RNA–Protein interactions for RNA: ENST00000613744.4

POLR2J3-220, Transcript of RNA polymerase II subunit J3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene POLR2J3, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-220ENST00000613744 CD1DP15813 335 aa21.39■■□□□ 1.01
POLR2J3-220ENST00000613744 TBX4P57082 545 aa21.39■■□□□ 1.01
POLR2J3-220ENST00000613744 ERVK-8P63133 956 aa21.39■■□□□ 1.01
POLR2J3-220ENST00000613744 IL5RAQ01344 420 aa21.39■■□□□ 1.01
POLR2J3-220ENST00000613744 PRKG2Q13237 762 aa21.39■■□□□ 1.01
POLR2J3-220ENST00000613744 CARTPTQ16568 116 aa21.39■■□□□ 1.01
POLR2J3-220ENST00000613744 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP21.39■■□□□ 1.01
POLR2J3-220ENST00000613744 AMER2Q8N7J2 671 aa21.39■■□□□ 1.01
POLR2J3-220ENST00000613744 SPATA22Q8NHS9 363 aa21.39■■□□□ 1.01
POLR2J3-220ENST00000613744 IPCEF1Q8WWN9 437 aaPredicted RBP21.39■■□□□ 1.01
POLR2J3-220ENST00000613744 WBP2Q969T9 261 aa21.39■■□□□ 1.01
POLR2J3-220ENST00000613744 RIPOR3Q96MK2 946 aa21.39■■□□□ 1.01
POLR2J3-220ENST00000613744 SIK2Q9H0K1 926 aa21.39■■□□□ 1.01
POLR2J3-220ENST00000613744 ACOT13Q9NPJ3 140 aa21.39■■□□□ 1.01
POLR2J3-220ENST00000613744 POLR3BQ9NW08 1133 aaPredicted RBP21.39■■□□□ 1.01
POLR2J3-220ENST00000613744 CCDC59Q9P031 241 aaKnown RBP21.39■■□□□ 1.01
POLR2J3-220ENST00000613744 MKLN1Q9UL63 735 aa21.39■■□□□ 1.01
POLR2J3-220ENST00000613744 TLR6Q9Y2C9 796 aa21.39■■□□□ 1.01
POLR2J3-220ENST00000613744 AP3M1Q9Y2T2 418 aa21.39■■□□□ 1.01
POLR2J3-220ENST00000613744 TRAV19A0A0A6YYK7 116 aa21.38■■□□□ 1.01
POLR2J3-220ENST00000613744 A6NL46 340 aa21.38■■□□□ 1.01
POLR2J3-220ENST00000613744 SNX2O60749 519 aa21.38■■□□□ 1.01
POLR2J3-220ENST00000613744 TRAPPC2P0DI81 140 aa21.38■■□□□ 1.01
POLR2J3-220ENST00000613744 TRAPPC2BP0DI82 140 aa21.38■■□□□ 1.01
POLR2J3-220ENST00000613744 PCNAP12004 261 aa21.38■■□□□ 1.01
POLR2J3-220ENST00000613744 IL1RNP18510 177 aa21.38■■□□□ 1.01
POLR2J3-220ENST00000613744 TGFBR2P37173 567 aa21.38■■□□□ 1.01
POLR2J3-220ENST00000613744 DDOSTP39656 456 aa21.38■■□□□ 1.01
POLR2J3-220ENST00000613744 ETV6P41212 452 aa21.38■■□□□ 1.01
POLR2J3-220ENST00000613744 MASP1P48740 699 aa21.38■■□□□ 1.01
POLR2J3-220ENST00000613744 KCNQ1P51787 676 aa21.38■■□□□ 1.01
POLR2J3-220ENST00000613744 UFM1P61960 85 aa21.38■■□□□ 1.01
POLR2J3-220ENST00000613744 EIF4EBP2Q13542 120 aaPredicted RBP21.38■■□□□ 1.01
POLR2J3-220ENST00000613744 COLEC12Q5KU26 742 aa21.38■■□□□ 1.01
POLR2J3-220ENST00000613744 ATAD3CQ5T2N8 411 aa21.38■■□□□ 1.01
POLR2J3-220ENST00000613744 DLEU7Q6UYE1 221 aa21.38■■□□□ 1.01
POLR2J3-220ENST00000613744 B3GNT8Q7Z7M8 397 aa21.38■■□□□ 1.01
POLR2J3-220ENST00000613744 NPAS3Q8IXF0 933 aa21.38■■□□□ 1.01
POLR2J3-220ENST00000613744 IQCF2Q8IXL9 164 aa21.38■■□□□ 1.01
POLR2J3-220ENST00000613744 CMTM8Q8IZV2 173 aa21.38■■□□□ 1.01
POLR2J3-220ENST00000613744 TTC9Q92623 222 aa21.38■■□□□ 1.01
POLR2J3-220ENST00000613744 HLA-CQ95604 372 aa21.38■■□□□ 1.01
POLR2J3-220ENST00000613744 SLC38A4Q969I6 547 aa21.38■■□□□ 1.01
POLR2J3-220ENST00000613744 PTERQ96BW5 349 aa21.38■■□□□ 1.01
POLR2J3-220ENST00000613744 SLC47A1Q96FL8 570 aa21.38■■□□□ 1.01
POLR2J3-220ENST00000613744 TEX37Q96LM6 180 aa21.38■■□□□ 1.01
POLR2J3-220ENST00000613744 PNMA8CA0A1B0GUJ8 204 aa21.38■■□□□ 1.01
POLR2J3-220ENST00000613744 PDZK1P1A8MUH7 402 aa21.38■■□□□ 1.01
POLR2J3-220ENST00000613744 ZW10O43264 779 aa21.38■■□□□ 1.01
POLR2J3-220ENST00000613744 XPNPEP2O43895 674 aa21.38■■□□□ 1.01
POLR2J3-220ENST00000613744 FKBP9O95302 570 aa21.38■■□□□ 1.01
POLR2J3-220ENST00000613744 MED26O95402 600 aa21.38■■□□□ 1.01
POLR2J3-220ENST00000613744 MAP2K4P45985 399 aa21.38■■□□□ 1.01
POLR2J3-220ENST00000613744 ZNF789Q5FWF6 425 aa21.38■■□□□ 1.01
POLR2J3-220ENST00000613744 BRMS1LQ5PSV4 323 aa21.38■■□□□ 1.01
POLR2J3-220ENST00000613744 UBE2UQ5VVX9 321 aa21.38■■□□□ 1.01
POLR2J3-220ENST00000613744 CAPN13Q6MZZ7 669 aaPredicted RBP21.38■■□□□ 1.01
POLR2J3-220ENST00000613744 SPESP1Q6UW49 350 aa21.38■■□□□ 1.01
POLR2J3-220ENST00000613744 TMEM207Q6UWW9 146 aa21.38■■□□□ 1.01
POLR2J3-220ENST00000613744 RANBP10Q6VN20 620 aa21.38■■□□□ 1.01
POLR2J3-220ENST00000613744 NAT16Q8N8M0 369 aa21.38■■□□□ 1.01
POLR2J3-220ENST00000613744 TBC1D20Q96BZ9 403 aa21.38■■□□□ 1.01
POLR2J3-220ENST00000613744 TFB2MQ9H5Q4 396 aaKnown RBP21.38■■□□□ 1.01
POLR2J3-220ENST00000613744 CENPXA8MT69 81 aa21.37■■□□□ 1.01
POLR2J3-220ENST00000613744 FAM25AB3EWG3 89 aa21.37■■□□□ 1.01
POLR2J3-220ENST00000613744 FAM25CB3EWG5 89 aa21.37■■□□□ 1.01
POLR2J3-220ENST00000613744 FAM25GB3EWG6 89 aa21.37■■□□□ 1.01
POLR2J3-220ENST00000613744 CRCPO75575 148 aa21.37■■□□□ 1.01
POLR2J3-220ENST00000613744 SCELO95171 688 aa21.37■■□□□ 1.01
POLR2J3-220ENST00000613744 CD36P16671 472 aa21.37■■□□□ 1.01
POLR2J3-220ENST00000613744 NAT1P18440 290 aa21.37■■□□□ 1.01
POLR2J3-220ENST00000613744 S100A5P33763 92 aa21.37■■□□□ 1.01
POLR2J3-220ENST00000613744 DCTP40126 519 aa21.37■■□□□ 1.01
POLR2J3-220ENST00000613744 SEPHS1P49903 392 aa21.37■■□□□ 1.01
POLR2J3-220ENST00000613744 TFF2Q03403 129 aa21.37■■□□□ 1.01
POLR2J3-220ENST00000613744 PWP1Q13610 501 aa21.37■■□□□ 1.01
POLR2J3-220ENST00000613744 GDPD3Q7L5L3 318 aa21.37■■□□□ 1.01
POLR2J3-220ENST00000613744 CILP2Q8IUL8 1156 aa21.37■■□□□ 1.01
POLR2J3-220ENST00000613744 UBQLNLQ8IYU4 475 aa21.37■■□□□ 1.01
POLR2J3-220ENST00000613744 MAFAQ8NHW3 353 aaPredicted RBP21.37■■□□□ 1.01
POLR2J3-220ENST00000613744 SUN5Q8TC36 379 aa21.37■■□□□ 1.01
POLR2J3-220ENST00000613744 ZNF599Q96NL3 588 aa21.37■■□□□ 1.01
POLR2J3-220ENST00000613744 GABARAPL1Q9H0R8 117 aa21.37■■□□□ 1.01
POLR2J3-220ENST00000613744 ACTR8Q9H981 624 aa21.37■■□□□ 1.01
POLR2J3-220ENST00000613744 ARNT2Q9HBZ2 717 aa21.37■■□□□ 1.01
POLR2J3-220ENST00000613744 SLAMF8Q9P0V8 285 aa21.37■■□□□ 1.01
POLR2J3-220ENST00000613744 RAPGEFL1Q9UHV5 662 aa21.37■■□□□ 1.01
POLR2J3-220ENST00000613744 TMEFF2Q9UIK5 374 aaPredicted RBP21.37■■□□□ 1.01
POLR2J3-220ENST00000613744 BTRCQ9Y297 605 aa21.37■■□□□ 1.01
POLR2J3-220ENST00000613744 OR2A25A4D2G3 310 aa21.36■■□□□ 1.01
POLR2J3-220ENST00000613744 PRAMEF12O95522 483 aa21.36■■□□□ 1.01
POLR2J3-220ENST00000613744 MSH3P20585 1137 aa21.36■■□□□ 1.01
POLR2J3-220ENST00000613744 HTR3AP46098 478 aa21.36■■□□□ 1.01
POLR2J3-220ENST00000613744 ZFP69Q49AA0 526 aa21.36■■□□□ 1.01
POLR2J3-220ENST00000613744 TPRG1LQ5T0D9 272 aa21.36■■□□□ 1.01
POLR2J3-220ENST00000613744 CNIH3Q8TBE1 160 aa21.36■■□□□ 1.01
POLR2J3-220ENST00000613744 FCRL2Q96LA5 508 aaPredicted RBP21.36■■□□□ 1.01
POLR2J3-220ENST00000613744 MYADMQ96S97 322 aa21.36■■□□□ 1.01
POLR2J3-220ENST00000613744 LTB4R2Q9NPC1 389 aa21.36■■□□□ 1.01
POLR2J3-220ENST00000613744 WBP11Q9Y2W2 641 aaKnown RBP21.36■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms