RNA–Protein interactions for RNA: ENST00000612467.1

PCDHGA3-202, Transcript of protocadherin gamma subfamily A, 3, humanhuman

TSL 2

Gene PCDHGA3, Length 2,712 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-202ENST00000612467 A0A087WXM4 84 aa13.68□□□□□ -0.22
PCDHGA3-202ENST00000612467 ATE1O95260 518 aa13.68□□□□□ -0.22
PCDHGA3-202ENST00000612467 BMP10O95393 424 aa13.68□□□□□ -0.22
PCDHGA3-202ENST00000612467 PARNO95453 639 aaKnown RBP13.68□□□□□ -0.22
PCDHGA3-202ENST00000612467 CPSF4O95639 269 aaKnown RBP13.68□□□□□ -0.22
PCDHGA3-202ENST00000612467 RHOP08100 348 aa13.68□□□□□ -0.22
PCDHGA3-202ENST00000612467 TIMP2P16035 220 aa13.68□□□□□ -0.22
PCDHGA3-202ENST00000612467 EPCAMP16422 314 aa13.68□□□□□ -0.22
PCDHGA3-202ENST00000612467 AGXTP21549 392 aa13.68□□□□□ -0.22
PCDHGA3-202ENST00000612467 NAE1Q13564 534 aa13.68□□□□□ -0.22
PCDHGA3-202ENST00000612467 RAB39AQ14964 217 aa13.68□□□□□ -0.22
PCDHGA3-202ENST00000612467 MEP1AQ16819 746 aa13.68□□□□□ -0.22
PCDHGA3-202ENST00000612467 KCTD21Q4G0X4 260 aa13.68□□□□□ -0.22
PCDHGA3-202ENST00000612467 XKR6Q5GH73 641 aa13.68□□□□□ -0.22
PCDHGA3-202ENST00000612467 USP51Q70EK9 711 aa13.68□□□□□ -0.22
PCDHGA3-202ENST00000612467 GALNT5Q7Z7M9 940 aa13.68□□□□□ -0.22
PCDHGA3-202ENST00000612467 RBM23Q86U06 439 aaKnown RBP13.68□□□□□ -0.22
PCDHGA3-202ENST00000612467 C12orf40Q86WS4 652 aa13.68□□□□□ -0.22
PCDHGA3-202ENST00000612467 RASGEF1AQ8N9B8 481 aa13.68□□□□□ -0.22
PCDHGA3-202ENST00000612467 C12orf43Q96C57 262 aaKnown RBP13.68□□□□□ -0.22
PCDHGA3-202ENST00000612467 ISOC1Q96CN7 298 aa13.68□□□□□ -0.22
PCDHGA3-202ENST00000612467 ZFYVE19Q96K21 471 aa13.68□□□□□ -0.22
PCDHGA3-202ENST00000612467 REXO4Q9GZR2 422 aaKnown RBP13.68□□□□□ -0.22
PCDHGA3-202ENST00000612467 ADNPQ9H2P0 1102 aa13.68□□□□□ -0.22
PCDHGA3-202ENST00000612467 PKD2L2Q9NZM6 624 aa13.68□□□□□ -0.22
PCDHGA3-202ENST00000612467 ERVW-1Q9UQF0 538 aa13.68□□□□□ -0.22
PCDHGA3-202ENST00000612467 PPIL1Q9Y3C6 166 aa13.68□□□□□ -0.22
PCDHGA3-202ENST00000612467 DYTNA2CJ06 578 aa13.67□□□□□ -0.22
PCDHGA3-202ENST00000612467 K7ESM1 405 aa13.67□□□□□ -0.22
PCDHGA3-202ENST00000612467 NUAK1O60285 661 aa13.67□□□□□ -0.22
PCDHGA3-202ENST00000612467 ZNF682O95780 498 aa13.67□□□□□ -0.22
PCDHGA3-202ENST00000612467 ADH1AP07327 375 aa13.67□□□□□ -0.22
PCDHGA3-202ENST00000612467 THRBP10828 461 aa13.67□□□□□ -0.22
PCDHGA3-202ENST00000612467 HLA-EP13747 358 aa13.67□□□□□ -0.22
PCDHGA3-202ENST00000612467 NR4A1P22736 598 aa13.67□□□□□ -0.22
PCDHGA3-202ENST00000612467 CDK9P50750 372 aaKnown RBP13.67□□□□□ -0.22
PCDHGA3-202ENST00000612467 GZMMP51124 257 aa13.67□□□□□ -0.22
PCDHGA3-202ENST00000612467 ALDH3A2P51648 485 aa13.67□□□□□ -0.22
PCDHGA3-202ENST00000612467 CLDN8P56748 225 aa13.67□□□□□ -0.22
PCDHGA3-202ENST00000612467 IL1RL1Q01638 556 aa13.67□□□□□ -0.22
PCDHGA3-202ENST00000612467 VAC14Q08AM6 782 aa13.67□□□□□ -0.22
PCDHGA3-202ENST00000612467 MAD2L1Q13257 205 aaPredicted RBP13.67□□□□□ -0.22
PCDHGA3-202ENST00000612467 DYNC1I2Q13409 638 aaKnown RBP13.67□□□□□ -0.22
PCDHGA3-202ENST00000612467 SPATS1Q496A3 300 aa13.67□□□□□ -0.22
PCDHGA3-202ENST00000612467 FRG2Q64ET8 278 aa13.67□□□□□ -0.22
PCDHGA3-202ENST00000612467 NOXRED1Q6NXP6 359 aa13.67□□□□□ -0.22
PCDHGA3-202ENST00000612467 GPR156Q8NFN8 814 aa13.67□□□□□ -0.22
PCDHGA3-202ENST00000612467 MRGPRX3Q96LB0 322 aa13.67□□□□□ -0.22
PCDHGA3-202ENST00000612467 FRG2BQ96QU4 278 aa13.67□□□□□ -0.22
PCDHGA3-202ENST00000612467 OR4K3Q96R72 315 aa13.67□□□□□ -0.22
PCDHGA3-202ENST00000612467 MBOAT4Q96T53 435 aa13.67□□□□□ -0.22
PCDHGA3-202ENST00000612467 CPEB1Q9BZB8 566 aaKnown RBP13.67□□□□□ -0.22
PCDHGA3-202ENST00000612467 DNAJC11Q9NVH1 559 aa13.67□□□□□ -0.22
PCDHGA3-202ENST00000612467 PCDHGA8Q9Y5G5 932 aa13.67□□□□□ -0.22
PCDHGA3-202ENST00000612467 AMD1P17707 334 aa13.67□□□□□ -0.22
PCDHGA3-202ENST00000612467 CD247P20963 164 aa13.67□□□□□ -0.22
PCDHGA3-202ENST00000612467 RECQLP46063 649 aaPredicted RBP13.67□□□□□ -0.22
PCDHGA3-202ENST00000612467 IRF8Q02556 426 aa13.67□□□□□ -0.22
PCDHGA3-202ENST00000612467 GBX1Q14549 363 aa13.67□□□□□ -0.22
PCDHGA3-202ENST00000612467 ARHGEF6Q15052 776 aa13.67□□□□□ -0.22
PCDHGA3-202ENST00000612467 BORAQ6PGQ7 559 aa13.67□□□□□ -0.22
PCDHGA3-202ENST00000612467 GRASPQ7Z6J2 395 aaPredicted RBP13.67□□□□□ -0.22
PCDHGA3-202ENST00000612467 VTCN1Q7Z7D3 282 aa13.67□□□□□ -0.22
PCDHGA3-202ENST00000612467 ZDHHC13Q8IUH4 622 aa13.67□□□□□ -0.22
PCDHGA3-202ENST00000612467 GORASP2Q9H8Y8 452 aa13.67□□□□□ -0.22
PCDHGA3-202ENST00000612467 SH2B3Q9UQQ2 575 aa13.67□□□□□ -0.22
PCDHGA3-202ENST00000612467 GFYI3L273 518 aa13.66□□□□□ -0.22
PCDHGA3-202ENST00000612467 hCG_2039718K7EN88 272 aa13.66□□□□□ -0.22
PCDHGA3-202ENST00000612467 RFXANKO14593 260 aa13.66□□□□□ -0.22
PCDHGA3-202ENST00000612467 HS6ST1O60243 411 aa13.66□□□□□ -0.22
PCDHGA3-202ENST00000612467 NUDT7P0C024 238 aa13.66□□□□□ -0.22
PCDHGA3-202ENST00000612467 CBSLP0DN79 551 aa13.66□□□□□ -0.22
PCDHGA3-202ENST00000612467 CYP4B1P13584 511 aa13.66□□□□□ -0.22
PCDHGA3-202ENST00000612467 CBSP35520 551 aa13.66□□□□□ -0.22
PCDHGA3-202ENST00000612467 PRMT2P55345 433 aa13.66□□□□□ -0.22
PCDHGA3-202ENST00000612467 DOC2AQ14183 400 aa13.66□□□□□ -0.22
PCDHGA3-202ENST00000612467 UGT8Q16880 541 aa13.66□□□□□ -0.22
PCDHGA3-202ENST00000612467 CTU2Q2VPK5 515 aaKnown RBP13.66□□□□□ -0.22
PCDHGA3-202ENST00000612467 TMEM259Q4ZIN3 620 aa13.66□□□□□ -0.22
PCDHGA3-202ENST00000612467 CCDC149Q6ZUS6 474 aa13.66□□□□□ -0.22
PCDHGA3-202ENST00000612467 LRRC70Q7Z2Q7 622 aa13.66□□□□□ -0.22
PCDHGA3-202ENST00000612467 C2orf73Q8N5S3 287 aaPredicted RBP13.66□□□□□ -0.22
PCDHGA3-202ENST00000612467 SLC29A3Q9BZD2 475 aa13.66□□□□□ -0.22
PCDHGA3-202ENST00000612467 CXorf21Q9HAI6 301 aa13.66□□□□□ -0.22
PCDHGA3-202ENST00000612467 SNX6Q9UNH7 406 aa13.66□□□□□ -0.22
PCDHGA3-202ENST00000612467 ABCG2Q9UNQ0 655 aa13.66□□□□□ -0.22
PCDHGA3-202ENST00000612467 SAP18O00422 153 aaKnown RBP13.66□□□□□ -0.22
PCDHGA3-202ENST00000612467 MAN1A2O60476 641 aa13.66□□□□□ -0.22
PCDHGA3-202ENST00000612467 TULP3O75386 442 aa13.66□□□□□ -0.22
PCDHGA3-202ENST00000612467 E2F6O75461 281 aa13.66□□□□□ -0.22
PCDHGA3-202ENST00000612467 SLC16A8O95907 504 aa13.66□□□□□ -0.22
PCDHGA3-202ENST00000612467 TIMP1P01033 207 aa13.66□□□□□ -0.22
PCDHGA3-202ENST00000612467 C8GP07360 202 aa13.66□□□□□ -0.22
PCDHGA3-202ENST00000612467 PPM1AP35813 382 aa13.66□□□□□ -0.22
PCDHGA3-202ENST00000612467 TUBA4AP68366 448 aa13.66□□□□□ -0.22
PCDHGA3-202ENST00000612467 ADRM1Q16186 407 aa13.66□□□□□ -0.22
PCDHGA3-202ENST00000612467 ZCCHC8Q6NZY4 707 aaKnown RBP13.66□□□□□ -0.22
PCDHGA3-202ENST00000612467 ZNF621Q6ZSS3 439 aa13.66□□□□□ -0.22
PCDHGA3-202ENST00000612467 THOC6Q86W42 341 aaKnown RBP13.66□□□□□ -0.22
PCDHGA3-202ENST00000612467 CACUL1Q86Y37 369 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms