RNA–Protein interactions for RNA: ENST00000612795.1

CSNK1E-215, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-215ENST00000612795 TPM4P67936 248 aa16.41■□□□□ 0.22
CSNK1E-215ENST00000612795 PMP22Q01453 160 aa16.41■□□□□ 0.22
CSNK1E-215ENST00000612795 MSLNQ13421 630 aaPredicted RBP16.41■□□□□ 0.22
CSNK1E-215ENST00000612795 SF1Q15637 639 aaKnown RBP16.41■□□□□ 0.22
CSNK1E-215ENST00000612795 ABHD17BQ5VST6 288 aa16.41■□□□□ 0.22
CSNK1E-215ENST00000612795 ATG9BQ674R7 924 aa16.41■□□□□ 0.22
CSNK1E-215ENST00000612795 PRMT9Q6P2P2 845 aa16.41■□□□□ 0.22
CSNK1E-215ENST00000612795 PIANPQ8IYJ0 282 aa16.41■□□□□ 0.22
CSNK1E-215ENST00000612795 LMNTD1Q8N9Z9 388 aa16.41■□□□□ 0.22
CSNK1E-215ENST00000612795 LINC01555Q8NAE3 123 aa16.41■□□□□ 0.22
CSNK1E-215ENST00000612795 IMPACTQ9P2X3 320 aa16.41■□□□□ 0.22
CSNK1E-215ENST00000612795 CIDEBQ9UHD4 219 aa16.41■□□□□ 0.22
CSNK1E-215ENST00000612795 FEZ2Q9UHY8 353 aaPredicted RBP16.41■□□□□ 0.22
CSNK1E-215ENST00000612795 MACROD2A1Z1Q3 448 aa16.4■□□□□ 0.22
CSNK1E-215ENST00000612795 OR5H15A6NDH6 313 aa16.4■□□□□ 0.22
CSNK1E-215ENST00000612795 GOLGA6L22H0YM25 854 aa16.4■□□□□ 0.22
CSNK1E-215ENST00000612795 STK10O94804 968 aaKnown RBP16.4■□□□□ 0.22
CSNK1E-215ENST00000612795 MBD3O95983 291 aa16.4■□□□□ 0.22
CSNK1E-215ENST00000612795 CELA2AP08217 269 aa16.4■□□□□ 0.22
CSNK1E-215ENST00000612795 OR56A5P0C7T3 313 aa16.4■□□□□ 0.22
CSNK1E-215ENST00000612795 ITIH4Q14624 930 aa16.4■□□□□ 0.22
CSNK1E-215ENST00000612795 LONRF1Q17RB8 773 aa16.4■□□□□ 0.22
CSNK1E-215ENST00000612795 DNAJC21Q5F1R6 531 aaKnown RBP16.4■□□□□ 0.22
CSNK1E-215ENST00000612795 WASHC2DQ5SRD0 308 aa16.4■□□□□ 0.22
CSNK1E-215ENST00000612795 CCDC181Q5TID7 509 aa16.4■□□□□ 0.22
CSNK1E-215ENST00000612795 RIPOR1Q6ZS17 1223 aa16.4■□□□□ 0.22
CSNK1E-215ENST00000612795 ZNF285Q96NJ3 590 aa16.4■□□□□ 0.22
CSNK1E-215ENST00000612795 RNF32Q9H0A6 362 aa16.4■□□□□ 0.22
CSNK1E-215ENST00000612795 MCCC2Q9HCC0 563 aa16.4■□□□□ 0.22
CSNK1E-215ENST00000612795 GPAMQ9HCL2 828 aa16.4■□□□□ 0.22
CSNK1E-215ENST00000612795 NLE1Q9NVX2 485 aaPredicted RBP16.4■□□□□ 0.22
CSNK1E-215ENST00000612795 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.4■□□□□ 0.221e-6■■□□□ 12.5
CSNK1E-215ENST00000612795 IGHV1-45A0A0A0MS14 117 aa16.39■□□□□ 0.21
CSNK1E-215ENST00000612795 MED26O95402 600 aa16.39■□□□□ 0.21
CSNK1E-215ENST00000612795 MLYCDO95822 493 aa16.39■□□□□ 0.21
CSNK1E-215ENST00000612795 CD1EP15812 388 aa16.39■□□□□ 0.21
CSNK1E-215ENST00000612795 KIR3DL1P43629 444 aa16.39■□□□□ 0.21
CSNK1E-215ENST00000612795 EMP2P54851 167 aa16.39■□□□□ 0.21
CSNK1E-215ENST00000612795 AP2B1P63010 937 aa16.39■□□□□ 0.21
CSNK1E-215ENST00000612795 ZNF33BQ06732 778 aa16.39■□□□□ 0.21
CSNK1E-215ENST00000612795 SPARCL1Q14515 664 aa16.39■□□□□ 0.21
CSNK1E-215ENST00000612795 CDSNQ15517 529 aa16.39■□□□□ 0.21
CSNK1E-215ENST00000612795 ANKRD20A2Q5SQ80 823 aa16.39■□□□□ 0.21
CSNK1E-215ENST00000612795 ANKRD20A1Q5TYW2 823 aa16.39■□□□□ 0.21
CSNK1E-215ENST00000612795 ANKRD20A3Q5VUR7 823 aa16.39■□□□□ 0.21
CSNK1E-215ENST00000612795 PACS1Q6VY07 963 aa16.39■□□□□ 0.21
CSNK1E-215ENST00000612795 DCUN1D3Q8IWE4 304 aa16.39■□□□□ 0.21
CSNK1E-215ENST00000612795 OR2L8Q8NGY9 312 aa16.39■□□□□ 0.21
CSNK1E-215ENST00000612795 CFAP61Q8NHU2 1237 aa16.39■□□□□ 0.21
CSNK1E-215ENST00000612795 IL17FQ96PD4 163 aa16.39■□□□□ 0.21
CSNK1E-215ENST00000612795 PPP1R2P1Q96PQ5 205 aa16.39■□□□□ 0.21
CSNK1E-215ENST00000612795 ALS2CR12Q96Q35 445 aa16.39■□□□□ 0.21
CSNK1E-215ENST00000612795 YIPF2Q9BWQ6 316 aa16.39■□□□□ 0.21
CSNK1E-215ENST00000612795 ZC3H7BQ9UGR2 993 aaKnown RBP16.39■□□□□ 0.21
CSNK1E-215ENST00000612795 SLC39A10Q9ULF5 831 aa16.39■□□□□ 0.21
CSNK1E-215ENST00000612795 A0A0J9YVX5 310 aa16.38■□□□□ 0.21
CSNK1E-215ENST00000612795 IDSB3KWA1 339 aa16.38■□□□□ 0.21
CSNK1E-215ENST00000612795 FAM227AF5H4B4 570 aa16.38■□□□□ 0.21
CSNK1E-215ENST00000612795 F8W8V4 182 aa16.38■□□□□ 0.21
CSNK1E-215ENST00000612795 APOC4-APOC2K7ER74 178 aa16.38■□□□□ 0.21
CSNK1E-215ENST00000612795 FANCGO15287 622 aa16.38■□□□□ 0.21
CSNK1E-215ENST00000612795 SRPX2O60687 465 aaPredicted RBP16.38■□□□□ 0.21
CSNK1E-215ENST00000612795 CTSVO60911 334 aa16.38■□□□□ 0.21
CSNK1E-215ENST00000612795 ZRANB2O95218 330 aaKnown RBP eCLIP16.38■□□□□ 0.21
CSNK1E-215ENST00000612795 APOC2P02655 101 aa16.38■□□□□ 0.21
CSNK1E-215ENST00000612795 EIF2S1P05198 315 aaKnown RBP16.38■□□□□ 0.21
CSNK1E-215ENST00000612795 ERVK-10P10266 1014 aa16.38■□□□□ 0.21
CSNK1E-215ENST00000612795 ITGAMP11215 1152 aa16.38■□□□□ 0.21
CSNK1E-215ENST00000612795 IQCB1Q15051 598 aa16.38■□□□□ 0.21
CSNK1E-215ENST00000612795 MUM1Q2TAK8 710 aa16.38■□□□□ 0.21
CSNK1E-215ENST00000612795 ASTE1Q2TB18 679 aaPredicted RBP16.38■□□□□ 0.21
CSNK1E-215ENST00000612795 DENND5AQ6IQ26 1287 aa16.38■□□□□ 0.21
CSNK1E-215ENST00000612795 NEK10Q6ZWH5 1172 aa16.38■□□□□ 0.21
CSNK1E-215ENST00000612795 LAPTM4BQ86VI4 370 aa16.38■□□□□ 0.21
CSNK1E-215ENST00000612795 CDKL3Q8IVW4 592 aaPredicted RBP16.38■□□□□ 0.21
CSNK1E-215ENST00000612795 CDKN2AIPNLQ96HQ2 116 aa16.38■□□□□ 0.21
CSNK1E-215ENST00000612795 CABS1Q96KC9 395 aa16.38■□□□□ 0.21
CSNK1E-215ENST00000612795 SPOCK3Q9BQ16 436 aa16.38■□□□□ 0.21
CSNK1E-215ENST00000612795 MENTQ9BUN1 341 aa16.38■□□□□ 0.21
CSNK1E-215ENST00000612795 ENAMQ9NRM1 1142 aa16.38■□□□□ 0.21
CSNK1E-215ENST00000612795 TRPC4Q9UBN4 977 aa16.38■□□□□ 0.21
CSNK1E-215ENST00000612795 TEKT2Q9UIF3 430 aa16.38■□□□□ 0.21
CSNK1E-215ENST00000612795 NEU2Q9Y3R4 380 aa16.38■□□□□ 0.21
CSNK1E-215ENST00000612795 IGLV3-12A0A075B6K2 115 aa16.37■□□□□ 0.21
CSNK1E-215ENST00000612795 A0A1W2PQ72 361 aa16.37■□□□□ 0.21
CSNK1E-215ENST00000612795 PRPF4O43172 522 aaKnown RBP eCLIP16.37■□□□□ 0.21
CSNK1E-215ENST00000612795 FKBP9O95302 570 aa16.37■□□□□ 0.21
CSNK1E-215ENST00000612795 NADKO95544 446 aaPredicted RBP16.37■□□□□ 0.21
CSNK1E-215ENST00000612795 HEXBP07686 556 aa16.37■□□□□ 0.21
CSNK1E-215ENST00000612795 MSNP26038 577 aaKnown RBP16.37■□□□□ 0.21
CSNK1E-215ENST00000612795 HSPA14Q0VDF9 509 aa16.37■□□□□ 0.21
CSNK1E-215ENST00000612795 POU6F1Q14863 301 aa16.37■□□□□ 0.21
CSNK1E-215ENST00000612795 ZNF766Q5HY98 468 aa16.37■□□□□ 0.21
CSNK1E-215ENST00000612795 FRMPD2BQ6IN97 320 aa16.37■□□□□ 0.21
CSNK1E-215ENST00000612795 MEX3BQ6ZN04 569 aaKnown RBP16.37■□□□□ 0.21
CSNK1E-215ENST00000612795 BBS12Q6ZW61 710 aa16.37■□□□□ 0.21
CSNK1E-215ENST00000612795 KATNAL2Q8IYT4 538 aa16.37■□□□□ 0.21
CSNK1E-215ENST00000612795 SLC22A15Q8IZD6 547 aa16.37■□□□□ 0.21
CSNK1E-215ENST00000612795 STYXQ8WUJ0 223 aa16.37■□□□□ 0.21
CSNK1E-215ENST00000612795 ZUFSPQ96AP4 578 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms