RNA–Protein interactions for RNA: ENST00000616253.1

AL353770.3-201, humanhuman

TSL 1 (best) BASIC

Gene AL353770.3, Length 1,988 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL353770.3-201ENST00000616253 NEIL2Q969S2 332 aa9.7□□□□□ -0.86
AL353770.3-201ENST00000616253 APOOQ9BUR5 198 aa9.7□□□□□ -0.86
AL353770.3-201ENST00000616253 GID8Q9NWU2 228 aa9.7□□□□□ -0.86
AL353770.3-201ENST00000616253 ASIC5Q9NY37 505 aa9.7□□□□□ -0.86
AL353770.3-201ENST00000616253 GPRC5BQ9NZH0 403 aa9.7□□□□□ -0.86
AL353770.3-201ENST00000616253 LEF1Q9UJU2 399 aaPredicted RBP9.7□□□□□ -0.86
AL353770.3-201ENST00000616253 NDRG2Q9UN36 371 aaKnown RBP9.7□□□□□ -0.86
AL353770.3-201ENST00000616253 SH2B3Q9UQQ2 575 aa9.7□□□□□ -0.86
AL353770.3-201ENST00000616253 TDRKHQ9Y2W6 561 aaKnown RBP9.7□□□□□ -0.86
AL353770.3-201ENST00000616253 CACNB4O00305 520 aaPredicted RBP9.7□□□□□ -0.86
AL353770.3-201ENST00000616253 IFRD1O00458 451 aaPredicted RBP9.7□□□□□ -0.86
AL353770.3-201ENST00000616253 LATO43561 262 aa9.7□□□□□ -0.86
AL353770.3-201ENST00000616253 FKBP6O75344 327 aa9.7□□□□□ -0.86
AL353770.3-201ENST00000616253 CEACAM5P06731 702 aa9.7□□□□□ -0.86
AL353770.3-201ENST00000616253 KELP23276 732 aa9.7□□□□□ -0.86
AL353770.3-201ENST00000616253 PRPH2P23942 346 aa9.7□□□□□ -0.86
AL353770.3-201ENST00000616253 VARSP26640 1264 aaKnown RBP9.7□□□□□ -0.86
AL353770.3-201ENST00000616253 RPL10P27635 214 aaKnown RBP9.7□□□□□ -0.86
AL353770.3-201ENST00000616253 ACSL1P33121 698 aa9.7□□□□□ -0.86
AL353770.3-201ENST00000616253 HNF4AP41235 474 aa9.7□□□□□ -0.86
AL353770.3-201ENST00000616253 CASP2P42575 452 aa9.7□□□□□ -0.86
AL353770.3-201ENST00000616253 PTDSS1P48651 473 aaKnown RBP9.7□□□□□ -0.86
AL353770.3-201ENST00000616253 TPMTP51580 245 aa9.7□□□□□ -0.86
AL353770.3-201ENST00000616253 CLCNKAP51800 687 aa9.7□□□□□ -0.86
AL353770.3-201ENST00000616253 AP2B1P63010 937 aa9.7□□□□□ -0.86
AL353770.3-201ENST00000616253 MS4A2Q01362 244 aa9.7□□□□□ -0.86
AL353770.3-201ENST00000616253 TAP2Q03519 686 aa9.7□□□□□ -0.86
AL353770.3-201ENST00000616253 SLC34A1Q06495 639 aa9.7□□□□□ -0.86
AL353770.3-201ENST00000616253 PCDH1Q08174 1060 aa9.7□□□□□ -0.86
AL353770.3-201ENST00000616253 SFSWAPQ12872 951 aaKnown RBP9.7□□□□□ -0.86
AL353770.3-201ENST00000616253 DDX39BQ13838 428 aaKnown RBP9.7□□□□□ -0.86
AL353770.3-201ENST00000616253 NFYCQ13952 458 aa9.7□□□□□ -0.86
AL353770.3-201ENST00000616253 PAGE3Q5JUK9 113 aa9.7□□□□□ -0.86
AL353770.3-201ENST00000616253 TMEM31Q5JXX7 168 aa9.7□□□□□ -0.86
AL353770.3-201ENST00000616253 PRMT9Q6P2P2 845 aa9.7□□□□□ -0.86
AL353770.3-201ENST00000616253 SUSD1Q6UWL2 747 aa9.7□□□□□ -0.86
AL353770.3-201ENST00000616253 TMPRSS11BQ86T26 416 aa9.7□□□□□ -0.86
AL353770.3-201ENST00000616253 GALNT13Q8IUC8 556 aa9.7□□□□□ -0.86
AL353770.3-201ENST00000616253 LRRC56Q8IYG6 542 aaPredicted RBP9.7□□□□□ -0.86
AL353770.3-201ENST00000616253 WDR20Q8TBZ3 569 aa9.7□□□□□ -0.86
AL353770.3-201ENST00000616253 NUDT8Q8WV74 236 aa9.7□□□□□ -0.86
AL353770.3-201ENST00000616253 RAD51AP1Q96B01 352 aa9.7□□□□□ -0.86
AL353770.3-201ENST00000616253 CMTM7Q96FZ5 175 aa9.7□□□□□ -0.86
AL353770.3-201ENST00000616253 MSANTD3Q96H12 275 aa9.7□□□□□ -0.86
AL353770.3-201ENST00000616253 IL17FQ96PD4 163 aa9.7□□□□□ -0.86
AL353770.3-201ENST00000616253 UHRF1Q96T88 793 aaPredicted RBP9.7□□□□□ -0.86
AL353770.3-201ENST00000616253 GPATCH1Q9BRR8 931 aaKnown RBP9.7□□□□□ -0.86
AL353770.3-201ENST00000616253 TIMM29Q9BSF4 260 aa9.7□□□□□ -0.86
AL353770.3-201ENST00000616253 TACO1Q9BSH4 297 aaKnown RBP9.7□□□□□ -0.86
AL353770.3-201ENST00000616253 SGPP1Q9BX95 441 aa9.7□□□□□ -0.86
AL353770.3-201ENST00000616253 OSGEPL1Q9H4B0 414 aa9.7□□□□□ -0.86
AL353770.3-201ENST00000616253 SGK2Q9HBY8 427 aa9.7□□□□□ -0.86
AL353770.3-201ENST00000616253 S100A14Q9HCY8 104 aa9.7□□□□□ -0.86
AL353770.3-201ENST00000616253 MRPL40Q9NQ50 206 aaKnown RBP9.7□□□□□ -0.86
AL353770.3-201ENST00000616253 CCDC177Q9NQR7 707 aaPredicted RBP9.7□□□□□ -0.86
AL353770.3-201ENST00000616253 TMEM181Q9P2C4 612 aa9.7□□□□□ -0.86
AL353770.3-201ENST00000616253 STOML1Q9UBI4 398 aa9.7□□□□□ -0.86
AL353770.3-201ENST00000616253 MOSPD1Q9UJG1 213 aa9.7□□□□□ -0.86
AL353770.3-201ENST00000616253 SLC17A4Q9Y2C5 497 aa9.7□□□□□ -0.86
AL353770.3-201ENST00000616253 DYRK1BQ9Y463 629 aa9.7□□□□□ -0.86
AL353770.3-201ENST00000616253 KCNE2Q9Y6J6 123 aa9.7□□□□□ -0.86
AL353770.3-201ENST00000616253 CROCCQ5TZA2 2017 aa9.69□□□□□ -0.86
AL353770.3-201ENST00000616253 KANSL1LA0AUZ9 987 aa9.69□□□□□ -0.86
AL353770.3-201ENST00000616253 SERTM1A2A2V5 107 aa9.69□□□□□ -0.86
AL353770.3-201ENST00000616253 KLHL33A6NCF5 533 aa9.69□□□□□ -0.86
AL353770.3-201ENST00000616253 PRORSD1PA6NEY8 169 aa9.69□□□□□ -0.86
AL353770.3-201ENST00000616253 H0YIV9 168 aa9.69□□□□□ -0.86
AL353770.3-201ENST00000616253 MAP3K7O43318 606 aa9.69□□□□□ -0.86
AL353770.3-201ENST00000616253 ANP32DO95626 131 aa9.69□□□□□ -0.86
AL353770.3-201ENST00000616253 RPN2P04844 631 aa9.69□□□□□ -0.86
AL353770.3-201ENST00000616253 C7P10643 843 aa9.69□□□□□ -0.86
AL353770.3-201ENST00000616253 SRFP11831 508 aa9.69□□□□□ -0.86
AL353770.3-201ENST00000616253 BCKDHAP12694 445 aa9.69□□□□□ -0.86
AL353770.3-201ENST00000616253 ANPEPP15144 967 aa9.69□□□□□ -0.86
AL353770.3-201ENST00000616253 NPPBP16860 134 aa9.69□□□□□ -0.86
AL353770.3-201ENST00000616253 GABRG2P18507 467 aa9.69□□□□□ -0.86
AL353770.3-201ENST00000616253 ATXN3P54252 364 aaPredicted RBP9.69□□□□□ -0.86
AL353770.3-201ENST00000616253 FOXM1Q08050 763 aa9.69□□□□□ -0.86
AL353770.3-201ENST00000616253 DMPKQ09013 629 aa9.69□□□□□ -0.86
AL353770.3-201ENST00000616253 CSTF3Q12996 717 aaKnown RBP9.69□□□□□ -0.86
AL353770.3-201ENST00000616253 KIAA0040Q15053 153 aa9.69□□□□□ -0.86
AL353770.3-201ENST00000616253 TLR1Q15399 786 aa9.69□□□□□ -0.86
AL353770.3-201ENST00000616253 USP39Q53GS9 565 aaKnown RBP9.69□□□□□ -0.86
AL353770.3-201ENST00000616253 SAMD4BQ5PRF9 694 aaKnown RBP9.69□□□□□ -0.86
AL353770.3-201ENST00000616253 DUS1LQ6P1R4 473 aaKnown RBP9.69□□□□□ -0.86
AL353770.3-201ENST00000616253 AAGABQ6PD74 315 aa9.69□□□□□ -0.86
AL353770.3-201ENST00000616253 SLCO4C1Q6ZQN7 724 aa9.69□□□□□ -0.86
AL353770.3-201ENST00000616253 Q6ZS52 159 aa9.69□□□□□ -0.86
AL353770.3-201ENST00000616253 MINDY1Q8N5J2 469 aa9.69□□□□□ -0.86
AL353770.3-201ENST00000616253 FLCNQ8NFG4 579 aa9.69□□□□□ -0.86
AL353770.3-201ENST00000616253 OR5K2Q8NHB8 316 aa9.69□□□□□ -0.86
AL353770.3-201ENST00000616253 CLHC1Q8NHS4 586 aa9.69□□□□□ -0.86
AL353770.3-201ENST00000616253 HMGB4Q8WW32 186 aa9.69□□□□□ -0.86
AL353770.3-201ENST00000616253 LRRC58Q96CX6 371 aa9.69□□□□□ -0.86
AL353770.3-201ENST00000616253 APIPQ96GX9 242 aa9.69□□□□□ -0.86
AL353770.3-201ENST00000616253 MTERF1Q99551 399 aaKnown RBP9.69□□□□□ -0.86
AL353770.3-201ENST00000616253 ZBTB18Q99592 522 aa9.69□□□□□ -0.86
AL353770.3-201ENST00000616253 HOPXQ9BPY8 73 aaPredicted RBP9.69□□□□□ -0.86
AL353770.3-201ENST00000616253 DPY30Q9C005 99 aa9.69□□□□□ -0.86
AL353770.3-201ENST00000616253 RMI1Q9H9A7 625 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms