5A1P18405 259 aa9.62□□□□□ -0.87
AP003900.1-202ENST00000616952 KRT9P35527 623 aa9.62□□□□□ -0.87
AP003900.1-202ENST00000616952 NR0B1P51843 470 aaKnown RBP9.62□□□□□ -0.87
AP003900.1-202ENST00000616952 EMP2P54851 167 aa9.62□□□□□ -0.87
AP003900.1-202ENST00000616952 DCDC1P59894 354 aa9.62□□□□□ -0.87
AP003900.1-202ENST00000616952 TPI1P60174 286 aa9.62□□□□□ -0.87
AP003900.1-202ENST00000616952 KRT33BQ14525 404 aa9.62□□□□□ -0.87
AP003900.1-202ENST00000616952 STK38Q15208 465 aa9.62□□□□□ -0.87
AP003900.1-202ENST00000616952 MEP1AQ16819 746 aa9.62□□□□□ -0.87
AP003900.1-202ENST00000616952 ANKRD20A8PQ5CZ79 823 aa9.62□□□□□ -0.87
AP003900.1-202ENST00000616952 RIPPLY2Q5TAB7 128 aa9.62□□□□□ -0.87
AP003900.1-202ENST00000616952 METRNLQ641Q3 311 aa9.62□□□□□ -0.87
AP003900.1-202ENST00000616952 H3F3CQ6NXT2 135 aa9.62□□□□□ -0.87
AP003900.1-202ENST00000616952 DNAJC22Q8N4W6 341 aa9.62□□□□□ -0.87
AP003900.1-202ENST00000616952 DTWD1Q8N5C7 304 aa9.62□□□□□ -0.87
AP003900.1-202ENST00000616952 GPT2Q8TD30 523 aa9.62□□□□□ -0.87
AP003900.1-202ENST00000616952 CCHCR1Q8TD31 782 aa9.62□□□□□ -0.87
AP003900.1-202ENST00000616952 CREB3L4Q8TEY5 395 aa9.62□□□□□ -0.87
AP003900.1-202ENST00000616952 FAM172AQ8WUF8 416 aa9.62□□□□□ -0.87
AP003900.1-202ENST00000616952 PAGE5Q96GU1 130 aa9.62□□□□□ -0.87
AP003900.1-202ENST00000616952 NPAS2Q99743 824 aa9.62□□□□□ -0.87
AP003900.1-202ENST00000616952 TUBB6Q9BUF5 446 aa9.62□□□□□ -0.87
AP003900.1-202ENST00000616952 SHARPINQ9H0F6 387 aa9.62□□□□□ -0.87
AP003900.1-202ENST00000616952 UPF2Q9HAU5 1272 aaKnown RBP9.62□□□□□ -0.87
AP003900.1-202ENST00000616952 UBE2TQ9NPD8 197 aaPredicted RBP9.62□□□□□ -0.87
AP003900.1-202ENST00000616952 EURLQ9NYK6 297 aa9.62□□□□□ -0.87
AP003900.1-202ENST00000616952 EIF3LQ9Y262 564 aaKnown RBP9.62□□□□□ -0.87
AP003900.1-202ENST00000616952 CR1P17927 2039 aa9.61□□□□□ -0.87
AP003900.1-202ENST00000616952 POM121CA8CG34 1229 aa9.61□□□□□ -0.87
AP003900.1-202ENST00000616952 BCKDKO14874 412 aa9.61□□□□□ -0.87
AP003900.1-202ENST00000616952 UGT2B7P16662 529 aa9.61□□□□□ -0.87
AP003900.1-202ENST00000616952 PBLDP30039 288 aaPredicted RBP9.61□□□□□ -0.87
AP003900.1-202ENST00000616952 DSC2Q02487 901 aa9.61□□□□□ -0.87
AP003900.1-202ENST00000616952 CLEC12BQ2HXU8 276 aa9.61□□□□□ -0.87
AP003900.1-202ENST00000616952 YOD1Q5VVQ6 348 aaPredicted RBP9.61□□□□□ -0.87
AP003900.1-202ENST00000616952 ADGRF3Q8IZF5 1079 aa9.61□□□□□ -0.87
AP003900.1-202ENST00000616952 NPWQ8N729 165 aa9.61□□□□□ -0.87
AP003900.1-202ENST00000616952 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.61□□□□□ -0.87
AP003900.1-202ENST00000616952 GPR26Q8NDV2 337 aa9.61□□□□□ -0.87
AP003900.1-202ENST00000616952 RXFP2Q8WXD0 754 aa9.61□□□□□ -0.87
AP003900.1-202ENST00000616952 RMDN2Q96LZ7 410 aa9.61□□□□□ -0.87
AP003900.1-202ENST00000616952 DACH2Q96NX9 599 aa9.61□□□□□ -0.87
AP003900.1-202ENST00000616952 PLCD4Q9BRC7 762 aa9.61□□□□□ -0.87
AP003900.1-202ENST00000616952 SCAND2PQ9GZW5 306 aaPredicted RBP9.61□□□□□ -0.87
AP003900.1-202ENST00000616952 SMC3Q9UQE7 1217 aa9.61□□□□□ -0.87
AP003900.1-202ENST00000616952 DDX3XO00571 662 aaKnown RBP eCLIP9.6□□□□□ -0.87
AP003900.1-202ENST00000616952 P4HA2O15460 535 aa9.6□□□□□ -0.87
AP003900.1-202ENST00000616952 PEX11BO96011 259 aa9.6□□□□□ -0.87
AP003900.1-202ENST00000616952 PTPN9P43378 593 aa9.6□□□□□ -0.87
AP003900.1-202ENST00000616952 EFNA3P52797 238 aa9.6□□□□□ -0.87
AP003900.1-202ENST00000616952 ATP5J2P56134 94 aa9.6□□□□□ -0.87
AP003900.1-202ENST00000616952 TMEM115Q12893 351 aaPredicted RBP9.6□□□□□ -0.87
AP003900.1-202ENST00000616952 BTBD16Q32M84 506 aa9.6□□□□□ -0.87
AP003900.1-202ENST00000616952 C1orf185Q5T7R7 199 aa9.6□□□□□ -0.87
AP003900.1-202ENST00000616952 FBXO42Q6P3S6 717 aa9.6□□□□□ -0.87
AP003900.1-202ENST00000616952 ENOSF1Q7L5Y1 443 aa9.6□□□□□ -0.87
AP003900.1-202ENST00000616952 AMIGO1Q86WK6 493 aa9.6□□□□□ -0.87
AP003900.1-202ENST00000616952 BBS5Q8N3I7 341 aa9.6□□□□□ -0.87
AP003900.1-202ENST00000616952 C3orf56Q8N813 242 aa9.6□□□□□ -0.87
AP003900.1-202ENST00000616952 LINC00301Q8NCQ3 95 aa9.6□□□□□ -0.87
AP003900.1-202ENST00000616952 TMEM35BQ8NCS4 154 aa9.6□□□□□ -0.87
AP003900.1-202ENST00000616952 LPCAT1Q8NF37 534 aa9.6□□□□□ -0.87
AP003900.1-202ENST00000616952 OR52N2Q8NGI0 321 aa9.6□□□□□ -0.87
AP003900.1-202ENST00000616952 C16orf52Q8NHV5 167 aa9.6□□□□□ -0.87
AP003900.1-202ENST00000616952 CENPIQ92674 756 aaPredicted RBP9.6□□□□□ -0.87
AP003900.1-202ENST00000616952 TTC25Q96NG3 672 aa9.6□□□□□ -0.87
AP003900.1-202ENST00000616952 UCN2Q96RP3 112 aa9.6□□□□□ -0.87
AP003900.1-202ENST00000616952 SLC30A3Q99726 388 aa9.6□□□□□ -0.87
AP003900.1-202ENST00000616952 TUBGCP2Q9BSJ2 902 aa9.6□□□□□ -0.87
AP003900.1-202ENST00000616952 ZNF304Q9HCX3 659 aa9.6□□□□□ -0.87
AP003900.1-202ENST00000616952 SPTLC3Q9NUV7 552 aa9.6□□□□□ -0.87
AP003900.1-202ENST00000616952 ZNF701Q9NV72 531 aaPredicted RBP9.6□□□□□ -0.87
AP003900.1-202ENST00000616952 NFKBIL1Q9UBC1 381 aaPredicted RBP9.6□□□□□ -0.87
AP003900.1-202ENST00000616952 HEBP2Q9Y5Z4 205 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms