RNA–Protein interactions for RNA: ENST00000616033.4

MSH6-214, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 3,429 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-214ENST00000616033 SNTNA6NMZ2 147 aa12.84□□□□□ -0.35
MSH6-214ENST00000616033 CACNG3O60359 315 aa12.84□□□□□ -0.35
MSH6-214ENST00000616033 HPRP00739 348 aa12.84□□□□□ -0.35
MSH6-214ENST00000616033 ATXN1LP0C7T5 689 aaKnown RBP12.84□□□□□ -0.35
MSH6-214ENST00000616033 GRK4P32298 578 aa12.84□□□□□ -0.35
MSH6-214ENST00000616033 HTR2BP41595 481 aa12.84□□□□□ -0.35
MSH6-214ENST00000616033 HUNKP57058 714 aa12.84□□□□□ -0.35
MSH6-214ENST00000616033 SLAMF1Q13291 335 aa12.84□□□□□ -0.35
MSH6-214ENST00000616033 CBX2Q14781 532 aaPredicted RBP12.84□□□□□ -0.35
MSH6-214ENST00000616033 OR2T5Q6IEZ7 315 aa12.84□□□□□ -0.35
MSH6-214ENST00000616033 TAPT1Q6NXT6 567 aa12.84□□□□□ -0.35
MSH6-214ENST00000616033 SPATA2LQ8IUW3 424 aaPredicted RBP12.84□□□□□ -0.35
MSH6-214ENST00000616033 MSRB3Q8IXL7 192 aa12.84□□□□□ -0.35
MSH6-214ENST00000616033 LINC01465Q8N7H1 131 aa12.84□□□□□ -0.35
MSH6-214ENST00000616033 OR2T29Q8NH02 315 aa12.84□□□□□ -0.35
MSH6-214ENST00000616033 SLC38A4Q969I6 547 aa12.84□□□□□ -0.35
MSH6-214ENST00000616033 RANGRFQ9HD47 186 aaPredicted RBP12.84□□□□□ -0.35
MSH6-214ENST00000616033 C1orf109Q9NX04 203 aa12.84□□□□□ -0.35
MSH6-214ENST00000616033 SIRT5Q9NXA8 310 aa12.84□□□□□ -0.35
MSH6-214ENST00000616033 GPRC5BQ9NZH0 403 aa12.84□□□□□ -0.35
MSH6-214ENST00000616033 SBF1O95248 1867 aa12.83□□□□□ -0.35
MSH6-214ENST00000616033 HHLA1C9JL84 531 aa12.83□□□□□ -0.36
MSH6-214ENST00000616033 FGF10O15520 208 aaPredicted RBP12.83□□□□□ -0.36
MSH6-214ENST00000616033 PKMP14618 531 aaKnown RBP12.83□□□□□ -0.36
MSH6-214ENST00000616033 CTPS1P17812 591 aa12.83□□□□□ -0.36
MSH6-214ENST00000616033 S100A3P33764 101 aa12.83□□□□□ -0.36
MSH6-214ENST00000616033 SLC15A1P46059 708 aa12.83□□□□□ -0.36
MSH6-214ENST00000616033 OR1E2P47887 323 aa12.83□□□□□ -0.36
MSH6-214ENST00000616033 LHX1P48742 406 aa12.83□□□□□ -0.36
MSH6-214ENST00000616033 RAB25P57735 213 aa12.83□□□□□ -0.36
MSH6-214ENST00000616033 MAD2L1BPQ15013 274 aaPredicted RBP12.83□□□□□ -0.36
MSH6-214ENST00000616033 SETMARQ53H47 684 aaPredicted RBP12.83□□□□□ -0.36
MSH6-214ENST00000616033 XKR7Q5GH72 579 aa12.83□□□□□ -0.36
MSH6-214ENST00000616033 COQ5Q5HYK3 327 aa12.83□□□□□ -0.36
MSH6-214ENST00000616033 CACHD1Q5VU97 1274 aa12.83□□□□□ -0.36
MSH6-214ENST00000616033 OR4F3Q6IEY1 312 aa12.83□□□□□ -0.36
MSH6-214ENST00000616033 SUSD1Q6UWL2 747 aa12.83□□□□□ -0.36
MSH6-214ENST00000616033 CAMKK1Q8N5S9 505 aa12.83□□□□□ -0.36
MSH6-214ENST00000616033 OR6K2Q8NGY2 324 aa12.83□□□□□ -0.36
MSH6-214ENST00000616033 ABCB9Q9NP78 766 aa12.83□□□□□ -0.36
MSH6-214ENST00000616033 OSER1Q9NX31 292 aa12.83□□□□□ -0.36
MSH6-214ENST00000616033 TAS2R9Q9NYW1 312 aa12.83□□□□□ -0.36
MSH6-214ENST00000616033 TRIP12Q14669 1992 aaPredicted RBP12.83□□□□□ -0.36
MSH6-214ENST00000616033 LCHNA4D1U4 455 aa12.83□□□□□ -0.36
MSH6-214ENST00000616033 GABRDO14764 452 aa12.83□□□□□ -0.36
MSH6-214ENST00000616033 BNIP3LO60238 219 aa12.83□□□□□ -0.36
MSH6-214ENST00000616033 ULK1O75385 1050 aa12.83□□□□□ -0.36
MSH6-214ENST00000616033 SERPINF2P08697 491 aa12.83□□□□□ -0.36
MSH6-214ENST00000616033 SYT6Q5T7P8 510 aaPredicted RBP12.83□□□□□ -0.36
MSH6-214ENST00000616033 AGAP6Q5VW22 663 aa12.83□□□□□ -0.36
MSH6-214ENST00000616033 PTRHD1Q6GMV3 140 aaKnown RBP12.83□□□□□ -0.36
MSH6-214ENST00000616033 PPTC7Q8NI37 304 aa12.83□□□□□ -0.36
MSH6-214ENST00000616033 RHEBL1Q8TAI7 183 aa12.83□□□□□ -0.36
MSH6-214ENST00000616033 AGAP4Q96P64 663 aa12.83□□□□□ -0.36
MSH6-214ENST00000616033 CDADC1Q9BWV3 514 aa12.83□□□□□ -0.36
MSH6-214ENST00000616033 REEP1Q9H902 201 aa12.83□□□□□ -0.36
MSH6-214ENST00000616033 SP140LQ9H930 580 aa12.83□□□□□ -0.36
MSH6-214ENST00000616033 MOV10Q9HCE1 1003 aaKnown RBP12.83□□□□□ -0.36
MSH6-214ENST00000616033 DCAF13Q9NV06 445 aaKnown RBP12.83□□□□□ -0.36
MSH6-214ENST00000616033 MALT1Q9UDY8 824 aa12.83□□□□□ -0.36
MSH6-214ENST00000616033 MED16Q9Y2X0 877 aa12.83□□□□□ -0.36
MSH6-214ENST00000616033 MROH6A6NGR9 719 aa12.82□□□□□ -0.36
MSH6-214ENST00000616033 METTL15A6NJ78 407 aa12.82□□□□□ -0.36
MSH6-214ENST00000616033 DSCR3O14972 297 aa12.82□□□□□ -0.36
MSH6-214ENST00000616033 NUPL2O15504 423 aaKnown RBP12.82□□□□□ -0.36
MSH6-214ENST00000616033 NDST3O95803 873 aa12.82□□□□□ -0.36
MSH6-214ENST00000616033 PCSK1P29120 753 aa12.82□□□□□ -0.36
MSH6-214ENST00000616033 CCL23P55773 120 aa12.82□□□□□ -0.36
MSH6-214ENST00000616033 TBX4P57082 545 aa12.82□□□□□ -0.36
MSH6-214ENST00000616033 GNG2P59768 71 aa12.82□□□□□ -0.36
MSH6-214ENST00000616033 SLC14A2Q15849 920 aa12.82□□□□□ -0.36
MSH6-214ENST00000616033 MAL2Q969L2 176 aa12.82□□□□□ -0.36
MSH6-214ENST00000616033 PHOX2BQ99453 314 aa12.82□□□□□ -0.36
MSH6-214ENST00000616033 DERL2Q9GZP9 239 aa12.82□□□□□ -0.36
MSH6-214ENST00000616033 POLR1EQ9GZS1 481 aaKnown RBP12.82□□□□□ -0.36
MSH6-214ENST00000616033 MMP27Q9H306 513 aa12.82□□□□□ -0.36
MSH6-214ENST00000616033 NEU3Q9UQ49 428 aa12.82□□□□□ -0.36
MSH6-214ENST00000616033 RLFQ13129 1914 aa12.82□□□□□ -0.36
MSH6-214ENST00000616033 STX7O15400 261 aaKnown RBP12.82□□□□□ -0.36
MSH6-214ENST00000616033 KIAA0513O60268 411 aa12.82□□□□□ -0.36
MSH6-214ENST00000616033 ITGB1P05556 798 aa12.82□□□□□ -0.36
MSH6-214ENST00000616033 CBLP22681 906 aa12.82□□□□□ -0.36
MSH6-214ENST00000616033 TACR1P25103 407 aa12.82□□□□□ -0.36
MSH6-214ENST00000616033 CA5AP35218 305 aa12.82□□□□□ -0.36
MSH6-214ENST00000616033 SLC19A1P41440 591 aa12.82□□□□□ -0.36
MSH6-214ENST00000616033 P2RX3P56373 397 aa12.82□□□□□ -0.36
MSH6-214ENST00000616033 UBXN11Q5T124 520 aa12.82□□□□□ -0.36
MSH6-214ENST00000616033 FAM171A1Q5VUB5 890 aa12.82□□□□□ -0.36
MSH6-214ENST00000616033 ERAP2Q6P179 960 aa12.82□□□□□ -0.36
MSH6-214ENST00000616033 SYCE2Q6PIF2 218 aa12.82□□□□□ -0.36
MSH6-214ENST00000616033 PAMR1Q6UXH9 720 aa12.82□□□□□ -0.36
MSH6-214ENST00000616033 LINGO4Q6UY18 593 aa12.82□□□□□ -0.36
MSH6-214ENST00000616033 ZNF517Q6ZMY9 492 aaPredicted RBP12.82□□□□□ -0.36
MSH6-214ENST00000616033 CCDC71Q8IV32 467 aaPredicted RBP12.82□□□□□ -0.36
MSH6-214ENST00000616033 RGL4Q8IZJ4 473 aa12.82□□□□□ -0.36
MSH6-214ENST00000616033 CYP4Z2PQ8N1L4 340 aa12.82□□□□□ -0.36
MSH6-214ENST00000616033 OR10T2Q8NGX3 314 aa12.82□□□□□ -0.36
MSH6-214ENST00000616033 ARRDC2Q8TBH0 407 aa12.82□□□□□ -0.36
MSH6-214ENST00000616033 DUSP21Q9H596 190 aa12.82□□□□□ -0.36
MSH6-214ENST00000616033 SNTG1Q9NSN8 517 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms