RNA–Protein interactions for RNA: ENST00000613899.4

FAM228B-208, Transcript of family with sequence similarity 228 member B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene FAM228B, Length 1,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228B-208ENST00000613899 CES2O00748 559 aa21.79■■□□□ 1.08
FAM228B-208ENST00000613899 DSCR3O14972 297 aa21.79■■□□□ 1.08
FAM228B-208ENST00000613899 DPM1O60762 260 aa21.79■■□□□ 1.08
FAM228B-208ENST00000613899 PSIP1O75475 530 aaKnown RBP21.79■■□□□ 1.08
FAM228B-208ENST00000613899 CATP04040 527 aaKnown RBP21.79■■□□□ 1.08
FAM228B-208ENST00000613899 ERGP11308 486 aa21.79■■□□□ 1.08
FAM228B-208ENST00000613899 MAGEA3P43357 314 aa21.79■■□□□ 1.08
FAM228B-208ENST00000613899 KLHL38Q2WGJ6 581 aa21.79■■□□□ 1.08
FAM228B-208ENST00000613899 ACSBG2Q5FVE4 666 aa21.79■■□□□ 1.08
FAM228B-208ENST00000613899 NEK10Q6ZWH5 1172 aa21.79■■□□□ 1.08
FAM228B-208ENST00000613899 ATCAYQ86WG3 371 aa21.79■■□□□ 1.08
FAM228B-208ENST00000613899 CLEC1AQ8NC01 280 aa21.79■■□□□ 1.08
FAM228B-208ENST00000613899 OR2A1Q8NGT9 310 aa21.79■■□□□ 1.08
FAM228B-208ENST00000613899 OR9A1PQ8NGU1 263 aa21.79■■□□□ 1.08
FAM228B-208ENST00000613899 CALML6Q8TD86 181 aa21.79■■□□□ 1.08
FAM228B-208ENST00000613899 KCNJ9Q92806 393 aa21.79■■□□□ 1.08
FAM228B-208ENST00000613899 PTERQ96BW5 349 aa21.79■■□□□ 1.08
FAM228B-208ENST00000613899 KLHL42Q9P2K6 505 aa21.79■■□□□ 1.08
FAM228B-208ENST00000613899 PLAAQ9Y263 795 aa21.79■■□□□ 1.08
FAM228B-208ENST00000613899 MAD1L1Q9Y6D9 718 aa21.79■■□□□ 1.08
FAM228B-208ENST00000613899 SPENQ96T58 3664 aaKnown RBP21.79■■□□□ 1.08
FAM228B-208ENST00000613899 NUP210LQ5VU65 1888 aa21.79■■□□□ 1.08
FAM228B-208ENST00000613899 PCM1Q15154 2024 aa21.79■■□□□ 1.08
FAM228B-208ENST00000613899 A0A1W2PPV9 198 aa21.78■■□□□ 1.08
FAM228B-208ENST00000613899 ARHGEF33A8MVX0 844 aa21.78■■□□□ 1.08
FAM228B-208ENST00000613899 KIF5CO60282 957 aa21.78■■□□□ 1.08
FAM228B-208ENST00000613899 SRPX2O60687 465 aaPredicted RBP21.78■■□□□ 1.08
FAM228B-208ENST00000613899 CMPK1P30085 196 aa21.78■■□□□ 1.08
FAM228B-208ENST00000613899 CD97P48960 835 aa21.78■■□□□ 1.08
FAM228B-208ENST00000613899 CLCN7P51798 805 aa21.78■■□□□ 1.08
FAM228B-208ENST00000613899 MLLT10P55197 1068 aa21.78■■□□□ 1.08
FAM228B-208ENST00000613899 ARHGAP19Q14CB8 494 aa21.78■■□□□ 1.08
FAM228B-208ENST00000613899 LONRF1Q17RB8 773 aa21.78■■□□□ 1.08
FAM228B-208ENST00000613899 EEF1AKMT2Q5JPI9 291 aaKnown RBP21.78■■□□□ 1.08
FAM228B-208ENST00000613899 DENND6AQ8IWF6 608 aa21.78■■□□□ 1.08
FAM228B-208ENST00000613899 PPIL6Q8IXY8 311 aa21.78■■□□□ 1.08
FAM228B-208ENST00000613899 NAT8LQ8N9F0 302 aa21.78■■□□□ 1.08
FAM228B-208ENST00000613899 NUDT9Q9BW91 350 aa21.78■■□□□ 1.08
FAM228B-208ENST00000613899 WDR54Q9H977 334 aa21.78■■□□□ 1.08
FAM228B-208ENST00000613899 GRPEL1Q9HAV7 217 aa21.78■■□□□ 1.08
FAM228B-208ENST00000613899 FBXO6Q9NRD1 293 aaPredicted RBP21.78■■□□□ 1.08
FAM228B-208ENST00000613899 FITM1A5D6W6 292 aa21.77■■□□□ 1.08
FAM228B-208ENST00000613899 A6NL46 340 aa21.77■■□□□ 1.08
FAM228B-208ENST00000613899 TTLL8A6PVC2 850 aa21.77■■□□□ 1.08
FAM228B-208ENST00000613899 ZNF839A8K0R7 811 aa21.77■■□□□ 1.08
FAM228B-208ENST00000613899 MYO1CO00159 1063 aa21.77■■□□□ 1.08
FAM228B-208ENST00000613899 CTSVO60911 334 aa21.77■■□□□ 1.08
FAM228B-208ENST00000613899 CNOT3O75175 753 aaKnown RBP21.77■■□□□ 1.08
FAM228B-208ENST00000613899 ONECUT2O95948 504 aa21.77■■□□□ 1.08
FAM228B-208ENST00000613899 ALBP02768 609 aa21.77■■□□□ 1.08
FAM228B-208ENST00000613899 SLC1A2P43004 574 aa21.77■■□□□ 1.08
FAM228B-208ENST00000613899 FASTKQ14296 549 aaKnown RBP21.77■■□□□ 1.08
FAM228B-208ENST00000613899 PPP1R7Q15435 360 aa21.77■■□□□ 1.08
FAM228B-208ENST00000613899 FAM214AQ32MH5 1076 aa21.77■■□□□ 1.08
FAM228B-208ENST00000613899 DCAF10Q5QP82 559 aa21.77■■□□□ 1.08
FAM228B-208ENST00000613899 RNF44Q7L0R7 432 aa21.77■■□□□ 1.08
FAM228B-208ENST00000613899 SMPDL3AQ92484 453 aa21.77■■□□□ 1.08
FAM228B-208ENST00000613899 NACC2Q96BF6 587 aa21.77■■□□□ 1.08
FAM228B-208ENST00000613899 SMAD5Q99717 465 aaKnown RBP21.77■■□□□ 1.08
FAM228B-208ENST00000613899 FAM167BQ9BTA0 163 aa21.77■■□□□ 1.08
FAM228B-208ENST00000613899 SLC22A11Q9NSA0 550 aa21.77■■□□□ 1.08
FAM228B-208ENST00000613899 C20orf96Q9NUD7 363 aaPredicted RBP21.77■■□□□ 1.08
FAM228B-208ENST00000613899 ANKMY1Q9P2S6 941 aa21.77■■□□□ 1.08
FAM228B-208ENST00000613899 GALPQ9UBC7 116 aa21.77■■□□□ 1.08
FAM228B-208ENST00000613899 SNX12Q9UMY4 172 aa21.77■■□□□ 1.08
FAM228B-208ENST00000613899 COMMD10Q9Y6G5 202 aa21.77■■□□□ 1.08
FAM228B-208ENST00000613899 KLHL41O60662 606 aa21.76■■□□□ 1.07
FAM228B-208ENST00000613899 ENO3P13929 434 aaPredicted RBP21.76■■□□□ 1.07
FAM228B-208ENST00000613899 ITGAXP20702 1163 aa21.76■■□□□ 1.07
FAM228B-208ENST00000613899 MCM3P25205 808 aa21.76■■□□□ 1.07
FAM228B-208ENST00000613899 HSD17B2P37059 387 aa21.76■■□□□ 1.07
FAM228B-208ENST00000613899 VSX2P58304 361 aaPredicted RBP21.76■■□□□ 1.07
FAM228B-208ENST00000613899 CTBP1Q13363 440 aa21.76■■□□□ 1.07
FAM228B-208ENST00000613899 NADK2Q4G0N4 442 aa21.76■■□□□ 1.07
FAM228B-208ENST00000613899 VWA5B1Q5TIE3 1220 aa21.76■■□□□ 1.07
FAM228B-208ENST00000613899 OVCH1Q7RTY7 1134 aa21.76■■□□□ 1.07
FAM228B-208ENST00000613899 EFCAB3Q8N7B9 438 aa21.76■■□□□ 1.07
FAM228B-208ENST00000613899 SIGLEC10Q96LC7 697 aa21.76■■□□□ 1.07
FAM228B-208ENST00000613899 SLC26A1Q9H2B4 701 aa21.76■■□□□ 1.07
FAM228B-208ENST00000613899 P4HTMQ9NXG6 502 aa21.76■■□□□ 1.07
FAM228B-208ENST00000613899 NXT1Q9UKK6 140 aaKnown RBP21.76■■□□□ 1.07
FAM228B-208ENST00000613899 FLNCQ14315 2725 aa21.76■■□□□ 1.07
FAM228B-208ENST00000613899 PTPN13Q12923 2485 aa21.75■■□□□ 1.07
FAM228B-208ENST00000613899 A0A0J9YVX5 310 aa21.75■■□□□ 1.07
FAM228B-208ENST00000613899 OR2A25A4D2G3 310 aa21.75■■□□□ 1.07
FAM228B-208ENST00000613899 SORBS2O94875 1100 aaKnown RBP21.75■■□□□ 1.07
FAM228B-208ENST00000613899 UMODP07911 640 aa21.75■■□□□ 1.07
FAM228B-208ENST00000613899 RPA3P35244 121 aaPredicted RBP21.75■■□□□ 1.07
FAM228B-208ENST00000613899 WASHC2DQ5SRD0 308 aa21.75■■□□□ 1.07
FAM228B-208ENST00000613899 RNASEH2BQ5TBB1 312 aaKnown RBP21.75■■□□□ 1.07
FAM228B-208ENST00000613899 PPP1R32Q7Z5V6 425 aa21.75■■□□□ 1.07
FAM228B-208ENST00000613899 AGGF1Q8N302 714 aaeCLIP21.75■■□□□ 1.073e-6■□□□□ 10.7
FAM228B-208ENST00000613899 SERBP1Q8NC51 408 aaKnown RBP eCLIP21.75■■□□□ 1.07
FAM228B-208ENST00000613899 FBXO15Q8NCQ5 510 aaPredicted RBP21.75■■□□□ 1.07
FAM228B-208ENST00000613899 GIMAP7Q8NHV1 300 aa21.75■■□□□ 1.07
FAM228B-208ENST00000613899 GABPB2Q8TAK5 448 aaPredicted RBP21.75■■□□□ 1.07
FAM228B-208ENST00000613899 SLC30A3Q99726 388 aa21.75■■□□□ 1.07
FAM228B-208ENST00000613899 ZFYVE21Q9BQ24 234 aa21.75■■□□□ 1.07
FAM228B-208ENST00000613899 ACAT2Q9BWD1 397 aa21.75■■□□□ 1.07
FAM228B-208ENST00000613899 MRPS30Q9NP92 439 aaKnown RBP21.75■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms